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2APQ
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BU of 2apq by Molmil
Crystal Structure of an Active Site Mutant of Bovine Pancreatic Ribonuclease A (H119A-RNase A) with a 10-Glutamine expansion in the C-terminal hinge-loop.
Descriptor: PHOSPHATE ION, Ribonuclease
Authors:Sambashivan, S, Liu, Y, Sawaya, M.R, Gingery, M, Eisenberg, D.
Deposit date:2005-08-16
Release date:2005-09-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Amyloid-like fibrils of ribonuclease A with three-dimensional domain-swapped and native-like structure.
Nature, 437, 2005
2ON9
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BU of 2on9 by Molmil
Structure of an amyloid forming peptide VQIVYK from the repeat region of Tau
Descriptor: VQIVYK peptide corresponding to residues 306-311 in the tau protein
Authors:Sambashivan, S, Sawaya, M.R, Eisenberg, D.
Deposit date:2007-01-23
Release date:2007-01-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
2ONA
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BU of 2ona by Molmil
MVGGVV peptide derived from Alzheimer's A-beta, residues 35-40
Descriptor: MVGGVV peptide derived from Alzheimer's A-beta, residues 35-40
Authors:Sambashivan, S, Sawaya, M.R, Eisenberg, D.
Deposit date:2007-01-23
Release date:2007-01-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
2ONV
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BU of 2onv by Molmil
Crystal Structure of the amyloid-fibril forming peptide GGVVIA derived from the Alzheimer's amyloid Abeta (Abeta37-42).
Descriptor: amyloid-fibril forming peptide GGVVIA derived from the Alzheimer's amyloid Abeta
Authors:Sambashivan, S, Sawaya, M.R, Eisenberg, D.
Deposit date:2007-01-24
Release date:2007-02-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
2ONW
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BU of 2onw by Molmil
Structure of SSTSSA, a fibril forming peptide from Bovine Pancreatic Ribonuclease (RNase A, residues 15-20)
Descriptor: fibril forming peptide from Bovine Pancreatic Ribonuclease (RNase A)
Authors:Sambashivan, S, Sawaya, M.R, Eisenberg, D.
Deposit date:2007-01-24
Release date:2007-02-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
6WPK
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BU of 6wpk by Molmil
SARM1 Autoinhibited Conformation
Descriptor: NAD(+) hydrolase SARM1
Authors:Xie, T, Bratkowski, M, Bai, X, Sambashivan, S.
Deposit date:2020-04-27
Release date:2020-08-12
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural and Mechanistic Regulation of the Prodegenerative NAD Hydrolase SARM1
Cell Rep, 32, 2020
2ONX
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BU of 2onx by Molmil
NNQQ peptide corresponding to residues 8-11 of yeast prion sup35 (alternate crystal form)
Descriptor: peptide corresponding to residues 8-11 of yeast prion sup35
Authors:Sawaya, M.R, Sambashivan, S, Nelson, R, Ivanova, M, Sievers, S.A, Apostol, M.I, Thompson, M.J, Balbirnie, M, Wiltzius, J.J, McFarlane, H, Madsen, A.O, Riekel, C, Eisenberg, D.
Deposit date:2007-01-24
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
2OKZ
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BU of 2okz by Molmil
MVGGVV peptide derived from Alzheimer's A-beta
Descriptor: peptide from Alzheimer's A-beta
Authors:Sawaya, M.R, Sambashivan, S, Eisenberg, D.
Deposit date:2007-01-18
Release date:2007-01-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
6B8O
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BU of 6b8o by Molmil
WT Ig-like V Domain with Phosphatidylserine
Descriptor: 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Sudom, A, Wang, Z.
Deposit date:2017-10-09
Release date:2018-06-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular basis for the loss-of-function effects of the Alzheimer's disease-associated R47H variant of the immune receptor TREM2.
J. Biol. Chem., 293, 2018
5UD8
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BU of 5ud8 by Molmil
Crystal Structure of Mutant Ig-like Domain
Descriptor: Triggering receptor expressed on myeloid cells 2
Authors:Sudom, A, Min, X, Wang, Z.
Deposit date:2016-12-23
Release date:2018-04-04
Last modified:2019-04-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular basis for the loss-of-function effects of the Alzheimer's disease-associated R47H variant of the immune receptor TREM2.
J. Biol. Chem., 293, 2018
5UD7
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BU of 5ud7 by Molmil
Crystal Structure of Wild-Type Ig-like Domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, IODIDE ION, SULFATE ION, ...
Authors:Sudom, A, Min, X, Wang, Z.
Deposit date:2016-12-23
Release date:2018-04-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.20002246 Å)
Cite:Molecular basis for the loss-of-function effects of the Alzheimer's disease-associated R47H variant of the immune receptor TREM2.
J. Biol. Chem., 293, 2018
8D0E
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BU of 8d0e by Molmil
Human SARM1 TIR domain bound to NB-7
Descriptor: 3-(4-chlorophenyl)-N-[4-methyl-3-(pyridin-4-yl)-1H-pyrazol-5-yl]propanamide, NAD(+) hydrolase SARM1
Authors:Bratkowski, M.A, Mathur, P.
Deposit date:2022-05-26
Release date:2022-09-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Uncompetitive, adduct-forming SARM1 inhibitors are neuroprotective in preclinical models of nerve injury and disease.
Neuron, 110, 2022
8D0J
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BU of 8d0j by Molmil
Apo Human SARM1 TIR domain
Descriptor: NAD(+) hydrolase SARM1
Authors:Bratkowski, M.A, Mathur, P.
Deposit date:2022-05-26
Release date:2022-09-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Uncompetitive, adduct-forming SARM1 inhibitors are neuroprotective in preclinical models of nerve injury and disease.
Neuron, 110, 2022
8D0I
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BU of 8d0i by Molmil
Human SARM1 bound to an NB-3 eADPR adduct
Descriptor: NAD(+) hydrolase SARM1, [[(2~{R},3~{S},4~{R},5~{R})-5-imidazo[2,1-f]purin-3-yl-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-[4-[(1~{S})-1-[methyl-[2,2,2-tris(fluoranyl)ethylcarbamoyl]amino]ethyl]pyridin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Bratkowski, M.A, Mathur, P.
Deposit date:2022-05-26
Release date:2022-09-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Uncompetitive, adduct-forming SARM1 inhibitors are neuroprotective in preclinical models of nerve injury and disease.
Neuron, 110, 2022
8D0M
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BU of 8d0m by Molmil
Human CD38 ectodomain bound to a 78c-ADPR adduct
Descriptor: ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-[5-[4-[[4-(2-methoxyethoxy)cyclohexyl]amino]-1-methyl-2-oxidanylidene-quinolin-6-yl]-1,3-thiazol-3-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Bratkowski, M.A, Gu, W.
Deposit date:2022-05-26
Release date:2022-09-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Uncompetitive, adduct-forming SARM1 inhibitors are neuroprotective in preclinical models of nerve injury and disease.
Neuron, 110, 2022
8D0H
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BU of 8d0h by Molmil
Human SARM1 TIR domain bound to NB-3-GDPR
Descriptor: NAD(+) hydrolase SARM1, [[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-3~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-[4-[(1~{S})-1-[methyl-[2,2,2-tris(fluoranyl)ethylcarbamoyl]amino]ethyl]pyridin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Bratkowski, M.A, Mathur, P.
Deposit date:2022-05-26
Release date:2022-09-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Uncompetitive, adduct-forming SARM1 inhibitors are neuroprotective in preclinical models of nerve injury and disease.
Neuron, 110, 2022
8D0D
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BU of 8d0d by Molmil
Human SARM1 TIR domain bound to an NB-7-ADPR adduct
Descriptor: NAD(+) hydrolase SARM1, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R})-5-[4-[3-[3-(4-chlorophenyl)propanoylamino]-4-methyl-1~{H}-pyrazol-5-yl]pyridin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Bratkowski, M.A, Mathur, P.
Deposit date:2022-05-26
Release date:2022-09-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Uncompetitive, adduct-forming SARM1 inhibitors are neuroprotective in preclinical models of nerve injury and disease.
Neuron, 110, 2022
8D0F
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BU of 8d0f by Molmil
Human SARM1 TIR domain bound to NB-2-ADPR
Descriptor: NAD(+) hydrolase SARM1, [[(3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-[4-[[methyl-[2,2,2-tris(fluoranyl)ethylcarbamoyl]amino]methyl]pyridin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Bratkowski, M.A, Mathur, P.
Deposit date:2022-05-26
Release date:2022-09-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Uncompetitive, adduct-forming SARM1 inhibitors are neuroprotective in preclinical models of nerve injury and disease.
Neuron, 110, 2022
8D0G
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BU of 8d0g by Molmil
Human SARM1 TIR domain bound to NB-3-ADPRP
Descriptor: NAD(+) hydrolase SARM1, [[(2~{R},3~{R},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3-oxidanyl-4-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-[4-[(1~{S})-1-[methyl-[2,2,2-tris(fluoranyl)ethylcarbamoyl]amino]ethyl]pyridin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Bratkowski, M.A, Mathur, P.
Deposit date:2022-05-26
Release date:2022-09-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Uncompetitive, adduct-forming SARM1 inhibitors are neuroprotective in preclinical models of nerve injury and disease.
Neuron, 110, 2022
8D0C
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BU of 8d0c by Molmil
Human SARM1 TIR domain bound to NB-3-ADPR
Descriptor: NAD(+) hydrolase SARM1, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-[4-[(1~{S})-1-[methyl-[2,2,2-tris(fluoranyl)ethylcarbamoyl]amino]ethyl]pyridin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Bratkowski, M.A, Mathur, P.
Deposit date:2022-05-26
Release date:2022-09-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Uncompetitive, adduct-forming SARM1 inhibitors are neuroprotective in preclinical models of nerve injury and disease.
Neuron, 110, 2022
2OMM
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BU of 2omm by Molmil
GNNQQNY peptide corresponding to residues 7-13 of yeast prion sup35
Descriptor: GNNQQNY peptide corresponding to residues 7-13 of yeast prion sup35
Authors:Sawaya, M.R, Nelson, R, Eisenberg, D.
Deposit date:2007-01-22
Release date:2007-01-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
2OMQ
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BU of 2omq by Molmil
VEALYL peptide derived from human insulin chain B, residues 12-17
Descriptor: VEALYL peptide derived from human insulin chain B, residues 12-17
Authors:Ivanova, M, Sawaya, M.R, Eisenberg, D.
Deposit date:2007-01-22
Release date:2007-01-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
2OLX
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BU of 2olx by Molmil
Structure of NNQQ Peptide from Yeast Prion SUP35
Descriptor: NNQQ peptide derived from Yeast Prion Sup35
Authors:Nelson, R, Sawaya, M.R, Eisenberg, D.
Deposit date:2007-01-19
Release date:2007-01-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
2OL9
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BU of 2ol9 by Molmil
Peptide corresponding to residues 170-175 of human prion
Descriptor: peptide from human prion
Authors:Apostol, M.A, Sawaya, M.R, Eisenberg, D.
Deposit date:2007-01-18
Release date:2007-01-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
2OMP
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BU of 2omp by Molmil
LYQLEN peptide derived from human insulin chain A, residues 13-18
Descriptor: LYQLEN peptide derived from human insulin chain A, residues 13-18
Authors:Ivanova, M.I, Sawaya, M.R, Eisenberg, D.
Deposit date:2007-01-22
Release date:2007-01-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007

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