Author results

1IH9
  • Download 1ih9
  • View 1ih9
Molmil generated image of 1ih9
NMR STRUCTURE OF ZERVAMICIN IIB (PEPTAIBOL ANTIBIOTIC) BOUND TO DPC MICELLES
Descriptor:ZERVAMICIN IIB
Authors:Shenkarev, Z.O., Balasheva, T.A., Efremov, R.G., Yakimenko, Z.A., Ovchinnikova, T.V., Raap, J., Arseniev, A.S.
Deposit date:2001-04-19
Release date:2002-02-13
Last modified:2012-12-12
Method:SOLUTION NMR
Cite:Spatial Structure of Zervamicin Iib Bound to Dpc Micelles: Implications for Voltage-Gating.
Biophys.J., 82, 2002
1ZNU
  • Download 1znu
  • View 1znu
Molmil generated image of 1znu
STRUCTURE OF CYCLOTIDE KALATA B1 IN DPC MICELLES SOLUTION
Descriptor:Kalata B1
Authors:Shenkarev, Z.O., Nadezhdin, K.D., Sobol, V.A., Sobol, A.G., Skjeldal, L., Arseniev, A.S.
Deposit date:2005-05-12
Release date:2006-04-25
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Conformation and mode of membrane interaction in cyclotides. Spatial structure of kalata B1 bound to a dodecylphosphocholine micelle.
Febs J., 273, 2006
2L8X
  • Download 2l8x
  • View 2l8x
Molmil generated image of 2l8x
SPATIAL STRUCTURE OF ANTIMICROBIAL PEPTIDE ARENICIN-2 DIMER IN DPC MICELLES
Descriptor:Arenicin-2
Authors:Shenkarev, Z.O., Trunov, K.I., Paramonov, A.S., Arseniev, A.S.
Deposit date:2011-01-27
Release date:2011-12-14
Method:SOLUTION NMR
Cite:Molecular mechanism of action of beta-hairpin antimicrobial peptide arenicin: oligomeric structure in dodecylphosphocholine micelles and pore formation in planar lipid bilayers
Biochemistry, 50, 2011
2M1F
  • Download 2m1f
  • View 2m1f
Molmil generated image of 2m1f
NMR STRUCTURE OF ANTIAMOEBIN I (PEPTAIBOL ANTIBIOTIC) BOUND TO DMPC/DHPC BICELLES
Descriptor:Antiamoebin I
Authors:Shenkarev, Z.O., Paramonov, A.S., Gizatullina, A.K.
Deposit date:2012-11-27
Release date:2012-12-12
Last modified:2013-10-02
Method:SOLUTION NMR
Cite:Peptaibol antiamoebin I: spatial structure, backbone dynamics, interaction with bicelles and lipid-protein nanodiscs, and pore formation in context of barrel-stave model.
Chem.Biodivers., 10, 2013
1R9U
  • Download 1r9u
  • View 1r9u
Molmil generated image of 1r9u
REFINED STRUCTURE OF PEPTAIBOL ZERVAMICIN IIB IN METHANOL SOLUTION FROM TRANS-HYDROGEN BOND J COUPLINGS
Descriptor:ZERVAMICIN IIB
Authors:Shenkarev, Z.O., Balashova, T.A., Yakimenko, Z.A., Ovchinnikova, T.V., Arseniev, A.S.
Deposit date:2003-10-31
Release date:2004-11-09
Last modified:2018-10-10
Method:SOLUTION NMR
Cite:Biosynthetic Uniform 13C,15N-Labelling of Zervamicin Iib. Complete 13C and 15N NMR Assignment.
J.Pept.Sci., 9, 2003
2JWM
  • Download 2jwm
  • View 2jwm
Molmil generated image of 2jwm
NMR SPATIAL SRTUCTURE OF TERNARY COMPLEX KALATA B7/MN2+/DPC MICELLE
Descriptor:Kalata-B7
Authors:Nadezhdin, K.D., Shenkarev, Z.O., Skjeldal, L., Arseniev, A.S.
Deposit date:2007-10-16
Release date:2008-03-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Divalent cation coordination and mode of membrane interaction in cyclotides: NMR spatial structure of ternary complex Kalata B7/Mn(2+)/DPC micelle
J.Inorg.Biochem., 102, 2008
2KTN
  • Download 2ktn
  • View 2ktn
Molmil generated image of 2ktn
SPATIAL STRUCTURE OF LCH-ALPHA PEPTIDE FROM TWO-COMPONENT LANTIBIOTIC SYSTEM LICHENICIDIN VK21
Descriptor:LICHENICIDIN VK21 A1
Authors:Mineev, K.S., Shenkarev, Z.O., Ovchinnikova, T.V., Arseniev, A.S.
Deposit date:2010-02-05
Release date:2010-07-21
Last modified:2012-12-12
Method:SOLUTION NMR
Cite:Isolation, Structure Elucidation, and Synergistic Antibacterial Activity of a Novel Two-Component Lantibiotic Lichenicidin from Bacillus Licheniformis Vk21.
Biochemistry, 49, 2010
2KTO
  • Download 2kto
  • View 2kto
Molmil generated image of 2kto
SPATIAL STRUCTURE OF LCH-BETA PEPTIDE FROM TWO-COMPONENT LANTIBIOTIC LICHENICIDIN VK21
Descriptor:LCHB
Authors:Mineev, K.S., Shenkarev, Z.O., Ovchinnikova, T.V., Arseniev, A.S.
Deposit date:2010-02-05
Release date:2010-07-21
Last modified:2012-12-12
Method:SOLUTION NMR
Cite:Isolation, Structure Elucidation, and Synergistic Antibacterial Activity of a Novel Two-Component Lantibiotic Lichenicidin from Bacillus Licheniformis Vk21.
Biochemistry, 49, 2010
5LQV
  • Download 5lqv
  • View 5lqv
Molmil generated image of 5lqv
SPATIAL STRUCTURE OF THE LENTIL LIPID TRANSFER PROTEIN IN COMPLEX WITH ANIONIC LYSOLIPID LPPG
Descriptor:Non-specific lipid-transfer protein 2, 1-MYRISTOYL-2-HYDROXY-SN-GLYCERO-3-[PHOSPHO-RAC-(1-GLYCEROL)]
Authors:Mineev, K.S., Shenkarev, Z.O., Arseniev, A.S., Melnikova, D.N., Finkina, E.I., Ovchinnikova, T.V.
Deposit date:2016-08-17
Release date:2017-06-28
Method:SOLUTION NMR
Cite:Ligand Binding Properties of the Lentil Lipid Transfer Protein: Molecular Insight into the Possible Mechanism of Lipid Uptake.
Biochemistry, 56, 2017
1DLZ
  • Download 1dlz
  • View 1dlz
Molmil generated image of 1dlz
SOLUTION STRUCTURE OF THE CHANNEL-FORMER ZERVAMICIN IIB (PEPTAIBOL ANTIBIOTIC)
Descriptor:ZERVAMICIN IIB
Authors:Balashova, T.A., Shenkarev, Z.O., Tagaev, A.A., Ovchinnikova, T.V., Raap, J., Arseniev, A.S.
Deposit date:1999-12-13
Release date:2000-02-03
Last modified:2012-12-12
Method:SOLUTION NMR
Cite:NMR Structure of the Channel-Former Zervamicin Iib in Isotropic Solvents.
FEBS Lett., 466, 2000
1IMI
  • Download 1imi
  • View 1imi
Molmil generated image of 1imi
SOLUTION STRUCTURE OF ALPHA-CONOTOXIN IM1
Descriptor:PROTEIN (ALPHA-CONOTOXIN IMI)
Authors:Maslennikov, I.V., Shenkarev, Z.O., Zhmak, M.N., Tsetlin, V.I., Ivanov, V.T., Arseniev, A.S.
Deposit date:1998-11-27
Release date:1999-04-23
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR spatial structure of alpha-conotoxin ImI reveals a common scaffold in snail and snake toxins recognizing neuronal nicotinic acetylcholine receptors.
FEBS Lett., 444, 1999
2JNI
  • Download 2jni
  • View 2jni
Molmil generated image of 2jni
SPATIAL STRUCTURE OF ANTIMICROBIAL PEPTIDE ARENICIN-2 IN AQUEOUS SOLUTION
Descriptor:Arenicin-2
Authors:Ovchinnikova, T.V., Shenkarev, Z.O., Nadezhdin, K.D., Balandin, S.V., Zhmak, M.N., Kudelina, I.A., Finkina, E.I., Kokryakov, V.N., Arseniev, A.S.
Deposit date:2007-01-25
Release date:2007-08-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Recombinant expression, synthesis, purification, and solution structure of arenicin
Biochem.Biophys.Res.Commun., 360, 2007
2L03
  • Download 2l03
  • View 2l03
Molmil generated image of 2l03
SPATIAL STRUCTURE OF WATER-SOLUBLE LYNX1
Descriptor:Ly-6/neurotoxin-like protein 1
Authors:Mineev, K.S., Shenkarev, Z.O., Arseniev, A.S.
Deposit date:2010-06-30
Release date:2011-01-19
Last modified:2014-10-01
Method:SOLUTION NMR
Cite:NMR structure and action on nicotinic acetylcholine receptors of water-soluble domain of human LYNX1
J.Biol.Chem., 286, 2011
2MAL
  • Download 2mal
  • View 2mal
Molmil generated image of 2mal
SOLUTION STRUCTURE OF LIPID TRANSFER PROTEIN FROM LENTIL LENS CULINARIS
Descriptor:Non-specific lipid-transfer protein 2
Authors:Gizatullina, A.K., Mineev, K.S., Shenkarev, Z.O.
Deposit date:2013-07-16
Release date:2013-10-02
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Recombinant production and solution structure of lipid transfer protein from lentil Lens culinaris.
Biochem.Biophys.Res.Commun., 439, 2013
2MJ0
  • Download 2mj0
  • View 2mj0
Molmil generated image of 2mj0
SPATIAL STRUCTURE OF P33A MUTANT OF NON-CONVENTIONAL TOXIN WTX FROM NAJA KAOUTHIA
Descriptor:Weak tryptophan-containing neurotoxin
Authors:Paramonov, A.S., Shenkarev, Z.O., Lyukmanova, E.N.
Deposit date:2013-12-23
Release date:2014-12-24
Method:SOLUTION NMR
Cite:Interaction of Weak Toxin from Naja kaouthia with Muscarinic Acetylcholine Receptors: Mutagenesis, NMR and Modeling Study
To be Published
2MQU
  • Download 2mqu
  • View 2mqu
Molmil generated image of 2mqu
SPATIAL STRUCTURE OF HM-3, A MEMBRANE-ACTIVE SPIDER TOXIN AFFECTING SODIUM CHANNELS
Descriptor:Neurotoxin Hm-3
Authors:Myshkin, M.Y., Shenkarev, Z.O., Paramonov, A.S., Berkut, A.A., Grishin, E.V., Vassilevski, A.A.
Deposit date:2014-06-27
Release date:2014-11-05
Last modified:2019-02-20
Method:SOLUTION NMR
Cite:Structure of membrane-active toxin from crab spider Heriaeus melloteei suggests parallel evolution of sodium channel gating modifiers in Araneomorphae and Mygalomorphae.
J. Biol. Chem., 290, 2015
2MUO
  • Download 2muo
  • View 2muo
Molmil generated image of 2muo
STRUCTURE OF THE TRANS-(TYR39-PRO40) FORM OF THE HUMAN SECRETED LY-6/UPAR RELATED PROTEIN-1 (SLURP-1)
Descriptor:Secreted Ly-6/uPAR-related protein 1
Authors:Paramonov, A.S., Shenkarev, Z.O., Lyukmanova, E.N., Arseniev, A.S.
Deposit date:2014-09-15
Release date:2015-12-09
Last modified:2019-02-27
Method:SOLUTION NMR
Cite:Structural and Functional Properties of Human Secreted Ly-6/uPAR Related Protein-1 (SLURP-1) Imply a Non-Canonical Mode of Interaction with 7 nAChR
To be Published
2MUP
  • Download 2mup
  • View 2mup
Molmil generated image of 2mup
STRUCTURE OF THE CIS-(TYR39-PRO40) FORM OF THE HUMAN SECRETED LY-6/UPAR RELATED PROTEIN-1 (SLURP-1)
Descriptor:Secreted Ly-6/uPAR-related protein 1
Authors:Paramonov, A.S., Shenkarev, Z.O., Lyukmanova, E.N., Arseniev, A.S.
Deposit date:2014-09-15
Release date:2015-12-09
Last modified:2019-02-27
Method:SOLUTION NMR
Cite:Structural and Functional Properties of Human Secreted Ly-6/uPAR Related Protein-1 (SLURP-1) Imply a Non-Canonical Mode of Interaction with 7 nAChR
To be Published
2N81
  • Download 2n81
  • View 2n81
Molmil generated image of 2n81
SOLUTION STRUCTURE OF LIPID TRANSFER PROTEIN FROM PEA PISUM SATIVUM
Descriptor:Lipid Transfer Protein
Authors:Paramonov, A.S., Rumynskiy, E.I., Bogdanov, I.V., Finkina, E.I., Melnikova, D.N., Ovchinnikova, T.V., Shenkarev, Z.O., Arseniev, A.S.
Deposit date:2015-09-30
Release date:2016-05-11
Last modified:2017-12-20
Method:SOLUTION NMR
Cite:A novel lipid transfer protein from the pea Pisum sativum: isolation, recombinant expression, solution structure, antifungal activity, lipid binding, and allergenic properties.
BMC Plant Biol, 16
2N99
  • Download 2n99
  • View 2n99
Molmil generated image of 2n99
SOLUTION STRUCTURE OF THE SLURP-2, A SECRETED ISOFORM OF LYNX1
Descriptor:Ly-6/neurotoxin-like protein 1
Authors:Paramonov, A.S., Shenkarev, Z.O., Lyukmanova, E.N., Arseniev, A.S.
Deposit date:2015-11-11
Release date:2016-09-21
Method:SOLUTION NMR
Cite:Secreted Isoform of Human Lynx1 (SLURP-2): Spatial Structure and Pharmacology of Interactions with Different Types of Acetylcholine Receptors.
Sci Rep, 6, 2016
5M9U
  • Download 5m9u
  • View 5m9u
Molmil generated image of 5m9u
SPATIAL STRUCTURE OF ANTIMICROBIAL PEPTIDE ARENICIN-1 MUTANT V8R
Descriptor:Arenicin-1
Authors:Myshkin, M.Y., Shenkarev, Z.O., Panteleev, P.V., Ovchinnikova, T.V.
Deposit date:2016-11-02
Release date:2017-07-26
Method:SOLUTION NMR
Cite:Dimerization of the antimicrobial peptide arenicin plays a key role in the cytotoxicity but not in the antibacterial activity.
Biochem. Biophys. Res. Commun., 482, 2017
6HN9
  • Download 6hn9
  • View 6hn9
Molmil generated image of 6hn9
NICOMICIN-1 -- NOVEL ANTIMICROBIAL PEPTIDES FROM THE ARCTIC POLYCHAETA NICOMACHE MINOR PROVIDE NEW MOLECULAR INSIGHT INTO BIOLOGICAL ROLE OF THE BRICHOS DOMAIN
Descriptor:Nicomicin-1
Authors:Panteleev, P.V., Tsarev, A.V., Bolosov, I.A., Paramonov, A.S., Marggraf, M.B., Sychev, S.V., Shenkarev, Z.O., Ovchinnikova, T.V.
Deposit date:2018-09-14
Release date:2018-11-07
Method:SOLUTION NMR
Cite:Novel Antimicrobial Peptides from the Arctic PolychaetaNicomache minorProvide New Molecular Insight into Biological Role of the BRICHOS Domain.
Mar Drugs, 16, 2018
2LG4
  • Download 2lg4
  • View 2lg4
Molmil generated image of 2lg4
3D SOLUTION STRUCTURE OF ANTIMICROBIAL PEPTIDE AURELIN
Descriptor:Aurelin
Authors:Shenkarev, Z., Altukhov, D.
Deposit date:2011-07-20
Release date:2012-07-25
Last modified:2013-10-02
Method:SOLUTION NMR
Cite:Recombinant expression and solution structure of antimicrobial peptide aurelin from jellyfish Aurelia aurita.
Biochem.Biophys.Res.Commun., 429, 2012
2LJ7
  • Download 2lj7
  • View 2lj7
Molmil generated image of 2lj7
3D SOLUTION STRUCTURE OF PLANT DEFENSIN LC-DEF
Descriptor:Defensin Lc-def
Authors:Shenkarev, Z., Mineev, K., Gizatullina, A.
Deposit date:2011-09-07
Release date:2012-09-12
Last modified:2015-10-14
Method:SOLUTION NMR
Cite:Heterologous expression and solution structure of defensin from lentil Lens culinaris.
Biochem.Biophys.Res.Commun., 451, 2014
1G2G
  • Download 1g2g
  • View 1g2g
Molmil generated image of 1g2g
MINIMAL CONFORMATION OF THE ALPHA-CONOTOXIN IMI FOR THE ALPHA7 NEURONAL NICOTINIC ACETYLCHOLINE RECEPTOR RECOGNITION
Descriptor:ALPHA-CONOTOXIN IMI
Authors:Lamthanh, H., Jegou-Matheron, C., Servent, D., Menez, A., Lancelin, J.M.
Deposit date:2000-10-19
Release date:2000-11-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Minimal conformation of the alpha-conotoxin ImI for the alpha7 neuronal nicotinic acetylcholine receptor recognition: correlated CD, NMR and binding studies.
FEBS Lett., 454, 1999
<12>