Author results

4XRE
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CRYSTAL STRUCTURE OF GNK2 COMPLEXED WITH MANNOSE
Descriptor:Antifungal protein ginkbilobin-2, ALPHA-D-MANNOSE
Authors:Miyakawa, T., Hatano, K., Miyauchi, Y., Suwa, Y., Sawano, Y., Tanokura, M.
Deposit date:2015-01-21
Release date:2015-02-25
Method:X-RAY DIFFRACTION (2.597 Å)
Cite:A secreted protein with plant-specific cysteine-rich motif functions as a mannose-binding lectin that exhibits antifungal activity.
Plant Physiol., 166, 2014
3JRQ
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CRYSTAL STRUCTURE OF (+)-ABA-BOUND PYL1 IN COMPLEX WITH ABI1
Descriptor:Protein phosphatase 2C 56, Putative uncharacterized protein At5g46790, (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid
Authors:Miyazono, K., Miyakawa, T., Sawano, Y., Kubota, K., Tanokura, M.
Deposit date:2009-09-08
Release date:2009-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of abscisic acid signalling
Nature, 462, 2009
3JRS
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CRYSTAL STRUCTURE OF (+)-ABA-BOUND PYL1
Descriptor:Putative uncharacterized protein At5g46790, (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid
Authors:Miyazono, K., Miyakawa, T., Sawano, Y., Kubota, K., Tanokura, M.
Deposit date:2009-09-08
Release date:2009-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis of abscisic acid signalling
Nature, 462, 2009
1X25
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CRYSTAL STRUCTURE OF A MEMBER OF YJGF FAMILY FROM SULFOLOBUS TOKODAII (ST0811)
Descriptor:Hypothetical UPF0076 protein ST0811
Authors:Miyakawa, T., Lee, W.C., Hatano, K., Kato, Y., Sawano, Y., Miyazono, K., Nagata, K., Tanokura, M.
Deposit date:2005-04-20
Release date:2006-02-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the YjgF/YER057c/UK114 family protein from the hyperthermophilic archaeon Sulfolobus tokodaii strain 7
Proteins, 62, 2006
3D79
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CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN PH0734.1 FROM HYPERTHERMOPHILIC ARCHAEA PYROCOCCUS HORIKOSHII OT3
Descriptor:Putative uncharacterized protein PH0734
Authors:Nishimura, Y., Miyazono, K., Sawano, Y., Makino, T., Nagata, K., Tanokura, M.
Deposit date:2008-05-20
Release date:2008-12-09
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal structure of hypothetical protein PH0734.1 from hyperthermophilic archaea Pyrococcus horikoshii OT3.
Proteins, 73, 2008
3W9K
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CRYSTAL STRUCTURE OF THERMOACIDOPHILE-SPECIFIC PROTEIN STK_08120 COMPLEXED WITH MYRISTIC ACID
Descriptor:FATTY ACID-BINDING PROTEIN, MYRISTIC ACID
Authors:Miyakawa, T., Sawano, Y., Miyazono, K., Miyauchi, Y., Hatano, K., Tanokura, M.
Deposit date:2013-04-05
Release date:2013-07-17
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Thermoacidophile-Specific Protein Family, DUF3211, Functions as a Fatty Acid Carrier with Novel Binding Mode
J.Bacteriol., 2013
2EJX
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CRYSTAL STRUCTURE OF THE HYPOTHETICAL PROTEIN STK_08120 FROM SULFOLOBUS TOKODAII
Descriptor:STK_08120
Authors:Miyakawa, T., Miyazono, K., Sawano, Y., Hatano, K., Nagata, K., Tanokura, M.
Deposit date:2007-03-21
Release date:2008-03-25
Last modified:2013-11-06
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:A thermoacidophile-specific protein family, DUF3211, functions as a fatty acid carrier with novel binding mode
J.Bacteriol., 195, 2013
1Y43
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CRYSTAL STRUCTURE OF ASPERGILLOGLUTAMIC PEPTIDASE FROM ASPERGILLUS NIGER
Descriptor:Aspergillopepsin II light chain, Aspergillopepsin II heavy chain, SULFATE ION
Authors:Sasaki, H., Nakagawa, A., Iwata, S., Muramatsu, T., Suganuma, M., Sawano, Y., Kojima, M., Kubota, K., Takahashi, K.
Deposit date:2004-11-30
Release date:2005-12-13
Last modified:2013-02-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The three-dimensional structure of aspergilloglutamic peptidase from Aspergillus niger
Proc.Jpn.Acad.,Ser.B, 80, 2004
3A2E
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CRYSTAL STRUCTURE OF GINKBILOBIN-2, THE NOVEL ANTIFUNGAL PROTEIN FROM GINKGO BILOBA SEEDS
Descriptor:Ginkbilobin-2
Authors:Miyakawa, T., Miyazono, K., Sawano, Y., Hatano, K., Tanokura, M.
Deposit date:2009-05-13
Release date:2009-06-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal structure of ginkbilobin-2 with homology to the extracellular domain of plant cysteine-rich receptor-like kinases
Proteins, 77, 2009
3D7A
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CRYSTAL STRUCTURE OF DUF54 FAMILY PROTEIN PH1010 FROM HYPERTHERMOPHILIC ARCHAEA PYROCOCCUS HORIKOSHII OT3
Descriptor:UPF0201 protein PH1010
Authors:Shirokane, M., Miyazono, K.I., Sawano, Y., Tanokura, M.
Deposit date:2008-05-20
Release date:2008-12-09
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the DUF54 family protein PH1010 from hyperthermophilic archaea Pyrococcus horikoshii OT3.
Proteins, 74, 2008
5B0H
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CRYSTAL STRUCTURE OF HUMAN LEUKOCYTE CELL-DERIVED CHEMOTAXIN 2
Descriptor:Leukocyte cell-derived chemotaxin-2, ZINC ION, SULFATE ION
Authors:Zheng, H., Miyakawa, T., Sawano, Y., Tanokura, M.
Deposit date:2015-10-29
Release date:2016-07-06
Last modified:2016-09-07
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal Structure of Human Leukocyte Cell-derived Chemotaxin 2 (LECT2) Reveals a Mechanistic Basis of Functional Evolution in a Mammalian Protein with an M23 Metalloendopeptidase Fold
J.Biol.Chem., 291, 2016
3TZ1
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CRYSTAL STRUCTURE OF THE CA2+-SATURATED C-TERMINAL DOMAIN OF AKAZARA SCALLOP TROPONIN C IN COMPLEX WITH A TROPONIN I FRAGMENT
Descriptor:Troponin C, Troponin I, CALCIUM ION
Authors:Yumoto, F., Kato, Y.S., Ohtsuki, I., Tanokura, M.
Deposit date:2011-09-26
Release date:2013-01-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the Ca2+-saturated C-terminal domain of scallop troponin C in complex with a troponin I fragment
Biol.Chem., 394, 2012
1V3Z
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CRYSTAL STRUCTURE OF ACYLPHOSPHATASE FROM PYROCOCCUS HORIKOSHII
Descriptor:Acylphosphatase, POTASSIUM ION, CHLORIDE ION
Authors:Miyazono, K., Tanokura, M.
Deposit date:2003-11-07
Release date:2004-11-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structure of acylphosphatase from hyperthermophilic archaeon Pyrococcus horikoshii OT3
PROC.JPN.ACAD.,SER.B, 80, 2004
4TWL
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CRYSTAL STRUCTURE OF DIOSCORIN COMPLEXED WITH ASCORBATE
Descriptor:Dioscorin 5, SULFATE ION, ASCORBIC ACID
Authors:Xue, Y.L., Miyakawa, T., Nakamura, A., Tanokura, M.
Deposit date:2014-07-01
Release date:2015-04-01
Last modified:2015-08-05
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Yam Tuber Storage Protein Reduces Plant Oxidants Using the Coupled Reactions as Carbonic Anhydrase and Dehydroascorbate Reductase
Mol Plant, 8, 2015
4TWM
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CRYSTAL STRUCTURE OF DIOSCORIN FROM DIOSCOREA JAPONICA
Descriptor:Dioscorin 5, SULFATE ION
Authors:Xue, Y.L., Miyakawa, T., Nakamura, A., Tanokura, M.
Deposit date:2014-07-01
Release date:2015-04-01
Last modified:2015-08-05
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Yam Tuber Storage Protein Reduces Plant Oxidants Using the Coupled Reactions as Carbonic Anhydrase and Dehydroascorbate Reductase
Mol Plant, 8, 2015
5GMT
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CRYSTAL STRUCTURE OF THE MARINE PL-14 ALGINATE LYASE FROM APLYSIA KURODAI
Descriptor:Alginate lyase
Authors:Qin, H.-M., Miyakawa, T., Nakamura, A., Tanokura, M.
Deposit date:2016-07-16
Release date:2017-01-04
Last modified:2017-02-22
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structure and Polymannuronate Specificity of a Eukaryotic Member of Polysaccharide Lyase Family 14.
J. Biol. Chem., 292, 2017
5BUP
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CRYSTAL STRUCTURE OF THE ZP-C DOMAIN OF MOUSE ZP2
Descriptor:Zona pellucida sperm-binding protein 2, ACETATE ION
Authors:Nishimura, K., Jovine, L.
Deposit date:2015-06-04
Release date:2016-01-27
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (2.251 Å)
Cite:A structured interdomain linker directs self-polymerization of human uromodulin.
Proc.Natl.Acad.Sci.USA, 113, 2016
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