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1P4C
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BU of 1p4c by Molmil
High Resolution Structure of Oxidized Active Mutant of (S)-Mandelate Dehydrogenase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN MONONUCLEOTIDE, L(+)-Mandelate Dehydrogenase, ...
Authors:Sukumar, N, Mitra, B, Mathews, F.S.
Deposit date:2003-04-22
Release date:2003-10-28
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:High Resolution Structures of an Oxidized and Reduced Flavoprotein: THE WATER SWITCH IN A SOLUBLE FORM OF (S)-MANDELATE DEHYDROGENASE
J.Biol.Chem., 279, 2004
1P5B
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BU of 1p5b by Molmil
High Resolution Structure of Reduced Active Mutant of (S)-Mandelate Dehydrogenase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN MONONUCLEOTIDE, L(+)-Mandelate Dehydrogenase, ...
Authors:Sukumar, N, Mitra, B, Mathews, F.S.
Deposit date:2003-04-25
Release date:2003-10-28
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:High resolution structures of an oxidized and reduced flavoprotein. The water switch in a soluble form of (S)-mandelate dehydrogenase
J.Biol.Chem., 279, 2004
6BFG
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BU of 6bfg by Molmil
Crystal structure of monotopic membrane protein (S)-mandelate dehydrogenase
Descriptor: (S)-mandelate dehydrogenase, 1,2-ETHANEDIOL, CITRIC ACID, ...
Authors:Sukumar, N.
Deposit date:2017-10-26
Release date:2018-08-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the monotopic membrane protein (S)-mandelate dehydrogenase at 2.2 angstrom resolution.
Biochimie, 154, 2018
2A85
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BU of 2a85 by Molmil
Crystal Structure of the G81A mutant of the Active Chimera of (S)-Mandelate Dehydrogenase in complex with its substrate 2-hydroxyoctanoate
Descriptor: (2S)-2-HYDROXYOCTANOIC ACID, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN MONONUCLEOTIDE, ...
Authors:Sukumar, N, Xu, Y, Mitra, B, Mathews, F.S.
Deposit date:2005-07-07
Release date:2006-07-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of the G81A mutant form of the active chimera of (S)-mandelate dehydrogenase and its complex with two of its substrates.
Acta Crystallogr.,Sect.D, 65, 2009
2A7N
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Crystal Structure of the G81A mutant of the Active Chimera of (S)-Mandelate Dehydrogenase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN MONONUCLEOTIDE, L(+)-mandelate dehydrogenase
Authors:Sukumar, N, Xu, Y, Mitra, B, Mathews, F.S.
Deposit date:2005-07-05
Release date:2006-07-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of the G81A mutant form of the active chimera of (S)-mandelate dehydrogenase and its complex with two of its substrates
Acta Crystallogr.,Sect.D, 65, 2009
2A7P
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BU of 2a7p by Molmil
Crystal Structure of the G81A mutant of the Active Chimera of (S)-Mandelate Dehydrogenase in complex with its substrate 3-indolelactate
Descriptor: (S)-Mandelate Dehydrogenase, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-(INDOL-3-YL) LACTATE, ...
Authors:Sukumar, N, Xu, Y, Mitra, B, Mathews, F.S.
Deposit date:2005-07-05
Release date:2006-07-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of the G81A mutant form of the active chimera of (S)-mandelate dehydrogenase and its complex with two of its substrates.
Acta Crystallogr.,Sect.D, 65, 2009
3RYM
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BU of 3rym by Molmil
Structure of Oxidized M98K mutant of Amicyanin
Descriptor: Amicyanin, ZINC ION
Authors:Sukumar, N, Davidson, V.L.
Deposit date:2011-05-11
Release date:2011-11-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7039 Å)
Cite:Replacement of the axial copper ligand methionine with lysine in amicyanin converts it to a zinc-binding protein that no longer binds copper.
J.Inorg.Biochem., 105, 2011
2H47
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BU of 2h47 by Molmil
Crystal Structure of an Electron Transfer Complex Between Aromatic Amine Dephydrogenase and Azurin from Alcaligenes Faecalis (Form 1)
Descriptor: Aromatic Amine Dehydrogenase, Azurin, COPPER (II) ION
Authors:Sukumar, N, Chen, Z, Leys, D, Scrutton, N.S, Ferrati, D, Merli, A, Rossi, G.L, Bellamy, H.D, Chistoserdov, A, Davidson, V.L, Mathews, F.S.
Deposit date:2006-05-23
Release date:2006-11-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of an Electron Transfer Complex between Aromatic Amine Dehydrogenase and Azurin from Alcaligenes faecalis.
Biochemistry, 45, 2006
2H3X
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Crystal Structure of an Electron Transfer Complex Between Aromatic Amine Dehydrogenase and Azurin from Alcaligenes Faecalis (Form 3)
Descriptor: Aromatic Amine Dehydrogenase, Azurin, COPPER (II) ION
Authors:Sukumar, N, Chen, Z, Leys, D, Scrutton, N.S, Ferrati, D, Merli, A, Rossi, G.L, Bellamy, H.D, Chistoserdov, A, Davidson, V.L, Mathews, F.S.
Deposit date:2006-05-23
Release date:2006-11-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of an Electron Transfer Complex between Aromatic Amine Dehydrogenase and Azurin from Alcaligenes faecalis.
Biochemistry, 45, 2006
2IAA
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Crystal Structure of an Electron Transfer Complex Between Aromatic Amine Dephydrogenase and Azurin from Alcaligenes Faecalis (Form 2)
Descriptor: Aromatic Amine Dehydrogenase, Azurin, COPPER (II) ION
Authors:Sukumar, N, Chen, Z, Leys, D, Scrutton, N.S, Ferrati, D, Merli, A, Rossi, G.L, Bellamy, H.D, Chistoserdov, A, Davidson, V.L, Mathews, F.S.
Deposit date:2006-09-07
Release date:2006-11-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of an Electron Transfer Complex between Aromatic Amine Dehydrogenase and Azurin from Alcaligenes faecalis.
Biochemistry, 45, 2006
3L45
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A Joint Neutron and X-ray structure of Oxidized Amicyanin
Descriptor: Amicyanin, COPPER (II) ION
Authors:Sukumar, N, Mathews, F.S, Langan, P, Davidson, V.L.
Deposit date:2009-12-18
Release date:2010-04-28
Last modified:2023-09-13
Method:NEUTRON DIFFRACTION (1.8 Å), X-RAY DIFFRACTION
Cite:A joint x-ray and neutron study on amicyanin reveals the role of protein dynamics in electron transfer.
Proc.Natl.Acad.Sci.USA, 107, 2010
3GIY
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BU of 3giy by Molmil
Crystal Structures of the G81A Mutant of the Active Chimera of (S)-Mandelate Dehydrogenase and its Complex with Two of its Substrates
Descriptor: (S)-mandelate dehydrogenase, Peroxisomal (S)-2-hydroxy-acid oxidase, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Sukumar, N, Dewanti, A, Merli, A, Rossi, G.L, Mitra, B, Mathews, F.S.
Deposit date:2009-03-06
Release date:2009-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of the G81A mutant form of the active chimera of (S)-mandelate dehydrogenase and its complex with two of its substrates.
Acta Crystallogr.,Sect.D, 65, 2009
1HSX
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LYSOZYME GROWN AT BASIC PH AND ITS LOW HUMIDITY VARIANT
Descriptor: LYSOZYME
Authors:Sukumar, N, Biswal, B.K, Vijayan, M.
Deposit date:1998-06-04
Release date:1998-08-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of orthorhombic lysozyme grown at basic pH and its low-humidity variant.
Acta Crystallogr.,Sect.D, 55, 1999
1HSW
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BU of 1hsw by Molmil
LYSOZYME (MUCOPEPTIDE N-ACETYLMURAMYL HYDROLASE)
Descriptor: LYSOZYME
Authors:Sukumar, N, Biswal, B.K, Vijayan, M.
Deposit date:1998-06-04
Release date:1998-08-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of orthorhombic lysozyme grown at basic pH and its low-humidity variant.
Acta Crystallogr.,Sect.D, 55, 1999
3PLY
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BU of 3ply by Molmil
Structure of Oxidized P96G Mutant of Amicyanin
Descriptor: Amicyanin, COPPER (II) ION, PHOSPHATE ION, ...
Authors:Sukumar, N, Davidson, V.L.
Deposit date:2010-11-15
Release date:2011-02-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Proline 96 of the copper ligand loop of amicyanin regulates electron transfer from methylamine dehydrogenase by positioning other residues at the protein-protein interface.
Biochemistry, 50, 2011
4P5S
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BU of 4p5s by Molmil
Structure of reduced W45Y mutant of amicyanin
Descriptor: Amicyanin, COPPER (I) ION
Authors:Sukumar, N, Davidson, V.L.
Deposit date:2014-03-19
Release date:2014-04-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:The sole tryptophan of amicyanin enhances its thermal stability but does not influence the electronic properties of the type 1 copper site.
Arch.Biochem.Biophys., 550-551, 2014
4P5R
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BU of 4p5r by Molmil
Structure of oxidized W45Y mutant of amicyanin
Descriptor: Amicyanin, COPPER (II) ION, SODIUM ION
Authors:Sukumar, N, Davidson, V.L.
Deposit date:2014-03-19
Release date:2014-04-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:The sole tryptophan of amicyanin enhances its thermal stability but does not influence the electronic properties of the type 1 copper site.
Arch.Biochem.Biophys., 550-551, 2014
1HUV
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BU of 1huv by Molmil
CRYSTAL STRUCTURE OF A SOLUBLE MUTANT OF THE MEMBRANE-ASSOCIATED (S)-MANDELATE DEHYDROGENASE FROM PSEUDOMONAS PUTIDA AT 2.15A RESOLUTION
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN MONONUCLEOTIDE, L(+)-MANDELATE DEHYDROGENASE, ...
Authors:Mathews, F.S, Sukumar, N.
Deposit date:2001-01-04
Release date:2001-09-19
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of an active soluble mutant of the membrane-associated (S)-mandelate dehydrogenase.
Biochemistry, 40, 2001
3IE9
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BU of 3ie9 by Molmil
Structure of oxidized M98L mutant of amicyanin
Descriptor: ACETATE ION, Amicyanin, CHLORIDE ION, ...
Authors:Sukumar, N, Davidson, V.L.
Deposit date:2009-07-22
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Defining the role of the axial ligand of the type 1 copper site in amicyanin by replacement of methionine with leucine.
Biochemistry, 48, 2009
3IEA
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BU of 3iea by Molmil
Structure of reduced M98L mutant of amicyanin
Descriptor: ACETATE ION, Amicyanin, CHLORIDE ION, ...
Authors:Sukumar, N, Davidson, V.L.
Deposit date:2009-07-22
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Defining the role of the axial ligand of the type 1 copper site in amicyanin by replacement of methionine with leucine.
Biochemistry, 48, 2009
1F0W
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BU of 1f0w by Molmil
CRYSTAL STRUCTURE OF ORTHORHOMBIC LYSOZYME GROWN AT PH 6.5
Descriptor: LYSOZYME
Authors:Biswal, B.K, Sukumar, N, Vijayan, M.
Deposit date:2000-05-17
Release date:2000-06-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Hydration, mobility and accessibility of lysozyme: structures of a pH 6.5 orthorhombic form and its low-humidity variant and a comparative study involving 20 crystallographically independent molecules.
Acta Crystallogr.,Sect.D, 56, 2000
1F10
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BU of 1f10 by Molmil
CRYSTAL STRUCTURE OF ORTHORHOMBIC LYSOZYME GROWN AT PH 6.5 AT 88% RELATIVE HUMIDITY
Descriptor: LYSOZYME
Authors:Biswal, B.K, Sukumar, N, Vijayan, M.
Deposit date:2000-05-18
Release date:2000-06-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Hydration, mobility and accessibility of lysozyme: structures of a pH 6.5 orthorhombic form and its low-humidity variant and a comparative study involving 20 crystallographically independent molecules.
Acta Crystallogr.,Sect.D, 56, 2000
6CAN
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BU of 6can by Molmil
Prolyl oligopeptidase mutant S477C from Pyrococcus furiosus
Descriptor: CHLORIDE ION, Prolyl endopeptidase
Authors:Ellis-Guardiola, K, Lewis, J.C, Sukumar, N.
Deposit date:2018-01-31
Release date:2019-02-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure and Conformational Dynamics of Pyrococcus furiosus Prolyl Oligopeptidase.
Biochemistry, 58, 2019
5T88
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Prolyl oligopeptidase from Pyrococcus furiosus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, PROLINE, ...
Authors:Ellis-Guardiola, K, Lewis, J, Sukumar, N.
Deposit date:2016-09-06
Release date:2017-09-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Crystal Structure and Conformational Dynamics of Pyrococcus furiosus Prolyl Oligopeptidase.
Biochemistry, 58, 2019
1JMS
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BU of 1jms by Molmil
Crystal Structure of the Catalytic Core of Murine Terminal Deoxynucleotidyl Transferase
Descriptor: MAGNESIUM ION, SODIUM ION, TERMINAL DEOXYNUCLEOTIDYLTRANSFERASE
Authors:Delarue, M, Boule, J.B, Lescar, J, Expert-Bezancon, N, Sukumar, N, Jourdan, N, Rougeon, F, Papanicolaou, C.
Deposit date:2001-07-19
Release date:2002-01-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Crystal structures of a template-independent DNA polymerase: murine terminal deoxynucleotidyltransferase.
Embo J., 21, 2002

 

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