Author results

1FKA
  • Download 1fka
  • View 1fka
Molmil generated image of 1fka
STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
Descriptor:16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ...
Authors:Schluenzen, F., Tocilj, A., Zarivach, R., Harms, J., Gluehmann, M., Janell, D., Bashan, A., Bartels, H., Agmon, I., Franceschi, F., Yonath, A.
Deposit date:2000-08-09
Release date:2000-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution.
Cell(Cambridge,Mass.), 102, 2000
1XBP
  • Download 1xbp
  • View 1xbp
Molmil generated image of 1xbp
INHIBITION OF PEPTIDE BOND FORMATION BY PLEUROMUTILINS: THE STRUCTURE OF THE 50S RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS IN COMPLEX WITH TIAMULIN
Descriptor:23S RIBOSOMAL RNA, 5S RIBOSOMAL RNA, 50S ribosomal protein L2, ...
Authors:Schluenzen, F., Pyetan, E., Fucini, P., Yonath, A., Harms, J.M.
Deposit date:2004-08-31
Release date:2005-03-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Inhibition of peptide bond formation by pleuromutilins: the structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with tiamulin.
Mol.Microbiol., 54, 2004
2HHH
  • Download 2hhh
  • View 2hhh
Molmil generated image of 2hhh
CRYSTAL STRUCTURE OF KASUGAMYCIN BOUND TO THE 30S RIBOSOMAL SUBUNIT
Descriptor:16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Schluenzen, F.
Deposit date:2006-06-28
Release date:2006-09-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:The antibiotic kasugamycin mimics mRNA nucleotides to destabilize tRNA binding and inhibit canonical translation initiation.
Nat.Struct.Mol.Biol., 13, 2006
1NKW
  • Download 1nkw
  • View 1nkw
Molmil generated image of 1nkw
CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS
Descriptor:23S ribosomal RNA, 5S ribosomal RNA, 50S ribosomal protein L2, ...
Authors:Harms, J.M., Schluenzen, F., Zarivach, R., Bashan, A., Gat, S., Agmon, I., Bartels, H., Franceschi, F., Yonath, A.
Deposit date:2003-01-05
Release date:2003-02-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:High resolution structure of the large ribosomal subunit from a mesophilic eubacterium
Cell(Cambridge,Mass.), 107, 2001
1NJM
  • Download 1njm
  • View 1njm
Molmil generated image of 1njm
THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH A TRNA ACCEPTOR STEM MIMIC (ASM) AND THE ANTIBIOTIC SPARSOMYCIN
Descriptor:23S ribosomal RNA, tRNA acceptor stem mimic, 50S ribosomal protein L16, ...
Authors:Bashan, A., Agmon, I., Zarivatch, R., Schluenzen, F., Harms, J.M., Berisio, R., Bartels, H., Hansen, H.A., Yonath, A.
Deposit date:2003-01-02
Release date:2003-02-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural basis of the ribosomal machinery for Peptide bond formation, translocation, and nascent chain progression
Mol.Cell, 11, 2003
1NJN
  • Download 1njn
  • View 1njn
Molmil generated image of 1njn
THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH THE ANTIBIOTIC SPARSOMYCIN
Descriptor:23S ribosomal RNA, SPARSOMYCIN
Authors:Bashan, A., Agmon, I., Zarivatch, R., Schluenzen, F., Harms, J.M., Berisio, R., Bartels, H., Hansen, H.A., Yonath, A.
Deposit date:2003-01-02
Release date:2003-02-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural basis of the ribosomal machinery for Peptide bond formation, translocation, and nascent chain progression
Mol.Cell, 11, 2003
1NJO
  • Download 1njo
  • View 1njo
Molmil generated image of 1njo
THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH A SHORT SUBSTRATE ANALOG ACCPUROMYCIN (ACCP)
Descriptor:23S ribosomal RNA, RNA ACC(Puromycin)
Authors:Bashan, A., Agmon, I., Zarivatch, R., Schluenzen, F., Harms, J.M., Berisio, R., Bartels, H., Hansen, H.A., Yonath, A.
Deposit date:2003-01-02
Release date:2003-02-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural basis of the ribosomal machinery for Peptide bond formation, translocation, and nascent chain progression
Mol.Cell, 11, 2003
1NJP
  • Download 1njp
  • View 1njp
Molmil generated image of 1njp
THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH A TRNA ACCEPTOR STEM MIMIC (ASM)
Descriptor:23S ribosomal RNA, tRNA acceptor stem mimic, 50S ribosomal protein L16, ...
Authors:Bashan, A., Agmon, I., Zarivatch, R., Schluenzen, F., Harms, J.M., Berisio, R., Bartels, H., Hansen, H.A., Yonath, A.
Deposit date:2003-01-02
Release date:2003-02-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural basis of the ribosomal machinery for Peptide bond formation, translocation, and nascent chain progression
Mol.Cell, 11, 2003
1OND
  • Download 1ond
  • View 1ond
Molmil generated image of 1ond
THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TROLEANDOMYCIN MACROLIDE ANTIBIOTIC
Descriptor:23S RIBOSOMAL RNA, 50S ribosomal protein L22, 50S ribosomal protein L32, ...
Authors:Berisio, R., Schluenzen, F., Harms, J., Bashan, A., Auerbach, T., Baram, D., Yonath, A.
Deposit date:2003-02-27
Release date:2003-04-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural insight into the role of the ribosomal tunnel in cellular regulation
Nat.Struct.Biol., 10, 2003
1P9X
  • Download 1p9x
  • View 1p9x
Molmil generated image of 1p9x
THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TELITHROMYCIN KETOLIDE ANTIBIOTIC
Descriptor:23S RIBOSOMAL RNA, TELITHROMYCIN
Authors:Berisio, R., Harms, J., Schluenzen, F., Zarivach, R., Hansen, H.A., Fucini, P., Yonath, A.
Deposit date:2003-05-13
Release date:2003-08-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural insight into the antibiotic action of telithromycin against resistant mutants
J.Bacteriol., 185, 2003
1Y69
  • Download 1y69
  • View 1y69
Molmil generated image of 1y69
RRF DOMAIN I IN COMPLEX WITH THE 50S RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS
Descriptor:23S ribosomal RNA, 5S ribosomal RNA, 50S ribosomal protein L16, ...
Authors:Wilson, D.N., Schluenzen, F., Harms, J.M., Yoshida, T., Ohkubo, T., Albrecht, R., Buerger, J., Kobayashi, Y., Fucini, P.
Deposit date:2004-12-04
Release date:2005-03-01
Last modified:2017-08-02
Method:X-RAY DIFFRACTION (3.33 Å)
Cite:X-ray crystallography on ribosome recycling: mechanism of binding and action of RRF on the 50S ribosomal subunit
EMBO J., 24, 2005
1ZAV
  • Download 1zav
  • View 1zav
Molmil generated image of 1zav
RIBOSOMAL PROTEIN L10-L12(NTD) COMPLEX, SPACE GROUP P21
Descriptor:50S ribosomal protein L10, 50S ribosomal protein L7/L12
Authors:Diaconu, M., Kothe, U., Schluenzen, F., Fischer, N., Harms, J.M., Tonevitski, A.G., Stark, H., Rodnina, M.V., Wahl, M.C.
Deposit date:2005-04-07
Release date:2005-07-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for the Function of the Ribosomal L7/12 Stalk in Factor Binding and GTPase Activation.
Cell(Cambridge,Mass.), 121, 2005
1ZAW
  • Download 1zaw
  • View 1zaw
Molmil generated image of 1zaw
RIBOSOMAL PROTEIN L10-L12(NTD) COMPLEX, SPACE GROUP P212121, FORM A
Descriptor:50S ribosomal protein L10, 50S ribosomal protein L7/L12
Authors:Diaconu, M., Kothe, U., Schluenzen, F., Fischer, N., Harms, J.M., Tonevitski, A.G., Stark, H., Rodnina, M.V., Wahl, M.C.
Deposit date:2005-04-07
Release date:2005-07-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for the Function of the Ribosomal L7/12 Stalk in Factor Binding and GTPase Activation.
Cell(Cambridge,Mass.), 121, 2005
1ZAX
  • Download 1zax
  • View 1zax
Molmil generated image of 1zax
RIBOSOMAL PROTEIN L10-L12(NTD) COMPLEX, SPACE GROUP P212121, FORM B
Descriptor:50S ribosomal protein L10, 50S ribosomal protein L7/L12
Authors:Diaconu, M., Kothe, U., Schluenzen, F., Fischer, N., Harms, J.M., Tonevitski, A.G., Stark, H., Rodnina, M.V., Wahl, M.C.
Deposit date:2005-04-07
Release date:2005-07-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for the Function of the Ribosomal L7/12 Stalk in Factor Binding and GTPase Activation.
Cell(Cambridge,Mass.), 121, 2005
2E5L
  • Download 2e5l
  • View 2e5l
Molmil generated image of 2e5l
A SNAPSHOT OF THE 30S RIBOSOMAL SUBUNIT CAPTURING MRNA VIA THE SHINE- DALGARNO INTERACTION
Descriptor:16S ribosomal RNA, 5'-R(*GP*AP*AP*AP*GP*A)-3', 30S ribosomal protein S2, ...
Authors:Kaminishi, T., Wilson, D.N., Takemoto, C., Harms, J.M., Kawazoe, M., Schluenzen, F., Hanawa-Suetsugu, K., Shirouzu, M., Fucini, P., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-21
Release date:2007-05-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A snapshot of the 30S ribosomal subunit capturing mRNA via the Shine-Dalgarno interaction
Structure, 15, 2007
2ZJP
  • Download 2zjp
  • View 2zjp
Molmil generated image of 2zjp
THIOPEPTIDE ANTIBIOTIC NOSIHEPTIDE BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF DEINOCOCCUS RADIODURANS
Descriptor:50S RIBOSOMAL PROTEIN L33, 50S RIBOSOMAL PROTEIN L34, 50S RIBOSOMAL PROTEIN L35, ...
Authors:Harms, J.M., Wilson, D.N., Schluenzen, F., Connell, S.R., Stachelhaus, T., Zaborowska, Z., Spahn, C.M.T., Fucini, P.
Deposit date:2008-03-07
Release date:2008-06-17
Last modified:2012-12-12
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Translational Regulation Via L11: Molecular Switches on the Ribosome Turned on and Off by Thiostrepton and Micrococcin.
Mol.Cell, 30, 2008
2ZJQ
  • Download 2zjq
  • View 2zjq
Molmil generated image of 2zjq
INTERACTION OF L7 WITH L11 INDUCED BY MICROCCOCIN BINDING TO THE DEINOCOCCUS RADIODURANS 50S SUBUNIT
Descriptor:ribosomal 23S RNA, ribosomal 5S RNA, 50S ribosomal protein L2, ...
Authors:Harms, J.M., Wilson, D.N., Schluenzen, F., Connell, S.R., Stachelhaus, T., Zaborowska, Z., Spahn, C.M.T., Fucini, P.
Deposit date:2008-03-08
Release date:2008-06-17
Last modified:2014-04-16
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Translational regulation via L11: molecular switches on the ribosome turned on and off by thiostrepton and micrococcin.
Mol.Cell, 30, 2008
2ZJR
  • Download 2zjr
  • View 2zjr
Molmil generated image of 2zjr
REFINED NATIVE STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT (50S) FROM DEINOCOCCUS RADIODURANS
Descriptor:ribosomal 23S RNA, ribosomal 5S RNA, 50S ribosomal protein L2, ...
Authors:Harms, J.M., Wilson, D.N., Schluenzen, F., Connell, S.R., Stachelhaus, T., Zaborowska, Z., Spahn, C.M.T., Fucini, P.
Deposit date:2008-03-08
Release date:2008-06-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Translational regulation via L11: molecular switches on the ribosome turned on and off by thiostrepton and micrococcin.
Mol.Cell, 30, 2008
3CF5
  • Download 3cf5
  • View 3cf5
Molmil generated image of 3cf5
THIOPEPTIDE ANTIBIOTIC THIOSTREPTON BOUND TO THE LARGE RIBOSOMAL SUBUNIT OF DEINOCOCCUS RADIODURANS
Descriptor:50S RIBOSOMAL PROTEIN L33, 50S RIBOSOMAL PROTEIN L34, 50S RIBOSOMAL PROTEIN L35, ...
Authors:Harms, J.M., Wilson, D.N., Schluenzen, F., Connell, S.R., Stachelhaus, T., Zaborowska, Z., Spahn, C.M.T., Fucini, P.
Deposit date:2008-03-02
Release date:2008-06-17
Last modified:2012-12-12
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Translational Regulation Via L11: Molecular Switches on the Ribosome Turned on and Off by Thiostrepton and Micrococcin.
Mol.Cell, 30, 2008
3DLL
  • Download 3dll
  • View 3dll
Molmil generated image of 3dll
THE OXAZOLIDINONE ANTIBIOTICS PERTURB THE RIBOSOMAL PEPTIDYL-TRANSFERASE CENTER AND EFFECT TRNA POSITIONING
Descriptor:rRNA-23S ribosomal RNA, rRNA-5S ribosomal RNA, 50S ribosomal protein L2, ...
Authors:Wilson, D.N., Schluenzen, F., Harms, J.M., Starosta, A.L., Connell, S.R., Fucini, P.
Deposit date:2008-06-27
Release date:2008-09-16
Last modified:2015-07-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA positioning
Proc.Natl.Acad.Sci.Usa, 105, 2008
4V61
  • Download 4v61
  • View 4v61
Molmil generated image of 4v61
HOMOLOGY MODEL FOR THE SPINACH CHLOROPLAST 30S SUBUNIT FITTED TO 9.4A CRYO-EM MAP OF THE 70S CHLORORIBOSOME.
Descriptor:16S rRNA, Ribosomal Protein S2, Ribosomal Protein S3, ...
Authors:Sharma, M.R., Wilson, D.N., Datta, P.P., Barat, C., Schluenzen, F., Fucini, P., Agrawal, R.K.
Deposit date:2007-11-09
Release date:2014-07-09
Last modified:2015-03-25
Method:ELECTRON MICROSCOPY (9.4 Å)
Cite:Cryo-EM study of the spinach chloroplast ribosome reveals the structural and functional roles of plastid-specific ribosomal proteins
Proc.Natl.Acad.Sci.Usa, 104, 2007
1I94
  • Download 1i94
  • View 1i94
Molmil generated image of 1i94
CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3
Descriptor:16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ...
Authors:Pioletti, M., Schluenzen, F., Harms, J., Zarivach, R., Gluehmann, M., Avila, H., Bartels, H., Jacobi, C., Hartsch, T., Yonath, A., Franceschi, F.
Deposit date:2001-03-18
Release date:2001-04-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.
EMBO J., 20, 2001
1I95
  • Download 1i95
  • View 1i95
Molmil generated image of 1i95
CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE
Descriptor:16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ...
Authors:Pioletti, M., Schluenzen, F., Harms, J., Zarivach, R., Gluehmann, M., Avila, H., Bartels, H., Jacobi, C., Hartsch, T., Yonath, A., Franceschi, F.
Deposit date:2001-03-18
Release date:2001-04-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.
EMBO J., 20, 2001
1I96
  • Download 1i96
  • View 1i96
Molmil generated image of 1i96
CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH THE TRANSLATION INITIATION FACTOR IF3 (C-TERMINAL DOMAIN)
Descriptor:16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ...
Authors:Pioletti, M., Schluenzen, F., Harms, J., Zarivach, R., Gluehmann, M., Avila, H., Bartels, H., Jacobi, C., Hartsch, T., Yonath, A., Franceschi, F.
Deposit date:2001-03-18
Release date:2001-04-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.
EMBO J., 20, 2001
1I97
  • Download 1i97
  • View 1i97
Molmil generated image of 1i97
CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
Descriptor:16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ...
Authors:Pioletti, M., Schluenzen, F., Harms, J., Zarivach, R., Gluehmann, M., Avila, H., Bartels, H., Jacobi, C., Hartsch, T., Yonath, A., Franceschi, F.
Deposit date:2001-03-18
Release date:2001-04-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.
EMBO J., 20, 2001
<12>
PDBj@FacebookPDBj@TwitterwwPDBwwPDB Foundation

Copyright © 2013-2019 Protein Data Bank Japan