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6JR1
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BU of 6jr1 by Molmil
Crystal structure of the human nucleosome phased with 16 selenium atoms
Descriptor: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ...
Authors:Saotome, M, Horikoshi, N, Urano, K, Kujirai, T, Yuzurihara, H, Kurumizaka, H, Kagawa, W.
Deposit date:2019-04-02
Release date:2019-10-02
Last modified:2019-10-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure determination of the nucleosome core particle by selenium SAD phasing.
Acta Crystallogr D Struct Biol, 75, 2019
6JR0
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BU of 6jr0 by Molmil
Crystal structure of the human nucleosome phased with 12 selenium atoms
Descriptor: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ...
Authors:Saotome, M, Horikoshi, N, Urano, K, Kujirai, T, Yuzurihara, H, Kurumizaka, H, Kagawa, W.
Deposit date:2019-04-02
Release date:2019-10-02
Last modified:2019-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure determination of the nucleosome core particle by selenium SAD phasing.
Acta Crystallogr D Struct Biol, 75, 2019
5JRB
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BU of 5jrb by Molmil
Rad52(1-212) K102A/K133A/E202A mutant
Descriptor: DNA repair protein RAD52 homolog
Authors:Saotome, M, Saito, K, Kurumizaka, H, Kagawa, W.
Deposit date:2016-05-06
Release date:2016-08-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.405 Å)
Cite:Structure of the human DNA-repair protein RAD52 containing surface mutations.
Acta Crystallogr.,Sect.F, 72, 2016
5XRZ
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BU of 5xrz by Molmil
Structure of a ssDNA bound to the inner DNA binding site of RAD52
Descriptor: DNA repair protein RAD52 homolog, POTASSIUM ION, ssDNA (40-MER)
Authors:Saotome, M, Saito, K, Yasuda, T, Sugiyama, S, Kurumizaka, H, Kagawa, W.
Deposit date:2017-06-11
Release date:2018-04-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural Basis of Homology-Directed DNA Repair Mediated by RAD52
iScience, 3, 2018
5XS0
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BU of 5xs0 by Molmil
Structure of a ssDNA bound to the outer DNA binding site of RAD52
Descriptor: DNA repair protein RAD52 homolog, ssDNA (5'-D(*CP*CP*CP*CP*CP*C)-3'), ssDNA (5'-D(*CP*CP*CP*CP*CP*CP*CP*C)-3'), ...
Authors:Saotome, M, Saito, K, Yasuda, T, Sugiyama, S, Kurumizaka, H, Kagawa, W.
Deposit date:2017-06-11
Release date:2018-04-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis of Homology-Directed DNA Repair Mediated by RAD52
iScience, 3, 2018
8HE5
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BU of 8he5 by Molmil
RNA polymerase II elongation complex bound with Rad26 and Elf1, stalled at SHL(-3.5) of the nucleosome
Descriptor: DNA (198-MER), DNA repair protein, DNA-directed RNA polymerase subunit, ...
Authors:Osumi, K, Kujirai, T, Ehara, H, Kinoshita, C, Saotome, M, Kagawa, W, Sekine, S, Takizawa, Y, Kurumizaka, H.
Deposit date:2022-11-07
Release date:2023-07-05
Method:ELECTRON MICROSCOPY (6.95 Å)
Cite:Structural Basis of Damaged Nucleotide Recognition by Transcribing RNA Polymerase II in the Nucleosome.
J.Mol.Biol., 435, 2023
8H1P
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BU of 8h1p by Molmil
Cryo-EM structure of the human RAD52 protein
Descriptor: DNA repair protein RAD52 homolog
Authors:Kinoshita, C, Takizawa, Y, Saotome, M, Ogino, S, Kurumizaka, H, Kagawa, W.
Deposit date:2022-10-03
Release date:2023-02-08
Last modified:2023-03-22
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:The cryo-EM structure of full-length RAD52 protein contains an undecameric ring.
Febs Open Bio, 13, 2023
7WBX
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BU of 7wbx by Molmil
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-3) of the nucleosome
Descriptor: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ...
Authors:Osumi, K, Kujirai, T, Ehara, H, Sekine, S, Takizawa, Y, Kurumizaka, H.
Deposit date:2021-12-17
Release date:2023-07-05
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural Basis of Damaged Nucleotide Recognition by Transcribing RNA Polymerase II in the Nucleosome.
J.Mol.Biol., 435, 2023
7WBV
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BU of 7wbv by Molmil
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-4) of the nucleosome
Descriptor: DNA (159-MER), DNA (198-MER), DNA-directed RNA polymerase subunit, ...
Authors:Osumi, K, Kujirai, T, Ehara, H, Sekine, S, Takizawa, Y, Kurumizaka, H.
Deposit date:2021-12-17
Release date:2023-07-05
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural Basis of Damaged Nucleotide Recognition by Transcribing RNA Polymerase II in the Nucleosome.
J.Mol.Biol., 435, 2023
7WBW
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BU of 7wbw by Molmil
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-3.5) of the nucleosome
Descriptor: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ...
Authors:Osumi, K, Kujirai, T, Ehara, H, Sekine, S, Takizawa, Y, Kurumizaka, H.
Deposit date:2021-12-17
Release date:2023-07-05
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Structural Basis of Damaged Nucleotide Recognition by Transcribing RNA Polymerase II in the Nucleosome.
J.Mol.Biol., 435, 2023

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