Author results

1R62
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CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF THE TWO-COMPONENT SYSTEM TRANSMITTER PROTEIN NRII (NTRB)
Descriptor:Nitrogen regulation protein NR(II)
Authors:Song, Y., Peisach, D., Pioszak, A.A., Xu, Z., Ninfa, A.J.
Deposit date:2003-10-14
Release date:2004-06-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of the C-terminal Domain of the Two-Component System Transmitter Protein Nitrogen Regulator II (NRII; NtrB), Regulator of Nitrogen Assimilation in Escherichia coli.
Biochemistry, 43, 2004
5HDM
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CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA GLUTAMATE-1-SEMIALDEHYDE-2,1-AMINOMUTASE
Descriptor:Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplastic, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ...
Authors:Song, Y., Pu, H., Liu, L.
Deposit date:2016-01-05
Release date:2016-06-15
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of glutamate-1-semialdehyde-2,1-aminomutase from Arabidopsis thaliana
Acta Crystallogr.,Sect.F, 72, 2016
5X7L
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STRUCTURE OF TSRD FROM STREPTOMYCES LAURENTII
Descriptor:TsrD, ISOPROPYL ALCOHOL
Authors:Song, Y., Lin, Z., Deng, W., Liu, W.
Deposit date:2017-02-27
Release date:2018-03-07
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Structure of TsrD from Streptomyces laurentii
To Be Published
5YH1
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MEMBER OF S1P FAMILY OF RIBOSOMAL PROTEINS PF0399 DHH DOMAIN
Descriptor:Member of s1p family of ribosomal proteins, GLYCEROL, MANGANESE (II) ION
Authors:Song, Y., Liu, X.P.
Deposit date:2017-09-27
Release date:2018-08-01
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Member of s1p family of ribosomal proteins PF0399 DHH domain
To Be Published
5YHX
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STRUCTURE OF LACTOCOCCUS LACTIS ZITR, WILD TYPE
Descriptor:Zinc transport transcriptional regulator, ZINC ION
Authors:Song, Y., Liu, H., Zhu, R., Yi, C., Chen, P.
Deposit date:2017-10-01
Release date:2017-12-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of Lactococcus lactis ZitR
Proc.Natl.Acad.Sci.Usa, 2017
5YHY
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STRUCTURE OF LACTOCOCCUS LACTIS ZITR, C30S MUTANT
Descriptor:Zinc transport transcriptional regulator, ZINC ION
Authors:Song, Y., Liu, H., Zhu, R., Yi, C., Chen, P.
Deposit date:2017-10-01
Release date:2017-12-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of Lactococcus lactis ZitR
Proc.Natl.Acad.Sci.Usa, 2017
5YHZ
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STRUCTURE OF LACTOCOCCUS LACTIS ZITR, E41A MUTANT
Descriptor:Zinc transport transcriptional regulator, ZINC ION, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Song, Y., Liu, H., Zhu, R., Yi, C., Chen, P.
Deposit date:2017-10-01
Release date:2017-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Lactococcus lactis ZitR
Proc.Natl.Acad.Sci.Usa, 2017
5YI0
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STRUCTURE OF LACTOCOCCUS LACTIS ZITR, C30AH42A MUTANT
Descriptor:Zinc transport transcriptional regulator, ZINC ION
Authors:Song, Y., Liu, H., Zhu, R., Yi, C., Chen, P.
Deposit date:2017-10-01
Release date:2017-12-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of Lactococcus lactis ZitR
Proc.Natl.Acad.Sci.Usa, 2017
5YI1
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STRUCTURE OF LACTOCOCCUS LACTIS ZITR, C30AH42A MUTANT IN APO FORM
Descriptor:Zinc transport transcriptional regulator
Authors:Song, Y., Liu, H., Zhu, R., Yi, C., Chen, P.
Deposit date:2017-10-01
Release date:2017-12-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of Lactococcus lactis ZitR
Proc.Natl.Acad.Sci.Usa, 2017
5YI2
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STRUCTURE OF LACTOCOCCUS LACTIS ZITR, WILD TYPE IN COMPLEX WITH DNA
Descriptor:Zinc transport transcriptional regulator, DNA (5'-D(*TP*GP*TP*TP*AP*AP*CP*TP*AP*GP*TP*TP*AP*AP*CP*A)-3'), ZINC ION
Authors:Song, Y., Liu, H., Zhu, R., Yi, C., Chen, P.
Deposit date:2017-10-01
Release date:2017-12-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Lactococcus lactis ZitR
Proc.Natl.Acad.Sci.Usa, 2017
5YI3
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STRUCTURE OF LACTOCOCCUS LACTIS ZITR, C30S MUTANT IN COMPLEX WITH DNA
Descriptor:Zinc transport transcriptional regulator, DNA (5'-D(*TP*GP*TP*TP*AP*AP*CP*TP*AP*GP*TP*TP*AP*AP*CP*A)-3'), ZINC ION
Authors:Song, Y., Liu, H., Zhu, R., Yi, C., Chen, P.
Deposit date:2017-10-01
Release date:2017-12-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of Lactococcus lactis ZitR
Proc.Natl.Acad.Sci.Usa, 2017
5V58
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CRYSTAL STRUCTURE OF HUMAN PROLYL-TRNA SYNTHETASE IN COMPLEX WITH AZE-SA
Descriptor:Bifunctional glutamate/proline--tRNA ligase, 5'-O-{[(2S)-azetidine-2-carbonyl]sulfamoyl}adenosine, ZINC ION
Authors:Zhou, H., Song, Y., Schimmel, P.
Deposit date:2017-03-13
Release date:2018-01-10
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Double mimicry evades tRNA synthetase editing by toxic vegetable-sourced non-proteinogenic amino acid.
Nat Commun, 8, 2017
5V59
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CRYSTAL STRUCTURE OF CATALYTIC FRAGMENT OF HUMAN ALARS IN COMPLEX WITH AZE-SA
Descriptor:Alanine--tRNA ligase, cytoplasmic, 5'-O-{[(2S)-azetidine-2-carbonyl]sulfamoyl}adenosine
Authors:Zhou, H., Song, Y., Schimmel, P.
Deposit date:2017-03-13
Release date:2018-01-10
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Double mimicry evades tRNA synthetase editing by toxic vegetable-sourced non-proteinogenic amino acid.
Nat Commun, 8, 2017
5XOR
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CRYSTAL STRUCTURE OF N-TERMINAL REPLICASE PROTEIN OF PORCINE CIRCOVIRUS TYPE 2
Descriptor:Rep protein
Authors:Song, Y., Peng, G.
Deposit date:2017-05-30
Release date:2018-07-04
Last modified:2018-09-19
Method:X-RAY DIFFRACTION (2.699 Å)
Cite:Crystal Structure of the Dimerized N Terminus of Porcine Circovirus Type 2 Replicase Protein Reveals a Novel Antiviral Interface
J. Virol., 92, 2018
5CVC
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STRUCTURE OF MAIZE SERINE RACEMASE
Descriptor:Serine racemase, MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Song, Y., Zou, L., Fan, J.
Deposit date:2015-07-26
Release date:2016-03-16
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure of maize serine racemase with pyridoxal 5'-phosphate.
Acta Crystallogr.,Sect.F, 72, 2016
5VBL
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STRUCTURE OF APELIN RECEPTOR IN COMPLEX WITH AGONIST PEPTIDE
Descriptor:agonist peptide, Apelin receptor,Rubredoxin,Apelin receptor Chimera, ZINC ION, ...
Authors:Ma, Y., Yue, Y., Ma, Y., Zhang, Q., Zhou, Q., Song, Y., Shen, Y., Li, X., Ma, X., Li, C., Hanson, M.A., Han, G.W., Sickmier, E.A., Swaminath, G., Zhao, S., Stevems, R.C., Hu, L.A., Zhong, W., Zhang, M., Xu, F.
Deposit date:2017-03-29
Release date:2017-05-31
Last modified:2017-07-19
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Apelin Control of the Human Apelin Receptor
Structure, 25, 2017
5WYD
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STRUCTURAL OF PSEUDOMONAS AERUGINOSA DSPI
Descriptor:Probable enoyl-CoA hydratase/isomerase, PENTANEDIAL, ISOPROPYL ALCOHOL, ...
Authors:Liu, L., Peng, C., Li, T., Li, C., He, L., Song, Y., Zhu, Y., Shen, Y., Bao, R.
Deposit date:2017-01-12
Release date:2018-01-31
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Functional and structural characterization of Pseudomonas aeruginosa DspI verified its role in pathogenicity via the modulation of diffusible signal factor (DSF) biosynthesis
To Be Published
3SR4
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CRYSTAL STRUCTURE OF HUMAN DOT1L IN COMPLEX WITH A SELECTIVE INHIBITOR
Descriptor:Histone-lysine N-methyltransferase, H3 lysine-79 specific, (2S)-2-azanyl-4-[[(2S,3S,4R,5R)-5-[6-(methylamino)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acid, ...
Authors:Diao, J., Chen, P., Yao, Y., Prasad, B.V.V., Song, Y.
Deposit date:2011-07-06
Release date:2011-10-05
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Selective Inhibitors of Histone Methyltransferase DOT1L: Design, Synthesis, and Crystallographic Studies.
J.Am.Chem.Soc., 133, 2011
4I3K
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CRYSTAL STRUCTURE OF A METABOLIC REDUCTASE WITH 1-HYDROXY-6-(4-HYDROXYBENZYL)-4-METHYLPYRIDIN-2(1H)-ONE
Descriptor:Isocitrate dehydrogenase [NADP] cytoplasmic, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION, ...
Authors:Zheng, B., Yao, Y., Liu, Z., Deng, L., Anglin, J.L., Jiang, H., Prasad, B.V.V., Song, Y.
Deposit date:2012-11-26
Release date:2013-05-22
Last modified:2013-07-10
Method:X-RAY DIFFRACTION (3.3056 Å)
Cite:Crystallographic Investigation and Selective Inhibition of Mutant Isocitrate Dehydrogenase.
ACS Med Chem Lett, 4, 2013
4I3L
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CRYSTAL STRUCTURE OF A METABOLIC REDUCTASE WITH 6-BENZYL-1-HYDROXY-4-METHYLPYRIDIN-2(1H)-ONE
Descriptor:Isocitrate dehydrogenase [NADP] cytoplasmic, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION, ...
Authors:Zheng, B., Yao, Y., Liu, Z., Deng, L., Anglin, J.L., Jiang, H., Prasad, B.V.V., Song, Y.
Deposit date:2012-11-26
Release date:2013-05-22
Last modified:2013-07-10
Method:X-RAY DIFFRACTION (3.292 Å)
Cite:Crystallographic Investigation and Selective Inhibition of Mutant Isocitrate Dehydrogenase.
ACS Med Chem Lett, 4, 2013
4XRX
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CRYSTAL STRUCTURE OF A METABOLIC REDUCTASE WITH (E)-5-((1-METHYL-5-OXO-2-THIOXOIMIDAZOLIDIN-4-YLIDENE)METHYL)PYRIDIN-2(1H)-ONE
Descriptor:Isocitrate dehydrogenase [NADP] cytoplasmic, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, 5-[(E)-(1-methyl-5-oxo-2-thioxoimidazolidin-4-ylidene)methyl]pyridin-2(1H)-one
Authors:Zheng, B., Wu, F., Jiang, H., Kogiso, M., Yao, Y., Zhou, C., Li, X., Song, Y.
Deposit date:2015-01-21
Release date:2015-12-09
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Inhibition of Cancer-Associated Mutant Isocitrate Dehydrogenases by 2-Thiohydantoin Compounds.
J.Med.Chem., 58, 2015
4XS3
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CRYSTAL STRUCTURE OF A METABOLIC REDUCTASE WITH (E)-1-BENZYL-5-((1-METHYL-5-OXO-2-THIOXOIMIDAZOLIDIN-4-YLIDENE)METHYL)PYRIDIN-2(1H)-ONE
Descriptor:Isocitrate dehydrogenase [NADP] cytoplasmic, (E)-1-benzyl-5-((1-methyl-5-oxo-2-thioxoimidazolidin-4-ylidene)methyl)pyridin-2(1H)-one, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Zheng, B., Wu, F., Jiang, H., Kogiso, M., Yao, Y., Zhou, C., Li, X., Song, Y.
Deposit date:2015-01-21
Release date:2016-07-27
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (3.291 Å)
Cite:Inhibition of Cancer-Associated Mutant Isocitrate Dehydrogenases by 2-Thiohydantoin Compounds.
J.Med.Chem., 58, 2015
3RAS
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CRYSTAL STRUCTURE OF 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXR) COMPLEXED WITH A LIPOPHILIC PHOSPHONATE INHIBITOR
Descriptor:1-deoxy-D-xylulose 5-phosphate reductoisomerase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, 3-(N-HYDROXYACETAMIDO)-1-(3,4-DICHLOROPHENYL)PROPYLPHOSPHONIC ACID, ...
Authors:Diao, J., Deng, L., Prasad, B.V.V., Song, Y.
Deposit date:2011-03-28
Release date:2011-05-25
Last modified:2012-07-25
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Inhibition of 1-deoxy-D-xylulose-5-phosphate reductoisomerase by lipophilic phosphonates: SAR, QSAR, and crystallographic studies.
J.Med.Chem., 54, 2011
4GAE
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CRYSTAL STRUCTURE OF PLASMODIUM DXR IN COMPLEX WITH A PYRIDINE-CONTAINING INHIBITOR
Descriptor:1-deoxy-D-xylulose 5-phosphate reductoisomerase, apicoplast, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Diao, J., Xue, J., Cai, G., Deng, L., Song, Y.
Deposit date:2012-07-25
Release date:2013-02-06
Last modified:2013-07-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Antimalarial and Structural Studies of Pyridine-containing Inhibitors of 1-Deoxyxylulose-5-phosphate Reductoisomerase.
ACS Med Chem Lett, 4, 2013
2LP1
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THE SOLUTION NMR STRUCTURE OF THE TRANSMEMBRANE C-TERMINAL DOMAIN OF THE AMYLOID PRECURSOR PROTEIN (C99)
Descriptor:C99
Authors:Barrett, P.J., Song, Y., Van Horn, W.D., Hustedt, E.J., Schafer, J.M., Hadziselimovic, A., Beel, A.J., Sanders, C.R.
Deposit date:2012-01-30
Release date:2012-06-06
Last modified:2012-06-20
Method:SOLUTION NMR
Cite:The amyloid precursor protein has a flexible transmembrane domain and binds cholesterol.
Science, 336, 2012
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