Author results

3H79
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CRYSTAL STRUCTURE OF TRYPANOSOMA CRUZI THIOREDOXIN-LIKE HYPOTHETICAL PROTEIN Q4DV70
Descriptor:Thioredoxin-like protein, THIOCYANATE ION
Authors:Santos, C.R., Fessel, M.R., Vieira, L.C., Krieger, M.A., Goldenberg, S., Guimaraes, B.G., Zanchin, N.I.T., Barbosa, J.A.R.G.
Deposit date:2009-04-24
Release date:2009-05-12
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of Trypanosoma cruzi thioredoxin-like hypothetical protein Q4DV70
TO BE PUBLISHED
3N8T
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NATIVE STRUCTURE OF TK1436, A GH57 BRANCHING ENZYME FROM HYPERTHERMOPHILIC ARCHAEON THERMOCOCCUS KODAKARAENSIS
Descriptor:alpha-amylase, GH57 family, DI(HYDROXYETHYL)ETHER, ...
Authors:Santos, C.R., Tonoli, C.C.C., Trindade, D.M., Betzel, C., Takata, H., Kuriki, T., Kanai, T., Imanaka, T., Arni, R.K., Murakami, M.T.
Deposit date:2010-05-28
Release date:2010-10-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for branching-enzyme activity of glycoside hydrolase family 57: Structure and stability studies of a novel branching enzyme from the hyperthermophilic archaeon Thermococcus Kodakaraensis KOD1.
Proteins, 79, 2011
3N92
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CRYSTAL STRUCTURE OF TK1436, A GH57 BRANCHING ENZYME FROM HYPERTHERMOPHILIC ARCHAEON THERMOCOCCUS KODAKARAENSIS, IN COMPLEX WITH GLUCOSE
Descriptor:alpha-amylase, GH57 family, BETA-D-GLUCOSE
Authors:Santos, C.R., Tonoli, C.C.C., Trindade, D.M., Betzel, C., Takata, H., Kuriki, T., Kanai, T., Imanaka, T., Arni, R.K., Murakami, M.T.
Deposit date:2010-05-28
Release date:2010-10-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural basis for branching-enzyme activity of glycoside hydrolase family 57: Structure and stability studies of a novel branching enzyme from the hyperthermophilic archaeon Thermococcus Kodakaraensis KOD1.
Proteins, 79, 2011
3N98
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CRYSTAL STRUCTURE OF TK1436, A GH57 BRANCHING ENZYME FROM HYPERTHERMOPHILIC ARCHAEON THERMOCOCCUS KODAKARAENSIS, IN COMPLEX WITH GLUCOSE AND ADDITIVES
Descriptor:alpha-amylase, GH57 family, BETA-D-GLUCOSE, ...
Authors:Santos, C.R., Tonoli, C.C.C., Trindade, D.M., Betzel, C., Takata, H., Kuriki, T., Kanai, T., Imanaka, T., Arni, R.K., Murakami, M.T.
Deposit date:2010-05-28
Release date:2010-10-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural basis for branching-enzyme activity of glycoside hydrolase family 57: Structure and stability studies of a novel branching enzyme from the hyperthermophilic archaeon Thermococcus Kodakaraensis KOD1.
Proteins, 79, 2011
3NIY
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CRYSTAL STRUCTURE OF NATIVE XYLANASE 10B FROM THERMOTOGA PETROPHILA RKU-1
Descriptor:Endo-1,4-beta-xylanase, SULFATE ION, ACETATE ION
Authors:Santos, C.R., Meza, A.N., Trindade, D.M., Ruller, R., Squina, F.M., Prade, R.A., Murakami, M.T.
Deposit date:2010-06-16
Release date:2011-05-04
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Thermal-induced conformational changes in the product release area drive the enzymatic activity of xylanases 10B: Crystal structure, conformational stability and functional characterization of the xylanase 10B from Thermotoga petrophila RKU-1.
Biochem.Biophys.Res.Commun., 403, 2010
3NJ3
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CRYSTAL STRUCTURE OF XYLANASE 10B FROM THERMOTOGA PETROPHILA RKU-1 IN COMPLEX WITH XYLOBIOSE
Descriptor:Endo-1,4-beta-xylanase, ACETATE ION, SULFATE ION, ...
Authors:Santos, C.R., Meza, A.N., Trindade, D.M., Ruller, R., Squina, F.M., Prade, R.A., Murakami, M.T.
Deposit date:2010-06-16
Release date:2011-05-04
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Thermal-induced conformational changes in the product release area drive the enzymatic activity of xylanases 10B: Crystal structure, conformational stability and functional characterization of the xylanase 10B from Thermotoga petrophila RKU-1.
Biochem.Biophys.Res.Commun., 403, 2010
3PZ9
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NATIVE STRUCTURE OF ENDO-1,4-BETA-D-MANNANASE FROM THERMOTOGA PETROPHILA RKU-1
Descriptor:Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5
Authors:Santos, C.R., Meza, A.N., Paiva, J.H., Silva, J.C., Ruller, R., Prade, R.A., Squina, F.M., Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
3PZG
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I222 CRYSTAL FORM OF THE HYPERTHERMOSTABLE ENDO-1,4-BETA-D-MANNANASE FROM THERMOTOGA PETROPHILA RKU-1
Descriptor:Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ...
Authors:Santos, C.R., Meza, A.N., Paiva, J.H., Silva, J.C., Ruller, R., Prade, R.A., Squina, F.M., Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
3PZI
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STRUCTURE OF THE HYPERTHERMOSTABLE ENDO-1,4-BETA-D-MANNANASE FROM THERMOTOGA PETROPHILA RKU-1 IN COMPLEX WITH BETA-D-GLUCOSE
Descriptor:Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5, BETA-D-GLUCOSE
Authors:Santos, C.R., Meza, A.N., Paiva, J.H., Silva, J.C., Ruller, R., Prade, R.A., Squina, F.M., Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
3PZM
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STRUCTURE OF THE HYPERTHERMOSTABLE ENDO-1,4-BETA-D-MANNANASE FROM THERMOTOGA PETROPHILA RKU-1 WITH THREE GLYCEROL MOLECULES
Descriptor:Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5, GLYCEROL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
Authors:Santos, C.R., Meza, A.N., Paiva, J.H., Silva, J.C., Ruller, R., Prade, R.A., Squina, F.M., Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
3PZN
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STRUCTURE OF THE HYPERTHERMOSTABLE ENDO-1,4-BETA-D-MANNANASE FROM THERMOTOGA PETROPHILA RKU-1 WITH CITRATE AND GLYCEROL
Descriptor:Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5, CITRIC ACID, GLYCEROL
Authors:Santos, C.R., Meza, A.N., Paiva, J.H., Silva, J.C., Ruller, R., Prade, R.A., Squina, F.M., Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
3PZO
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STRUCTURE OF THE HYPERTHERMOSTABLE ENDO-1,4-BETA-D-MANNANASE FROM THERMOTOGA PETROPHILA RKU-1 IN COMPLEX WITH THREE MALTOSE MOLECULES
Descriptor:Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5, GLYCEROL, MALTOSE
Authors:Santos, C.R., Meza, A.N., Paiva, J.H., Silva, J.C., Ruller, R., Prade, R.A., Squina, F.M., Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
3PZQ
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STRUCTURE OF THE HYPERTHERMOSTABLE ENDO-1,4-BETA-D-MANNANASE FROM THERMOTOGA PETROPHILA RKU-1 WITH MALTOSE AND GLYCEROL
Descriptor:Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5, MALTOSE
Authors:Santos, C.R., Meza, A.N., Paiva, J.H., Silva, J.C., Ruller, R., Prade, R.A., Squina, F.M., Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
3PZT
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STRUCTURE OF THE ENDO-1,4-BETA-GLUCANASE FROM BACILLUS SUBTILIS 168 WITH MANGANESE(II) ION
Descriptor:Endoglucanase, MANGANESE (II) ION, GLYCEROL, ...
Authors:Santos, C.R., Paiva, J.H., Akao, P.K., Meza, A.N., Silva, J.C., Squina, F.M., Ward, R.J., Ruller, R., Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-09-14
Last modified:2011-12-28
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168.
Biochem.J., 441, 2012
3PZU
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P212121 CRYSTAL FORM OF THE ENDO-1,4-BETA-GLUCANASE FROM BACILLUS SUBTILIS 168
Descriptor:Endoglucanase, GLYCEROL
Authors:Santos, C.R., Paiva, J.H., Akao, P.K., Meza, A.N., Silva, J.C., Squina, F.M., Ward, R.J., Ruller, R., Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-09-14
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168.
Biochem.J., 441, 2012
3PZV
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C2 CRYSTAL FORM OF THE ENDO-1,4-BETA-GLUCANASE FROM BACILLUS SUBTILIS 168
Descriptor:Endoglucanase
Authors:Santos, C.R., Paiva, J.H., Akao, P.K., Meza, A.N., Silva, J.C., Squina, F.M., Ward, R.J., Ruller, R., Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-09-14
Last modified:2011-12-28
Method:X-RAY DIFFRACTION (2.867 Å)
Cite:Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168.
Biochem.J., 441, 2012
4EKJ
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CRYSTAL STRUCTURE OF A MONOMERIC BETA-XYLOSIDASE FROM CAULOBACTER CRESCENTUS CB15
Descriptor:Beta-xylosidase, SULFATE ION
Authors:Santos, C.R., Polo, C.C., Correa, J.M., Simao, R.C.G., Seixas, F.A.V., Murakami, M.T.
Deposit date:2012-04-09
Release date:2012-09-26
Last modified:2013-01-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The accessory domain changes the accessibility and molecular topography of the catalytic interface in monomeric GH39 beta-xylosidases.
Acta Crystallogr.,Sect.D, 68, 2012
4KCA
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CRYSTAL STRUCTURE OF ENDO-1,5-ALPHA-L-ARABINANASE FROM A BOVINE RUMINAL METAGENOMIC LIBRARY
Descriptor:Endo-1,5-alpha-L-arabinanase, IODIDE ION, GLYCEROL, ...
Authors:Santos, C.R., Polo, C.C., Costa, M.C.M.F., Nascimento, A.F.Z., Wong, D.W.S., Murakami, M.T.
Deposit date:2013-04-24
Release date:2014-02-05
Last modified:2014-04-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases.
J.Biol.Chem., 289, 2014
4KCB
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CRYSTAL STRUCTURE OF EXO-1,5-ALPHA-L-ARABINANASE FROM BOVINE RUMINAL METAGENOMIC LIBRARY
Descriptor:Arabinan endo-1,5-alpha-L-arabinosidase, PHOSPHATE ION
Authors:Santos, C.R., Polo, C.C., Costa, M.C.M.F., Nascimento, A.F.Z., Wong, D.W.S., Murakami, M.T.
Deposit date:2013-04-24
Release date:2014-02-05
Last modified:2014-04-09
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases.
J.Biol.Chem., 289, 2014
4PMU
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CRYSTAL STRUCTURE OF A NOVEL REDUCING-END XYLOSE-RELEASING EXO-OLIGOXYLANASE (XYNA) BELONGING TO GH10 FAMILY (SPACE GROUP P1211)
Descriptor:Endo-1,4-beta-xylanase A
Authors:Santos, C.R., Martins, V.P.M., Zanphorlin, L.M., Ruller, R., Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2019-02-13
Method:X-RAY DIFFRACTION (2.857 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMV
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CRYSTAL STRUCTURE OF A NOVEL REDUCING-END XYLOSE-RELEASING EXO-OLIGOXYLANASE (XYNA) BELONGING TO GH10 FAMILY (SPACE GROUP P43212)
Descriptor:Endo-1,4-beta-xylanase A
Authors:Santos, C.R., Martins, V.P.M., Zanphorlin, L.M., Ruller, R., Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2019-02-13
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMX
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CRYSTAL STRUCTURE OF GH10 ENDO-B-1,4-XYLANASE (XYNB) FROM XANTHOMONAS AXONOPODIS PV CITRI IN THE NATIVE FORM
Descriptor:Xylanase, CALCIUM ION
Authors:Santos, C.R., Martins, V.P.M., Zanphorlin, L.M., Ruller, R., Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2018-11-07
Method:X-RAY DIFFRACTION (1.304 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMY
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CRYSTAL STRUCTURE OF GH10 ENDO-B-1,4-XYLANASE (XYNB) FROM XANTHOMONAS AXONOPODIS PV CITRI COMPLEXED WITH XYLOSE
Descriptor:Xylanase, BETA-D-XYLOPYRANOSE, GLYCEROL, ...
Authors:Santos, C.R., Martins, V.P.M., Zanphorlin, L.M., Ruller, R., Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMZ
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CRYSTAL STRUCTURE OF GH10 ENDO-B-1,4-XYLANASE (XYNB) FROM XANTHOMONAS AXONOPODIS PV CITRI COMPLEXED WITH XYLOBIOSE
Descriptor:Xylanase, CALCIUM ION, 4-O-beta-D-xylopyranosyl-beta-D-xylopyranose
Authors:Santos, C.R., Martins, V.P.M., Zanphorlin, L.M., Ruller, R., Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PN2
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CRYSTAL STRUCTURE OF GH10 ENDO-B-1,4-XYLANASE (XYNB) FROM XANTHOMONAS AXONOPODIS PV CITRI COMPLEXED WITH XYLOTRIOSE
Descriptor:Xylanase, CALCIUM ION, BETA-D-XYLOPYRANOSE
Authors:Santos, C.R., Martins, V.P.M., Zanphorlin, L.M., Ruller, R., Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014