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3G8S
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CRYSTAL STRUCTURE OF THE PRE-CLEAVED BACILLUS ANTHRACIS GLMS RIBOZYME
Descriptor:U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3'), GLMS RIBOZYME, ...
Authors:Strobel, S.A., Cochrane, J.C., Lipchock, S.V., Smith, K.D.
Deposit date:2009-02-12
Release date:2009-11-03
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme
Biochemistry, 48, 2009
3G8T
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CRYSTAL STRUCTURE OF THE G33A MUTANT BACILLUS ANTHRACIS GLMS RIBOZYME BOUND TO GLCN6P
Descriptor:U1 small nuclear ribonucleoprotein A, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3'), glmS glucosamine-6-phosphate activated ribozyme, ...
Authors:Strobel, S.A., Cochrane, J.C., Lipchock, S.V., Smith, K.D.
Deposit date:2009-02-12
Release date:2009-11-03
Last modified:2018-04-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme
Biochemistry, 48, 2009
3G96
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CRYSTAL STRUCTURE OF THE BACILLUS ANTHRACIS GLMS RIBOZYME BOUND TO MAN6P
Descriptor:U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3'), GLMS RIBOZYME, ...
Authors:Strobel, S.A., Cochrane, J.C., Lipchock, S.V., Smith, K.D.
Deposit date:2009-02-12
Release date:2009-11-03
Last modified:2018-04-11
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme
Biochemistry, 48, 2009
3G9C
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CRYSTAL STRUCTURE OF THE PRODUCT BACILLUS ANTHRACIS GLMS RIBOZYME
Descriptor:U1 small nuclear ribonucleoprotein A, RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3'), GLMS RIBOZYME, ...
Authors:Strobel, S.A., Cochrane, J.C., Lipchock, S.V., Smith, K.D.
Deposit date:2009-02-13
Release date:2009-11-03
Last modified:2018-04-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme
Biochemistry, 48, 2009
3L3C
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CRYSTAL STRUCTURE OF THE BACILLUS ANTHRACIS GLMS RIBOZYME BOUND TO GLC6P
Descriptor:U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A, RNA (5'-R(*AP*(A2M)*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3'), GLMS RIBOZYME, ...
Authors:Strobel, S.A., Cochrane, J.C., Lipchock, S.V., Smith, K.D.
Deposit date:2009-12-16
Release date:2009-12-29
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme
Biochemistry, 48, 2009
3MUM
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CRYSTAL STRUCTURE OF THE G20A MUTANT C-DI-GMP RIBOSWITH BOUND TO C-DI-GMP
Descriptor:U1 small nuclear ribonucleoprotein A, G20A mutant c-di-GMP Riboswitch, 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ...
Authors:Strobel, S.A., Smith, K.D.
Deposit date:2010-05-03
Release date:2010-08-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and biochemical determinants of ligand binding by the c-di-GMP riboswitch .
Biochemistry, 49, 2010
3MUR
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CRYSTAL STRUCTURE OF THE C92U MUTANT C-DI-GMP RIBOSWITH BOUND TO C-DI-GMP
Descriptor:U1 small nuclear ribonucleoprotein A, C92U mutant c-di-GMP riboswitch, 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ...
Authors:Strobel, S.A., Smith, K.D.
Deposit date:2010-05-03
Release date:2010-08-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and biochemical determinants of ligand binding by the c-di-GMP riboswitch .
Biochemistry, 49, 2010
3MUT
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CRYSTAL STRUCTURE OF THE G20A/C92U MUTANT C-DI-GMP RIBOSWITH BOUND TO C-DI-GMP
Descriptor:U1 small nuclear ribonucleoprotein A, G20A/C92U mutant c-di-GMP riboswitch, 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ...
Authors:Strobel, S.A., Smith, K.D.
Deposit date:2010-05-03
Release date:2010-08-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and biochemical determinants of ligand binding by the c-di-GMP riboswitch .
Biochemistry, 49, 2010
3MUV
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CRYSTAL STRUCTURE OF THE G20A/C92U MUTANT C-DI-GMP RIBOSWITH BOUND TO C-DI-AMP
Descriptor:U1 small nuclear ribonucleoprotein A, G20A/C92U mutant c-di-GMP riboswitch, (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, ...
Authors:Strobel, S.A., Smith, K.D.
Deposit date:2010-05-03
Release date:2010-08-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural and biochemical determinants of ligand binding by the c-di-GMP riboswitch .
Biochemistry, 49, 2010
3MXH
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NATIVE STRUCTURE OF A C-DI-GMP RIBOSWITCH FROM V. CHOLERAE
Descriptor:U1 small nuclear ribonucleoprotein A, c-di-GMP riboswitch, MAGNESIUM ION, ...
Authors:Strobel, S.A., Smith, K.D.
Deposit date:2010-05-07
Release date:2010-08-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and biochemical determinants of ligand binding by the c-di-GMP riboswitch .
Biochemistry, 49, 2010
1U6B
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CRYSTAL STRUCTURE OF A SELF-SPLICING GROUP I INTRON WITH BOTH EXONS
Descriptor:197-MER, 5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*AP*GP*AP*CP*GP *GP*CP*C)-3', 5'-R(*CP*AP*(5MU))-3', ...
Authors:Adams, P.L., Stahley, M.R., Kosek, A.B., Wang, J., Strobel, S.A.
Deposit date:2004-07-29
Release date:2004-08-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of a Self-Splicing Group I Intron with Both Exons.
Nature, 430, 2004
1ZZN
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CRYSTAL STRUCTURE OF A GROUP I INTRON/TWO EXON COMPLEX THAT INCLUDES ALL CATALYTIC METAL ION LIGANDS.
Descriptor:197-MER, 5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*AP*GP*AP*CP*GP*GP*CP*C)-3', 5'-R(*CP*AP*(5MU))-3', ...
Authors:Stahley, M.R., Strobel, S.A.
Deposit date:2005-06-14
Release date:2005-08-30
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (3.37 Å)
Cite:Structural evidence for a two-metal-ion mechanism of group I intron splicing.
Science, 309, 2005
5T83
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STRUCTURE OF A GUANIDINE-I RIBOSWITCH FROM S. ACIDOPHILUS
Descriptor:RNA (95-MER), STRONTIUM ION, SPERMINE (FULLY PROTONATED FORM), ...
Authors:Reiss, C.W., Xiong, Y., Strobel, S.A.
Deposit date:2016-09-06
Release date:2017-01-11
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structural Basis for Ligand Binding to the Guanidine-I Riboswitch.
Structure, 25, 2017
1KQS
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THE HALOARCULA MARISMORTUI 50S COMPLEXED WITH A PRETRANSLOCATIONAL INTERMEDIATE IN PROTEIN SYNTHESIS
Descriptor:23S RRNA, 5S RRNA, CCA, ...
Authors:Schmeing, T.M., Seila, A.C., Hansen, J.L., Freeborn, B., Soukup, J.K., Scaringe, S.A., Strobel, S.A., Moore, P.B., Steitz, T.A.
Deposit date:2002-01-07
Release date:2002-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A pre-translocational intermediate in protein synthesis observed in crystals of enzymatically active 50S subunits.
Nat.Struct.Biol., 9, 2002
2AKG
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THALLIUM FORM OF THE G-QUADRUPLEX FROM OXYTRICHA NOVA, D(G4T4G4)2
Descriptor:5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3'
Authors:Gill, M.L., Strobel, S.A., Loria, J.P.
Deposit date:2005-08-03
Release date:2005-11-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:(205)Tl NMR methods for the characterization of monovalent cation binding to nucleic acids
J.Am.Chem.Soc., 127, 2005
2HBN
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CRYSTALLIZATION OF THE TL+-FORM OF THE OXYTRICHA NOVA G-QUADRUPLEX
Descriptor:5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', THALLIUM (I) ION
Authors:Gill, M.L., Strobel, S.A., Loria, J.P.
Deposit date:2006-06-14
Release date:2006-09-19
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystallization and characterization of the thallium form of the Oxytricha nova G-quadruplex.
Nucleic Acids Res., 34, 2006
3BO2
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A RELAXED ACTIVE SITE FOLLOWING EXON LIGATION BY A GROUP I INTRON
Descriptor:Group I intron P9, RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*AP*G)-3'), RNA (5'-R(*AP*CP*GP*GP*CP*C)-3'), ...
Authors:Lipchock, S.V., Strobel, S.A.
Deposit date:2007-12-17
Release date:2008-04-01
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:A relaxed active site after exon ligation by the group I intron
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BO3
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A RELAXED ACTIVE SITE FOLLOWING EXON LIGATION BY A GROUP I INTRON
Descriptor:Group I intron P9, RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*AP*G)-3'), RNA (5'-R(*CP*AP*UP*AP*CP*GP*GP*CP*C)-3'), ...
Authors:Lipchock, S.V., Strobel, S.A.
Deposit date:2007-12-17
Release date:2008-04-01
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:A relaxed active site after exon ligation by the group I intron
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BO4
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A RELAXED ACTIVE SITE FOLLOWING EXON LIGATION BY A GROUP I INTRON
Descriptor:Group I intron P9, DNA/RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*A)-D(P*DG)-3'), DNA/RNA (5'-R(*CP*A)-D(P*DU)-R(P*AP*CP*GP*GP*CP*C)-3'), ...
Authors:Lipchock, S.V., Strobel, S.A.
Deposit date:2007-12-17
Release date:2008-04-01
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (3.33 Å)
Cite:A relaxed active site after exon ligation by the group I intron
Proc.Natl.Acad.Sci.Usa, 105, 2008
3IIN
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PLASTICITY OF THE KINK TURN STRUCTURAL MOTIF
Descriptor:U1 small nuclear ribonucleoprotein A, Group I intron, DNA/RNA (5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*GP*AP*CP*C)-D(P*AP*GP*A)-R(P*CP*GP*GP*CP*C)-3'), ...
Authors:Lipchock, S.V., Strobel, S.A., Antonioli, A.H., Cochrane, J.C.
Deposit date:2009-08-02
Release date:2010-03-09
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (4.18 Å)
Cite:Plasticity of the RNA kink turn structural motif.
Rna, 16, 2010
3Q3Z
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STRUCTURE OF A C-DI-GMP-II RIBOSWITCH FROM C. ACETOBUTYLICUM BOUND TO C-DI-GMP
Descriptor:c-di-GMP-II riboswitch, 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), MAGNESIUM ION
Authors:Smith, K.D., Shanahan, C.A., Moore, E.L., Simon, A.C., Strobel, S.A.
Deposit date:2010-12-22
Release date:2011-05-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structural basis of differential ligand recognition by two classes of bis-(3'-5')-cyclic dimeric guanosine monophosphate-binding riboswitches.
Proc.Natl.Acad.Sci.USA, 108, 2011
3UCU
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THE C-DI-GMP-I RIBOSWITCH BOUND TO PGPG
Descriptor:U1 small nuclear ribonucleoprotein A, RNA (92-MER), diguanosine monophosphate, ...
Authors:Smith, K.D., Strobel, S.A.
Deposit date:2011-10-27
Release date:2012-01-04
Last modified:2012-10-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and biochemical characterization of linear dinucleotide analogues bound to the c-di-GMP-I aptamer.
Biochemistry, 51, 2012
3UCZ
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THE C-DI-GMP-I RIBOSWITCH BOUND TO GPG
Descriptor:U1 small nuclear ribonucleoprotein A, RNA (92-MER), RNA (5'-R(*GP*G)-3'), ...
Authors:Smith, K.D., Strobel, S.A.
Deposit date:2011-10-27
Release date:2012-01-04
Last modified:2012-10-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and biochemical characterization of linear dinucleotide analogues bound to the c-di-GMP-I aptamer.
Biochemistry, 51, 2012
3UD3
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THE C92U MUTANT C-DI-GMP-I RIBOSWITCH BOUND TO PGPA
Descriptor:U1 small nuclear ribonucleoprotein A, RNA (92-MER), RNA (5'-R(P*GP*A)-3'), ...
Authors:Smith, K.D., Strobel, S.A.
Deposit date:2011-10-27
Release date:2012-01-04
Last modified:2012-10-17
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural and biochemical characterization of linear dinucleotide analogues bound to the c-di-GMP-I aptamer.
Biochemistry, 51, 2012
3UD4
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THE C92U MUTANT C-DI-GMP-I RIBOSWITCH BOUND TO GPA
Descriptor:U1 small nuclear ribonucleoprotein A, RNA (92-MER), RNA (5'-R(*GP*A)-3'), ...
Authors:Smith, K.D., Strobel, S.A.
Deposit date:2011-10-27
Release date:2012-01-04
Last modified:2012-10-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and biochemical characterization of linear dinucleotide analogues bound to the c-di-GMP-I aptamer.
Biochemistry, 51, 2012
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