Author results

1IC4
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CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT(HD32A)-HEN LYSOZYME COMPLEX
Descriptor:LYSOZYME BINDING IG KAPPA CHAIN, IGG1 FAB CHAIN H, LYSOZYME C
Authors:Shiroishi, M., Yokota, A., Tsumoto, K., Kondo, H., Nishimiya, Y., Horii, K., Matsushima, M., Ogasahara, K., Yutani, K., Kumagai, I.
Deposit date:2001-03-30
Release date:2001-07-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural evidence for entropic contribution of salt bridge formation to a protein antigen-antibody interaction: the case of hen lysozyme-HyHEL-10 Fv complex.
J.Biol.Chem., 276, 2001
1IC5
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CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT(HD99A)-HEN LYSOZYME COMPLEX
Descriptor:LYSOZYME BINDING IG KAPPA CHAIN, IGG1 FAB CHAIN H, LYSOZYME C
Authors:Shiroishi, M., Yokota, A., Tsumoto, K., Kondo, H., Nishimiya, Y., Horii, K., Matsushima, M., Ogasahara, K., Yutani, K., Kumagai, I.
Deposit date:2001-03-30
Release date:2001-07-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural evidence for entropic contribution of salt bridge formation to a protein antigen-antibody interaction: the case of hen lysozyme-HyHEL-10 Fv complex.
J.Biol.Chem., 276, 2001
1IC7
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CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT(HD32A99A)-HEN LYSOZYME COMPLEX
Descriptor:LYSOZYME BINDING IG KAPPA CHAIN, IGG1 FAB CHAIN H, LYSOZYME C
Authors:Shiroishi, M., Yokota, A., Tsumoto, K., Kondo, H., Nishimiya, Y., Horii, K., Matsushima, M., Ogasahara, K., Yutani, K., Kumagai, I.
Deposit date:2001-03-30
Release date:2001-07-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural evidence for entropic contribution of salt bridge formation to a protein antigen-antibody interaction: the case of hen lysozyme-HyHEL-10 Fv complex.
J.Biol.Chem., 276, 2001
2D3V
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CRYSTAL STRUCTURE OF LEUKOCYTE IG-LIKE RECEPTOR A5 (LILRA5/LIR9/ILT11)
Descriptor:leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1
Authors:Shiroishi, M., Kajikawa, M., Kuroki, K., Ose, T., Kohda, D., Maenaka, K.
Deposit date:2005-10-03
Release date:2006-06-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the human monocyte-activating receptor,
J.Biol.Chem., 281, 2006
5XMH
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CRYSTAL STRUCTURE OF AN IGM RHEUMATOID FACTOR YES8C IN COMPLEX WITH IGG1 FC
Descriptor:Immunoglobulin gamma-1 heavy chain, YES8c light chain, YES8c heavy chain, ...
Authors:Shiroishi, M., Shimokawa, K., Lee, J.M., Kusakabe, M., Ueda, T.
Deposit date:2017-05-15
Release date:2018-03-21
Last modified:2018-05-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-function analyses of a stereotypic rheumatoid factor unravel the structural basis for germline-encoded antibody autoreactivity.
J. Biol. Chem., 293, 2018
1UFU
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CRYSTAL STRUCTURE OF LIGAND BINDING DOMAIN OF IMMUNOGLOBULIN-LIKE TRANSCRIPT 2 (ILT2; LIR-1)
Descriptor:Immunoglobulin-like transcript 2
Authors:Shiroishi, M., Amano, K., Rasubala, L., Tsumoto, K., Kumagai, I., Kohda, D., Maenaka, K.
Deposit date:2003-06-10
Release date:2004-08-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Kinetic and thermodynamic properties of the interaction between Immunoglobulin like transcript (ILT) and MHC class I
To be Published
1VDG
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CRYSTAL STRUCTURE OF LIR1.01, ONE OF THE ALLELES OF LIR1
Descriptor:Leukocyte immunoglobulin-like receptor subfamily B member 1
Authors:Shiroishi, M., Rasubala, L., Kuroki, K., Amano, K., Tsuchiya, N., Tokunaga, K., Kohda, D., Maenaka, K.
Deposit date:2004-03-22
Release date:2005-08-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of LIR1.03, one of the alleles of LIR1
To be Published
2D31
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CRYSTAL STRUCTURE OF DISULFIDE-LINKED HLA-G DIMER
Descriptor:HLA class I histocompatibility antigen, alpha chain G, Beta-2-microglobulin, ...
Authors:Shiroishi, M., Kuroki, K., Ose, T., Rasubala, L., Shiratori, I., Arase, H., Tsumoto, K., Kumagai, I., Kohda, D., Maenaka, K.
Deposit date:2005-09-23
Release date:2006-03-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Efficient Leukocyte Ig-like Receptor Signaling and Crystal Structure of Disulfide-linked HLA-G Dimer
J.Biol.Chem., 281, 2006
2DQC
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CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT(HY33F) COMPLEXED WITH HEN EGG LYSOZYME
Descriptor:lysozyme binding Ig kappa chain V23-J2 region, Ig VH,anti-lysozyme, Lysozyme C
Authors:Shiroishi, M., Kondo, H., Tsumoto, K., Kumagai, I.
Deposit date:2006-05-25
Release date:2007-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural consequences of mutations in interfacial Tyr residues of a protein antigen-antibody complex. The case of HyHEL-10-HEL
J.Biol.Chem., 282, 2007
2DQD
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CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT (HY50F) COMPLEXED WITH HEN EGG LYSOZYME
Descriptor:lysozyme binding Ig kappa chain V23-J2 region, Ig VH,anti-lysozyme, Lysozyme C
Authors:Shiroishi, M., Kondo, H., Tsumoto, K., Kumagai, I.
Deposit date:2006-05-25
Release date:2007-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural consequences of mutations in interfacial Tyr residues of a protein antigen-antibody complex. The case of HyHEL-10-HEL
J.Biol.Chem., 282, 2007
2DQE
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CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT (HY53A) COMPLEXED WITH HEN EGG LYSOZYME
Descriptor:lysozyme binding Ig kappa chain V23-J2 region, Ig VH,anti-lysozyme, Lysozyme C
Authors:Shiroishi, M., Kondo, H., Tsumoto, K., Kumagai, I.
Deposit date:2006-05-25
Release date:2007-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural consequences of mutations in interfacial Tyr residues of a protein antigen-antibody complex. The case of HyHEL-10-HEL
J.Biol.Chem., 282, 2007
2DQF
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CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT (Y33AY53A) COMPLEXED WITH HEN EGG LYSOZYME
Descriptor:lysozyme binding Ig kappa chain V23-J2 region, Ig VH,anti-lysozyme, Lysozyme C
Authors:Shiroishi, M., Kondo, H., Tsumoto, K., Kumagai, I.
Deposit date:2006-05-25
Release date:2007-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural consequences of mutations in interfacial Tyr residues of a protein antigen-antibody complex. The case of HyHEL-10-HEL
J.Biol.Chem., 282, 2007
2DQG
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CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT (HY53F) COMPLEXED WITH HEN EGG LYSOZYME
Descriptor:lysozyme binding Ig kappa chain V23-J2 region, Ig VH,anti-lysozyme, Lysozyme C
Authors:Shiroishi, M., Kondo, H., Tsumoto, K., Kumagai, I.
Deposit date:2006-05-25
Release date:2007-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural consequences of mutations in interfacial Tyr residues of a protein antigen-antibody complex. The case of HyHEL-10-HEL
J.Biol.Chem., 282, 2007
2DQH
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CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT (HY58A) COMPLEXED WITH HEN EGG LYSOZYME
Descriptor:lysozyme binding Ig kappa chain V23-J2 region, Ig VH,anti-lysozyme, Lysozyme C
Authors:Shiroishi, M., Kondo, H., Tsumoto, K., Kumagai, I.
Deposit date:2006-05-26
Release date:2007-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural consequences of mutations in interfacial Tyr residues of a protein antigen-antibody complex. The case of HyHEL-10-HEL
J.Biol.Chem., 282, 2007
2DQI
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CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT (LY50A) COMPLEXED WITH HEN EGG LYSOZYME
Descriptor:lysozyme binding Ig kappa chain V23-J2 region, Ig VH,anti-lysozyme, Lysozyme C
Authors:Shiroishi, M., Kondo, H., Tsumoto, K., Kumagai, I.
Deposit date:2006-05-26
Release date:2007-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural consequences of mutations in interfacial Tyr residues of a protein antigen-antibody complex. The case of HyHEL-10-HEL
J.Biol.Chem., 282, 2007
2DQJ
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CRYSTAL STRUCTURE OF HYHEL-10 FV (WILD-TYPE) COMPLEXED WITH HEN EGG LYSOZYME AT 1.8A RESOLUTION
Descriptor:lysozyme binding Ig kappa chain V23-J2 region, Ig VH,anti-lysozyme, Lysozyme C
Authors:Shiroishi, M., Kondo, H., Tsumoto, K., Kumagai, I.
Deposit date:2006-05-26
Release date:2007-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural consequences of mutations in interfacial Tyr residues of a protein antigen-antibody complex. The case of HyHEL-10-HEL
J.Biol.Chem., 282, 2007
2DYP
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CRYSTAL STRUCTURE OF LILRB2(LIR2/ILT4/CD85D) COMPLEXED WITH HLA-G
Descriptor:HLA class I histocompatibility antigen, alpha chain G, Beta-2-microglobulin, ...
Authors:Shiroishi, M., Kuroki, K., Rasubala, L., Kohda, D., Maenaka, K.
Deposit date:2006-09-15
Release date:2006-11-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for recognition of the nonclassical MHC molecule HLA-G by the leukocyte Ig-like receptor B2 (LILRB2/LIR2/ILT4/CD85d)
Proc.Natl.Acad.Sci.Usa, 103, 2006
1C08
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CRYSTAL STRUCTURE OF HYHEL-10 FV-HEN LYSOZYME COMPLEX
Descriptor:ANTI-HEN EGG WHITE LYSOZYME ANTIBODY (HYHEL-10), LYSOZYME
Authors:Shiroishi, M., Kondo, H., Matsushima, M., Tsumoto, K., Kumagai, I.
Deposit date:1999-07-15
Release date:2000-07-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of anti-Hen egg white lysozyme antibody (HyHEL-10) Fv-antigen complex. Local structural changes in the protein antigen and water-mediated interactions of Fv-antigen and light chain-heavy chain interfaces.
J.Biol.Chem., 274, 1999
1UGN
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CRYSTAL STRUCTURE OF LIR1.02, ONE OF THE ALLELES OF LIR1
Descriptor:Leukocyte immunoglobulin-like receptor 1
Authors:Shiroishi, M., Rasubala, L., Kuroki, K., Amano, K., Tsuchiya, N., Tokunaga, K., Kohda, D., Maenaka, K.
Deposit date:2003-06-17
Release date:2004-08-10
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Extensive polymorphisms of LILRB1 (ILT2, LIR1) and their association with HLA-DRB1 shared epitope negative rheumatoid arthritis.
Hum.Mol.Genet., 14, 2005
5Y25
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EGFR KINASE DOMAIN MUTANT (T790M/L858R) WITH COVALENT LIGAND NS-062
Descriptor:Epidermal growth factor receptor, (2R)-N-[4-[(3-chloranyl-4-fluoranyl-phenyl)amino]-7-(3-morpholin-4-ylpropoxy)quinazolin-6-yl]-1-(2-fluoranylethanoyl)pyrrolidine-2-carboxamide
Authors:Shiroishi, M., Abe, Y., Caaveiro, J.M.M., Sakamoto, S., Morimoto, S., Fuchida, H., Shindo, N., Ojida, A.
Deposit date:2017-07-24
Release date:2018-07-25
Last modified:2019-08-07
Method:X-RAY DIFFRACTION (3.102 Å)
Cite:Selective and reversible modification of kinase cysteines with chlorofluoroacetamides.
Nat.Chem.Biol., 15, 2019
1J05
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THE CRYSTAL STRUCTURE OF ANTI-CARCINOEMBRYONIC ANTIGEN MONOCLONAL ANTIBODY T84.66 FV FRAGMENT
Descriptor:anti-CEA mAb T84.66, light chain, heavy chain, ...
Authors:Kondo, H., Nishimura, Y., Shiroishi, M., Asano, R., Noro, N., Tsumoto, K., Kumagai, I.
Deposit date:2002-11-01
Release date:2003-12-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of anti-carcinoembryonic antigen monoclonal antibody T84.66 Fv fragment
To be Published
1J1O
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CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT LY50F COMPLEXED WITH HEN EGG WHITE LYSOZYME
Descriptor:lysozyme binding Ig kappa chain V23-J2 region, Ig VH,anti-lysozyme, Lysozyme C
Authors:Yokota, A., Tsumoto, K., Shiroishi, M., Kondo, H., Kumagai, I.
Deposit date:2002-12-13
Release date:2003-01-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Role of Hydrogen Bonding via Interfacial Water Molecules in Antigen-Antibody Complexation. THE HyHEL-10-HEL INTERACTION
J.BIOL.CHEM., 278, 2003
1J1P
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CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT LS91A COMPLEXED WITH HEN EGG WHITE LYSOZYME
Descriptor:lysozyme binding Ig kappa chain V23-J2 region, Ig VH,anti-lysozyme, Lysozyme C
Authors:Yokota, A., Tsumoto, K., Shiroishi, M., Kondo, H., Kumagai, I.
Deposit date:2002-12-13
Release date:2003-01-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Role of Hydrogen Bonding via Interfacial Water Molecules in Antigen-Antibody Complexation. THE HyHEL-10-HEL INTERACTION
J.BIOL.CHEM., 278, 2003
1J1X
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CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT LS93A COMPLEXED WITH HEN EGG WHITE LYSOZYME
Descriptor:lysozyme binding Ig kappa chain V23-J2 region, Ig VH,anti-lysozyme, Lysozyme C
Authors:Yokota, A., Tsumoto, K., Shiroishi, M., Kondo, H., Kumagai, I.
Deposit date:2002-12-20
Release date:2003-01-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Role of Hydrogen Bonding via Interfacial Water Molecules in Antigen-Antibody Complexation. THE HyHEL-10-HEL INTERACTION
J.BIOL.CHEM., 278, 2003
3A67
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CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT LN31D COMPLEXED WITH HEN EGG WHITE LYSOZYME
Descriptor:Lysozyme binding ig kappa chain V23-J2 region, IG VH, anti-lysozyme, ...
Authors:Yokota, A., Tsumoto, K., Shiroishi, M., Nakanishi, T., Kondo, H., Kumagai, I.
Deposit date:2009-08-24
Release date:2009-12-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Contribution of asparagine residues to the stabilization of a proteinaceous antigen-antibody complex, HyHEL-10-hen egg white lysozyme
J.Biol.Chem., 285, 2010
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