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2A6E
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CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME
Descriptor:DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ...
Authors:Artsimovitch, I., Vassylyeva, M.N., Svetlov, D., Svetlov, V., Perederina, A., Igarashi, N., Matsugaki, N., Wakatsuki, S., Tahirov, T.H., Vassylyev, D.G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-02
Release date:2005-09-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Allosteric modulation of the RNA polymerase catalytic reaction is an essential component of transcription control by rifamycins.
Cell(Cambridge,Mass.), 122, 2005
2A68
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CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH ANTIBIOTIC RIFABUTIN
Descriptor:DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ...
Authors:Artsimovitch, I., Vassylyeva, M.N., Svetlov, D., Svetlov, V., Perederina, A., Igarashi, N., Matsugaki, N., Wakatsuki, S., Tahirov, T.H., Vassylyev, D.G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-01
Release date:2005-09-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Allosteric modulation of the RNA polymerase catalytic reaction is an essential component of transcription control by rifamycins.
Cell(Cambridge,Mass.), 122, 2005
2A69
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CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH ANTIBIOTIC RIFAPENTIN
Descriptor:DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ...
Authors:Artsimovitch, I., Vassylyeva, M.N., Svetlov, D., Svetlov, V., Perederina, A., Igarashi, N., Matsugaki, N., Wakatsuki, S., Tahirov, T.H., Vassylyev, D.G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-02
Release date:2005-09-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Allosteric modulation of the RNA polymerase catalytic reaction is an essential component of transcription control by rifamycins.
Cell(Cambridge,Mass.), 122, 2005
1TJL
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CRYSTAL STRUCTURE OF TRANSCRIPTION FACTOR DKSA FROM E. COLI
Descriptor:DnaK suppressor protein, ZINC ION
Authors:Perederina, A., Svetlov, V., Vassylyeva, M.N., Artsimovitch, I., Yokoyama, S., Vassylyev, D.G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-06-06
Release date:2004-09-07
Last modified:2014-04-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Regulation through the secondary channel--structural framework for ppGpp-DksA synergism during transcription
Cell(Cambridge,Mass.), 118, 2004
2BE5
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CRYSTAL STRUCTURE OF THE T. THERMOPHILUS RNA POLYMERASE HOLOENZYME IN COMPLEX WITH INHIBITOR TAGETITOXIN
Descriptor:DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ...
Authors:Vassylyev, D.G., Svetlov, V., Vassylyeva, M.N., Perederina, A., Igarashi, N., Matsugaki, N., Wakatsuki, S., Artsimovitch, I., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-10-22
Release date:2005-11-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for transcription inhibition by tagetitoxin
Nat.Struct.Mol.Biol., 12, 2005
2EUL
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STRUCTURE OF THE TRANSCRIPTION FACTOR GFH1.
Descriptor:anti-cleavage anti-GreA transcription factor Gfh1, ZINC ION
Authors:Symersky, J., Perederina, A., Vassylyeva, M.N., Svetlov, V., Artsimovitch, I., Vassylyev, D.G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-10-28
Release date:2005-11-15
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Regulation through the RNA Polymerase Secondary Channel: STRUCTURAL AND FUNCTIONAL VARIABILITY OF THE COILED-COIL TRANSCRIPTION FACTORS.
J.Biol.Chem., 281, 2006
2OUG
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CRYSTAL STRUCTURE OF THE RFAH TRANSCRIPTION FACTOR AT 2.1A RESOLUTION
Descriptor:Transcriptional activator rfaH
Authors:Vassylyev, D.G., Vassylyeva, M.N., Svetlov, V., Artsimovitch, I.
Deposit date:2007-02-10
Release date:2007-05-01
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for converting a general transcription factor into an operon-specific virulence regulator.
Mol.Cell, 26, 2007
2P4V
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CRYSTAL STRUCTURE OF THE TRANSCRIPT CLEAVAGE FACTOR, GREB AT 2.6A RESOLUTION
Descriptor:Transcription elongation factor greB
Authors:Vassylyeva, M.N., Svetlov, V., Dearborn, A.D., Klyuyev, S., Artsimovitch, I., Vassylyev, D.G.
Deposit date:2007-03-13
Release date:2008-01-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The carboxy-terminal coiled-coil of the RNA polymerase beta'-subunit is the main binding site for Gre factors.
Embo Rep., 8, 2007
4WQS
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THERMUS THERMOPHILUS RNA POLYMERASE BACKTRACKED COMPLEX
Descriptor:DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Murayama, Y., Sekine, S., Yokoyama, S.
Deposit date:2014-10-22
Release date:2015-02-18
Last modified:2015-09-16
Method:X-RAY DIFFRACTION (4.306 Å)
Cite:The Ratcheted and Ratchetable Structural States of RNA Polymerase Underlie Multiple Transcriptional Functions.
Mol.Cell, 57, 2015
4WQT
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THERMUS THERMOPHILUS RNA POLYMERASE COMPLEXED WITH AN RNA CLEAVAGE STIMULATING FACTOR (A GREA/GFH1 CHIMERIC PROTEIN)
Descriptor:DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Murayama, Y., Sekine, S., Yokoyama, S.
Deposit date:2014-10-22
Release date:2015-02-18
Method:X-RAY DIFFRACTION (4.4 Å)
Cite:The Ratcheted and Ratchetable Structural States of RNA Polymerase Underlie Multiple Transcriptional Functions.
Mol.Cell, 57, 2015
6AWB
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STRUCTURE OF 30S RIBOSOMAL SUBUNIT AND RNA POLYMERASE COMPLEX IN NON-ROTATED STATE
Descriptor:16S rRNA, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Demo, G., Rasouly, A., Vasilyev, N., Loveland, A.B., Diaz-Avalos, R., Grigorieff, N., Nudler, E., Korostelev, A.A.
Deposit date:2017-09-05
Release date:2017-10-18
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Structure of RNA polymerase bound to ribosomal 30S subunit.
Elife, 6, 2017
6AWC
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STRUCTURE OF 30S RIBOSOMAL SUBUNIT AND RNA POLYMERASE COMPLEX IN ROTATED STATE
Descriptor:16S rRNA, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Demo, G., Rasouly, A., Vasilyev, N., Loveland, A.B., Diaz-Avalos, R., Grigorieff, N., Nudler, E., Korostelev, A.A.
Deposit date:2017-09-05
Release date:2017-10-18
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (7.9 Å)
Cite:Structure of RNA polymerase bound to ribosomal 30S subunit.
Elife, 6, 2017
6AWD
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STRUCTURE OF 30S (S1 DEPLETED) RIBOSOMAL SUBUNIT AND RNA POLYMERASE COMPLEX
Descriptor:16S rRNA, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Demo, G., Rasouly, A., Vasilyev, N., Loveland, A.B., Diaz-Avalos, R., Grigorieff, N., Nudler, E., Korostelev, A.A.
Deposit date:2017-09-05
Release date:2017-10-18
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (8.1 Å)
Cite:Structure of RNA polymerase bound to ribosomal 30S subunit.
Elife, 6, 2017
6CDD
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NPL4 ZINC FINGER AND MPN DOMAINS (CHAETOMIUM THERMOPHILUM)
Descriptor:Npl4 zinc finger, ZINC ION
Authors:Bodnar, N.O., Rapoport, T.A.
Deposit date:2018-02-08
Release date:2018-07-04
Last modified:2018-07-25
Method:X-RAY DIFFRACTION (2.582337 Å)
Cite:Structure of the Cdc48 ATPase with its ubiquitin-binding cofactor Ufd1-Npl4.
Nat. Struct. Mol. Biol., 25, 2018
6CHS
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CDC48-NPL4 COMPLEX IN THE PRESENCE OF ATP-GAMMA-S
Descriptor:Npl4, Putative cell division control protein, ZINC ION, ...
Authors:Kim, K.H., Bodnar, N.O., Walz, T., Rapoport, T.A.
Deposit date:2018-02-22
Release date:2018-07-04
Last modified:2018-07-25
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure of the Cdc48 ATPase with its ubiquitin-binding cofactor Ufd1-Npl4.
Nat. Struct. Mol. Biol., 25, 2018