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3J7I
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BU of 3j7i by Molmil
Structure of alpha- and beta- tubulin in GMPCPP-microtubules
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Tubulin alpha-1A chain, ...
Authors:Yajima, H, Ogura, T, Nitta, R, Okada, Y, Sato, C, Hirokawa, N.
Deposit date:2014-07-01
Release date:2014-12-10
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (8.9 Å)
Cite:Conformational changes in tubulin in GMPCPP and GDP-taxol microtubules observed by cryoelectron microscopy
J.Cell Biol., 198, 2012
3J6H
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BU of 3j6h by Molmil
Nucleotide-free Kinesin motor domain complexed with GMPCPP-microtubule
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Kinesin heavy chain isoform 5C, MAGNESIUM ION, ...
Authors:Morikawa, M, Yajima, H, Nitta, R, Inoue, S, Ogura, T, Sato, C, Hirokawa, N.
Deposit date:2014-02-21
Release date:2015-04-01
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (8.1 Å)
Cite:X-ray and Cryo-EM structures reveal mutual conformational changes of Kinesin and GTP-state microtubules upon binding
Embo J., 2015
3WBD
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BU of 3wbd by Molmil
Crystal structure of anti-polysialic acid antibody single chain Fv fragment (mAb735) complexed with octasialic acid
Descriptor: CITRATE ANION, N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid, single chain Fv fragment of mAb735
Authors:Nagae, M, Ikeda, A, Hanashima, S, Kitajima, K, Sato, C, Yamaguchi, Y.
Deposit date:2013-05-14
Release date:2013-10-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of anti-polysialic acid antibody single chain Fv fragment complexed with octasialic acid: insight into the binding preference for polysialic acid.
J.Biol.Chem., 288, 2013
3WOB
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BU of 3wob by Molmil
Crystal structure of a prostate-specific WGA16 glycoprotein lectin, form I
Descriptor: hypothetical protein
Authors:Garenaux, E, Kanagawa, M, Tsuchiyama, T, Hori, K, Kanazawa, T, Goshima, A, Chiba, M, Yasue, H, Ikeda, A, Yamaguchi, Y, Sato, C, Kitajima, K.
Deposit date:2013-12-26
Release date:2014-12-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Discovery, Primary, and Crystal Structures and Capacitation-related Properties of a Prostate-derived Heparin-binding Protein WGA16 from Boar Sperm
J.Biol.Chem., 290, 2015
3WOC
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BU of 3woc by Molmil
Crystal structure of a prostate-specific WGA16 glycoprotein lectin, form II
Descriptor: 1,4-DIETHYLENE DIOXIDE, GLYCEROL, SULFATE ION, ...
Authors:Garenaux, E, Kanagawa, M, Tsuchiyama, T, Hori, K, Kanazawa, T, Goshima, A, Chiba, M, Yasue, H, Ikeda, A, Yamaguchi, Y, Sato, C, Kitajima, K.
Deposit date:2013-12-26
Release date:2014-12-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery, Primary, and Crystal Structures and Capacitation-related Properties of a Prostate-derived Heparin-binding Protein WGA16 from Boar Sperm
J.Biol.Chem., 290, 2015
3A4K
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BU of 3a4k by Molmil
Crystal structural analysis of HindIII restriction endonuclease in complex with cognate DNA and divalent cations at 2.17 angstrom resolution
Descriptor: ACETATE ION, DNA (5'-D(*GP*CP*CP*A)-3'), DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3'), ...
Authors:Watanabe, N, Sato, C, Takasaki, Y, Tanaka, I.
Deposit date:2009-07-09
Release date:2009-10-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structures of restriction endonuclease HindIII in complex with its cognate DNA and divalent cations
Acta Crystallogr.,Sect.D, 65, 2009
2E52
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BU of 2e52 by Molmil
Crystal structural analysis of HindIII restriction endonuclease in complex with cognate DNA at 2.0 angstrom resolution
Descriptor: ACETATE ION, DNA (5'-D(*DGP*DCP*DCP*DAP*DAP*DGP*DCP*DTP*DTP*DGP*DGP*DC)-3'), GLYCEROL, ...
Authors:Watanabe, N, Sato, C, Tanaka, I.
Deposit date:2006-12-18
Release date:2007-12-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of restriction endonuclease HindIII in complex with its cognate DNA and divalent cations
Acta Crystallogr.,Sect.D, 65, 2009
6GF6
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BU of 6gf6 by Molmil
Molecular basis of egg coat filament cross-linking: high-resolution structure of the partially deglycosylated ZP1 ZP-N1 domain homodimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Zona pellucida sperm-binding protein 1,Zona pellucida sperm-binding protein 1
Authors:Nishimura, K, Jovine, L.
Deposit date:2018-04-29
Release date:2019-06-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility.
Nat Commun, 10, 2019
6GF7
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BU of 6gf7 by Molmil
Molecular basis of egg coat filament cross-linking: Zn-SAD structure of the partially deglycosylated ZP1 ZP-N1 domain homodimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ZINC ION, Zona pellucida sperm-binding protein 1,Zona pellucida sperm-binding protein 1
Authors:Nishimura, K, Jovine, L.
Deposit date:2018-04-29
Release date:2019-06-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility.
Nat Commun, 10, 2019
6GF8
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BU of 6gf8 by Molmil
Molecular basis of egg coat filament cross-linking: structure of the glycosylated ZP1 ZP-N1 domain homodimer
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Nishimura, K, Jovine, L.
Deposit date:2018-04-29
Release date:2019-06-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility.
Nat Commun, 10, 2019
2LWI
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BU of 2lwi by Molmil
Solution structure of H-RasT35S mutant protein in complex with Kobe2601
Descriptor: 2-(2,4-dinitrophenyl)-N-(4-fluorophenyl)hydrazinecarbothioamide, GTPase HRas, MAGNESIUM ION, ...
Authors:Araki, M, Tamura, A, Shima, F, Kataoka, T.
Deposit date:2012-08-01
Release date:2013-05-22
Last modified:2022-08-24
Method:SOLUTION NMR
Cite:In silico discovery of small-molecule Ras inhibitors that display antitumor activity by blocking the Ras-effector interaction.
Proc.Natl.Acad.Sci.USA, 110, 2013
4QTS
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BU of 4qts by Molmil
Crystal structure of Csm3-Csm4 subcomplex in the type III-A CRISPR-Cas interference complex
Descriptor: CRISPR type III-associated RAMP protein Csm3, CRISPR type III-associated RAMP protein Csm4, ZINC ION
Authors:Numata, T, Inanaga, H, Osawa, T.
Deposit date:2014-07-09
Release date:2014-12-24
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (3.105 Å)
Cite:Crystal structure of the Csm3-Csm4 subcomplex in the type III-A CRISPR-Cas interference complex.
J.Mol.Biol., 427, 2015
3NK4
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BU of 3nk4 by Molmil
Crystal structure of full-length sperm receptor ZP3 at 2.0 A resolution
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, CITRATE ANION, Zona pellucida 3
Authors:Monne, M, Jovine, L.
Deposit date:2010-06-18
Release date:2010-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into Egg Coat Assembly and Egg-Sperm Interaction from the X-Ray Structure of Full-Length ZP3.
Cell(Cambridge,Mass.), 143, 2010
3NK3
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BU of 3nk3 by Molmil
Crystal structure of full-length sperm receptor ZP3 at 2.6 A resolution
Descriptor: CITRATE ANION, Zona pellucida 3, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose
Authors:Monne, M, Jovine, L.
Deposit date:2010-06-18
Release date:2010-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights into Egg Coat Assembly and Egg-Sperm Interaction from the X-Ray Structure of Full-Length ZP3.
Cell(Cambridge,Mass.), 143, 2010
3WRD
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BU of 3wrd by Molmil
Crystal Structure of the KIF5C Motor Domain Without Any Nucleotide
Descriptor: Kinesin heavy chain isoform 5C, SULFATE ION
Authors:Inoue, S, Nitta, R, Hirokawa, N.
Deposit date:2014-02-21
Release date:2015-04-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:X-ray and Cryo-EM structures reveal mutual conformational changes of Kinesin and GTP-state microtubules upon binding
Embo J., 34, 2015
3X1L
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BU of 3x1l by Molmil
Crystal Structure of the CRISPR-Cas RNA Silencing Cmr Complex Bound to a Target Analog
Descriptor: CRISPR system Cmr subunit Cmr2, CRISPR system Cmr subunit Cmr3, CRISPR system Cmr subunit Cmr5, ...
Authors:Osawa, T, Numata, T.
Deposit date:2014-11-20
Release date:2015-05-13
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.096 Å)
Cite:Crystal structure of the CRISPR-Cas RNA silencing Cmr complex bound to a target analog.
Mol.Cell, 58, 2015
3X2T
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BU of 3x2t by Molmil
Crystal Structure of the KIF5C Motor Domain With ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Kinesin heavy chain isoform 5C
Authors:Inoue, S, Nitta, R, Hirokawa, N.
Deposit date:2015-01-02
Release date:2015-04-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:X-ray and Cryo-EM structures reveal mutual conformational changes of Kinesin and GTP-state microtubules upon binding
Embo J., 34, 2015

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