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5FIS
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BU of 5fis by Molmil
Exonuclease domain-containing 1 (Exd1) in the Gd bound conformation
Descriptor: EXD1, GADOLINIUM ATOM
Authors:Yang, Z, Chen, K.M, Pandey, R.R, Homolka, D, Reuter, M, Rodino Janeiro, B.K, Sachidanandam, R, Fauvarque, M.O, McCarthy, A.A, Pillai, R.S.
Deposit date:2015-10-02
Release date:2015-12-23
Last modified:2016-01-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Piwi Slicing and Exd1 Drive Biogenesis of Nuclear Pirnas from Cytosolic Targets of the Mouse Pirna Pathway
Mol.Cell, 61, 2016
5FIQ
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BU of 5fiq by Molmil
Exonuclease domain-containing 1 (Exd1) in the native conformation
Descriptor: EXD1
Authors:Yang, Z, Chen, K.M, Pandey, R.R, Homolka, D, Reuter, M, Rodino Janeiro, B.K, Sachidanandam, R, Fauvarque, M.O, McCarthy, A.A, Pillai, R.S.
Deposit date:2015-10-01
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Piwi Slicing and Exd1 Drive Biogenesis of Nuclear Pirnas from Cytosolic Targets of the Mouse Pirna Pathway
Mol.Cell, 61, 2016
5O8M
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BU of 5o8m by Molmil
Crystal structure of the MmI1 YTH domain
Descriptor: GLYCEROL, YTH domain-containing protein mmi1
Authors:Brettschneider, J, Verdel, A, Kadlec, J.
Deposit date:2017-06-13
Release date:2018-04-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Selective termination of lncRNA transcription promotes heterochromatin silencing and cell differentiation.
EMBO J., 36, 2017
4QUF
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BU of 4quf by Molmil
crystal structure of chromodomain of Rhino with H3K9me3
Descriptor: H3(1-15)K9me3 peptide, RE36324p
Authors:Li, S, Patel, D.J.
Deposit date:2014-07-10
Release date:2014-08-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Transgenerationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing.
Genes Dev., 28, 2014
7CFB
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BU of 7cfb by Molmil
Drosophila melanogaster Krimper eTud1 apo structure
Descriptor: FI20010p1, SULFATE ION
Authors:Hu, H, Li, S.
Deposit date:2020-06-25
Release date:2021-06-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Binding of guide piRNA triggers methylation of the unstructured N-terminal region of Aub leading to assembly of the piRNA amplification complex.
Nat Commun, 12, 2021
7CFC
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BU of 7cfc by Molmil
Drosophila melanogaster Krimper eTud1-Ago3 complex
Descriptor: FI20010p1, Protein argonaute-3
Authors:Hu, H, Li, S.
Deposit date:2020-06-25
Release date:2021-06-02
Last modified:2021-09-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Binding of guide piRNA triggers methylation of the unstructured N-terminal region of Aub leading to assembly of the piRNA amplification complex.
Nat Commun, 12, 2021
7CFD
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BU of 7cfd by Molmil
Drosophila melanogaster Krimper eTud2-AubR15me2 complex
Descriptor: FI20010p1, Protein aubergine
Authors:Hu, H, Li, S.
Deposit date:2020-06-25
Release date:2021-06-02
Last modified:2021-09-15
Method:X-RAY DIFFRACTION (2.704 Å)
Cite:Binding of guide piRNA triggers methylation of the unstructured N-terminal region of Aub leading to assembly of the piRNA amplification complex.
Nat Commun, 12, 2021
4D26
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BU of 4d26 by Molmil
Crystal structure of the Bombyx mori Vasa helicase (E339Q) in complex with RNA,ADP and Pi
Descriptor: 5'-R(*UP*GP*AP*CP*AP*UP)-3', ADENOSINE-5'-DIPHOSPHATE, BMVLG PROTEIN, ...
Authors:Spinelli, P, Pillai, R.S, Kadlec, J, Cusack, S.
Deposit date:2014-05-07
Release date:2014-06-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:RNA Clamping by Vasa Assembles a Pirna Amplifier Complex on Transposon Transcripts.
Cell(Cambridge,Mass.), 157, 2014
4D25
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BU of 4d25 by Molmil
Crystal structure of the Bombyx mori Vasa helicase (E339Q) in complex with RNA and AMPPNP
Descriptor: 5'-R(*UP*GP*AP*CP*AP*UP)-3', BMVLG PROTEIN, GLYCEROL, ...
Authors:Spinelli, P, Pillai, R.S, Kadlec, J, Cusack, S.
Deposit date:2014-05-07
Release date:2014-06-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:RNA Clamping by Vasa Assembles a Pirna Amplifier Complex on Transposon Transcripts.
Cell(Cambridge,Mass.), 157, 2014
4P1Z
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BU of 4p1z by Molmil
Structure of the MID domain from MIWI
Descriptor: Piwi-like protein 1
Authors:Cora, E, McCarthy, A.A, Pillai, R.S.
Deposit date:2014-02-28
Release date:2014-05-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The MID-PIWI module of Piwi proteins specifies nucleotide- and strand-biases of piRNAs.
Rna, 20, 2014
4QUC
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BU of 4quc by Molmil
Crystal structure of chromodomain of Rhino
Descriptor: RE36324p
Authors:Li, S, Patel, D.J.
Deposit date:2014-07-10
Release date:2014-08-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Transgenerationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing.
Genes Dev., 28, 2014

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PDB entries from 2024-04-17

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