Author results

1K36
  • Download 1k36
  • View 1k36
Molmil generated image of 1k36
NMR STRUCTURE OF HUMAN EPIREGULIN
Descriptor:Epiregulin
Authors:Sato, K., Miura, K., Tada, M., Aizawa, T., Miyamoto, K., Kawano, K.
Deposit date:2001-10-02
Release date:2003-09-30
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of epiregulin and the effect of its C-terminal domain for receptor binding affinity
Febs Lett., 553, 2003
1K37
  • Download 1k37
  • View 1k37
Molmil generated image of 1k37
NMR STRUCTURE OF HUMAN EPIREGULIN
Descriptor:Epiregulin
Authors:Sato, K., Miura, K., Tada, M., Aizawa, T., Miyamoto, K., Kawano, K.
Deposit date:2001-10-02
Release date:2003-09-30
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of epiregulin and the effect of its C-terminal domain for receptor binding affinity
Febs Lett., 553, 2003
2VMJ
  • Download 2vmj
  • View 2vmj
Molmil generated image of 2vmj
TYPE 1 COPPER-BINDING LOOP OF NITRITE REDUCTASE MUTANT: 130- CAPEGMVPWHVVSGM-144 TO 130-CTPHPFM-136
Descriptor:DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE, ZINC ION, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
Authors:Sato, K., Firbank, S.J., Li, C., Banfield, M.J., Dennison, C.
Deposit date:2008-01-28
Release date:2008-12-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Importance of the Long Type 1 Copper-Binding Loop of Nitrite Reductase for Structure and Function.
Chemistry, 14, 2008
2VN3
  • Download 2vn3
  • View 2vn3
Molmil generated image of 2vn3
NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS
Descriptor:DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE, COPPER (II) ION, ZINC ION, ...
Authors:Sato, K., Firbank, S.J., Li, C., Banfield, M.J., Dennison, C.
Deposit date:2008-01-30
Release date:2008-12-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The Importance of the Long Type 1 Copper-Binding Loop of Nitrite Reductase for Structure and Function.
Chemistry, 14, 2008
5Y1A
  • Download 5y1a
  • View 5y1a
Molmil generated image of 5y1a
HBP35 OF PORPHYROMONAS GINGIVALIS
Descriptor:35 kDa hemin binding protein
Authors:Kakuda, S., Suzuki, M., Sato, K.
Deposit date:2017-07-20
Release date:2018-07-25
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Immunoglobulin-like domains of the cargo proteins are essential for protein stability during secretion by the type IX secretion system.
Mol. Microbiol., 110, 2018
4Z5T
  • Download 4z5t
  • View 4z5t
Molmil generated image of 4z5t
THE NUCLEOSOME CONTAINING HUMAN H3.5
Descriptor:Histone H3.3C, Histone H4, Histone H2A type 1-B/E, ...
Authors:Urahama, T., Harada, A., Maehara, K., Horikoshi, N., Sato, K., Sato, Y., Shiraishi, K., Sugino, N., Osakabe, A., Tachiwana, H., Kagawa, W., Kimura, H., Ohkawa, Y., Kurumizaka, H.
Deposit date:2015-04-03
Release date:2016-02-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Histone H3.5 forms an unstable nucleosome and accumulates around transcription start sites in human testis.
Epigenetics Chromatin, 9, 2016
1D6P
  • Download 1d6p
  • View 1d6p
Molmil generated image of 1d6p
HUMAN LYSOZYME L63 MUTANT LABELLED WITH 2',3'-EPOXYPROPYL N,N'-DIACETYLCHITOBIOSE
Descriptor:LYSOZYME, N-ACETYL-D-GLUCOSAMINE, GLYCEROL
Authors:Muraki, M., Harata, K., Sugita, N., Sato, K.
Deposit date:1999-10-15
Release date:2000-01-21
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Protein-carbohydrate interactions in human lysozyme probed by combining site-directed mutagenesis and affinity labeling.
Biochemistry, 39, 2000
1D6Q
  • Download 1d6q
  • View 1d6q
Molmil generated image of 1d6q
HUMAN LYSOZYME E102 MUTANT LABELLED WITH 2',3'-EPOXYPROPYL GLYCOSIDE OF N-ACETYLLACTOSAMINE
Descriptor:LYSOZYME, BETA-D-GALACTOSE, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Muraki, M., Harata, K., Sugita, N., Sato, K.
Deposit date:1999-10-15
Release date:2000-01-21
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Protein-carbohydrate interactions in human lysozyme probed by combining site-directed mutagenesis and affinity labeling.
Biochemistry, 39, 2000
2E42
  • Download 2e42
  • View 2e42
Molmil generated image of 2e42
CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER V285A MUTANT BOUND TO A HIGH AFFINITY DNA FRAGMENT
Descriptor:DNA (5'-D(P*DTP*DAP*DGP*DGP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DAP*DT)-3'), DNA (5'-D(P*DAP*DAP*DTP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DCP*DCP*DT)-3'), CCAAT/enhancer-binding protein beta
Authors:Tahirov, T.H., Inoue-Bungo, T., Sato, K., Shiina, M., Hamada, K., Ogata, K.
Deposit date:2006-12-01
Release date:2007-12-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for Flexible Base Recognition by C/Ebpbeta
To be Published
2E43
  • Download 2e43
  • View 2e43
Molmil generated image of 2e43
CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER K269A MUTANT BOUND TO A HIGH AFFINITY DNA FRAGMENT
Descriptor:DNA (5'-D(P*DTP*DAP*DGP*DGP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DAP*DT)-3'), DNA (5'-D(P*DAP*DAP*DTP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DCP*DCP*DT)-3'), CCAAT/enhancer-binding protein beta
Authors:Tahirov, T.H., Inoue-Bungo, T., Sato, K., Shiina, M., Hamada, K., Ogata, K.
Deposit date:2006-12-01
Release date:2007-12-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for Flexible Base Recognition by C/Ebpbeta
To be Published
3WMD
  • Download 3wmd
  • View 3wmd
Molmil generated image of 3wmd
CRYSTAL STRUCTURE OF EPOXIDE HYDROLASE MONBI
Descriptor:Probable monensin biosynthesis isomerase
Authors:Minami, A., Ose, T., Sato, K., Oikawa, A., Kuroki, K., Maenaka, K., Oguri, H., Oikawa, H.
Deposit date:2013-11-16
Release date:2014-01-15
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Allosteric regulation of epoxide opening cascades by a pair of epoxide hydrolases in monensin biosynthesis
Acs Chem.Biol., 9, 2014
1A13
  • Download 1a13
  • View 1a13
Molmil generated image of 1a13
G PROTEIN-BOUND CONFORMATION OF MASTOPARAN-X, NMR, 14 STRUCTURES
Descriptor:MASTOPARAN-X
Authors:Kusunoki, H., Wakamatsu, K., Sato, K., Miyazawa, T., Kohno, T.
Deposit date:1997-12-20
Release date:1999-01-13
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:G protein-bound conformation of mastoparan-X: heteronuclear multidimensional transferred nuclear overhauser effect analysis of peptide uniformly enriched with 13C and 15N.
Biochemistry, 37, 1998
1F3K
  • Download 1f3k
  • View 1f3k
Molmil generated image of 1f3k
THREE-DIMENSIONAL SOLUTION STRUCTURE OF OMEGA-CONOTOXIN TXVII, AN L-TYPE CALCIUM CHANNEL BLOCKER
Descriptor:OMEGA-CONOTOXIN TXVII
Authors:Kobayashi, K., Sasaki, T., Sato, K., Kohno, T.
Deposit date:2000-06-05
Release date:2000-12-13
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of omega-conotoxin TxVII, an L-type calcium channel blocker.
Biochemistry, 39, 2000
1IE6
  • Download 1ie6
  • View 1ie6
Molmil generated image of 1ie6
SOLUTION STRUCTURE OF IMPERATOXIN A
Descriptor:IMPERATOXIN A
Authors:Lee, C.W., Takeuchi, K., Takahashi, H., Sato, K., Shimada, I., Kim, D.H., Kim, J.I.
Deposit date:2001-04-07
Release date:2003-06-10
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Molecular basis of the high-affinity activation of type 1 ryanodine receptors by imperatoxin A.
Biochem.J., 377, 2004
1OMG
  • Download 1omg
  • View 1omg
Molmil generated image of 1omg
NMR STUDY OF OMEGA-CONOTOXIN MVIIA
Descriptor:OMEGA-CONOTOXIN MVIIA
Authors:Kohno, T., Kim, J.-I., Kobayashi, K., Kodera, Y., Maeda, T., Sato, K.
Deposit date:1995-04-26
Release date:1996-04-03
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Three-dimensional structure in solution of the calcium channel blocker omega-conotoxin MVIIA.
Biochemistry, 34, 1995
1QCM
  • Download 1qcm
  • View 1qcm
Molmil generated image of 1qcm
AMYLOID BETA PEPTIDE (25-35), NMR, 20 STRUCTURES
Descriptor:AMYLOID BETA PEPTIDE
Authors:Kohno, T., Kobayashi, K., Maeda, T., Sato, K., Takashima, A.
Deposit date:1996-07-19
Release date:1997-07-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Three-dimensional structures of the amyloid beta peptide (25-35) in membrane-mimicking environment.
Biochemistry, 35, 1996
1RE2
  • Download 1re2
  • View 1re2
Molmil generated image of 1re2
HUMAN LYSOZYME LABELLED WITH TWO 2',3'-EPOXYPROPYL BETA-GLYCOSIDE OF N-ACETYLLACTOSAMINE
Descriptor:PROTEIN (LYSOZYME), BETA-D-GALACTOSE, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Muraki, M., Harata, K., Sugita, N., Sato, K.
Deposit date:1998-11-05
Release date:1999-05-05
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Dual affinity labeling of the active site of human lysozyme with an N-acetyllactosamine derivative: first ligand assisted recognition of the second ligand.
Biochemistry, 38, 1999
1REM
  • Download 1rem
  • View 1rem
Molmil generated image of 1rem
HUMAN LYSOZYME WITH MAN-B1,4-GLCNAC COVALENTLY ATTACHED TO ASP53
Descriptor:LYSOZYME, BETA-D-MANNOSE, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Muraki, M., Harata, K., Sugita, N., Sato, K.
Deposit date:1998-01-14
Release date:1998-07-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray structure of human lysozyme labelled with 2',3'-epoxypropyl beta-glycoside of man-beta1,4-GlcNAc. Structural change and recognition specificity at subsite B.
Acta Crystallogr.,Sect.D, 54, 1998
1REY
  • Download 1rey
  • View 1rey
Molmil generated image of 1rey
HUMAN LYSOZYME-N,N'-DIACETYLCHITOBIOSE COMPLEX
Descriptor:LYSOZYME, N-ACETYL-D-GLUCOSAMINE, GLYCEROL
Authors:Muraki, M., Harata, K., Sugita, N., Sato, K.
Deposit date:1996-08-21
Release date:1997-02-12
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Origin of carbohydrate recognition specificity of human lysozyme revealed by affinity labeling.
Biochemistry, 35, 1996
1REZ
  • Download 1rez
  • View 1rez
Molmil generated image of 1rez
HUMAN LYSOZYME-N-ACETYLLACTOSAMINE COMPLEX
Descriptor:LYSOZYME, BETA-D-GALACTOSE, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Muraki, M., Harata, K., Sugita, N., Sato, K.
Deposit date:1996-08-21
Release date:1997-02-12
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Origin of carbohydrate recognition specificity of human lysozyme revealed by affinity labeling.
Biochemistry, 35, 1996
1V4Q
  • Download 1v4q
  • View 1v4q
Molmil generated image of 1v4q
THREE-DIMENSIONAL SOLUTION STRUCTURE OF THE ANALOGUE PEPTIDE OF OMEGA-CONOTOXIN MVIIC
Descriptor:omega-conotoxin MVIIC
Authors:Kobayashi, K., Sasaki, T., Sato, K., Kohno, T.
Deposit date:2003-11-17
Release date:2005-03-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the analogue peptide of omega-conotoxin MVIIC
To be Published
1WQB
  • Download 1wqb
  • View 1wqb
Molmil generated image of 1wqb
THREE-DIMENSIONAL SOLUTION STRUCUTRE OF APTOTOXIN VII, FROM THE VENOM OF A TRAP-DOOR SPIDER
Descriptor:Aptotoxin VII
Authors:Kobayashi, K., Kim, J.-I., Sato, K., Kohno, T.
Deposit date:2004-09-27
Release date:2005-12-13
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Three-dimensional Solution Structure of Aptotoxin VII, from the Venom of a Trap-door Spider
To be Published
2A6V
  • Download 2a6v
  • View 2a6v
Molmil generated image of 2a6v
CRYSTAL STRUCTURE OF EMP46P CARBOHYDRATE RECOGNITION DOMAIN (CRD), POTASSIUM-BOUND FORM
Descriptor:Emp46p, POTASSIUM ION, 1,2-ETHANEDIOL
Authors:Satoh, T., Sato, K., Kanoh, A., Yamashita, K., Kato, R., Nakano, A., Wakatsuki, S.
Deposit date:2005-07-04
Release date:2006-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006
2A6W
  • Download 2a6w
  • View 2a6w
Molmil generated image of 2a6w
CRYSTAL STRUCTURE OF EMP46P CARBOHYDRATE RECOGNITION DOMAIN (CRD), METAL-FREE FORM
Descriptor:Emp46p
Authors:Satoh, T., Sato, K., Kanoh, A., Yamashita, K., Kato, R., Nakano, A., Wakatsuki, S.
Deposit date:2005-07-04
Release date:2006-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006
2A6X
  • Download 2a6x
  • View 2a6x
Molmil generated image of 2a6x
CRYSTAL STRUCTURE OF EMP46P CARBOHYDRATE RECOGNITION DOMAIN (CRD), Y131F MUTANT
Descriptor:Emp46p, POTASSIUM ION, 1,2-ETHANEDIOL
Authors:Satoh, T., Sato, K., Kanoh, A., Yamashita, K., Kato, R., Nakano, A., Wakatsuki, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-04
Release date:2006-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006