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5WKA
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BU of 5wka by Molmil
Crystal structure of a GH1 beta-glucosidase retrieved from microbial metagenome of Poraque Amazon lake
Descriptor: Beta-glucosidase, DI(HYDROXYETHYL)ETHER, GLYCEROL
Authors:Morais, M.A.B, Toyama, D, Ramos, F.C, Zanphorlin, L.M, Tonoli, C.C.C, Miranda, F.P, Ruller, R, Henrique-Silva, F, Murakami, M.T.
Deposit date:2017-07-24
Release date:2018-03-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A novel beta-glucosidase isolated from the microbial metagenome of Lake Poraque (Amazon, Brazil).
Biochim. Biophys. Acta, 1866, 2018
4DFS
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BU of 4dfs by Molmil
Structure of the catalytic domain of an endo-1,3-beta-glucanase (laminarinase) from Thermotoga petrophila RKU-1
Descriptor: CALCIUM ION, Glycoside hydrolase, family 16, ...
Authors:Meza, A.N, Ruller, R, Prade, R.A, Squina, F.M, Santos, C.R, Murakami, M.T.
Deposit date:2012-01-24
Release date:2012-03-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.754 Å)
Cite:Structural studies of an endo-1,3-beta-glucanase from Thermotoga petrophila RKU-1
To be Published
1XXN
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BU of 1xxn by Molmil
Crystal structure of a mesophilic xylanase A from Bacillus subtilis 1A1
Descriptor: Endo-1,4-beta-xylanase A, S,R MESO-TARTARIC ACID
Authors:Murakami, M.T, Ruller, R, Ward, R.J, Arni, R.K.
Deposit date:2004-11-07
Release date:2005-10-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Correlation of temperature induced conformation change with optimum catalytic activity in the recombinant G/11 xylanase A from Bacillus subtilis strain 168 (1A1).
Febs Lett., 579, 2005
3S2C
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BU of 3s2c by Molmil
Structure of the thermostable GH51 alpha-L-arabinofuranosidase from Thermotoga petrophila RKU-1
Descriptor: Alpha-N-arabinofuranosidase
Authors:Souza, T.A.C.B, Santos, C.R, Souza, A.R, Oldiges, D.P, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T.
Deposit date:2011-05-16
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of a novel thermostable GH51 Alpha-L-arabinofuranosidase from Thermotoga petrophila RKU-1
Protein Sci., 20, 2011
4KC8
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BU of 4kc8 by Molmil
Crystal Structure of Endo-1,5-alpha-L-arabinanase from Thermotoga petrophila RKU-1 in complex with TRIS
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Glycoside hydrolase, ...
Authors:Nascimento, A.F.Z, Polo, C.C, Santos, C.R, Costa, M.C.M.F, Mesa, A.N, Prade, R.A, Ruller, R, Squina, F.M, Murakami, M.T.
Deposit date:2013-04-24
Release date:2014-02-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases.
J.Biol.Chem., 289, 2014
5BWF
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BU of 5bwf by Molmil
Crystal structure of the beta-glucosidase from Trichoderma harzianum
Descriptor: Beta-1,4-glucosidase, GLYCEROL, SULFATE ION
Authors:Santos, C.A, Zanphorlin, L.M, Crucello, A, Tonoli, C.C.C, Ruller, R, Souza, A.P, Murakami, M.T.
Deposit date:2015-06-07
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the beta-glucosidase from Trichoderma harzianum
To Be Published
4KC7
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BU of 4kc7 by Molmil
Crystal Structure of Endo-1,5-alpha-L-arabinanase from Thermotoga petrophila RKU-1
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Glycoside hydrolase, ...
Authors:Nascimento, A.F.Z, Polo, C.C, Santos, C.R, Costa, M.C.M.F, Mesa, A.N, Prade, R.A, Ruller, R, Squina, F.M, Murakami, M.T.
Deposit date:2013-04-24
Release date:2014-02-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases.
J.Biol.Chem., 289, 2014
4M1R
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BU of 4m1r by Molmil
Structure of a novel cellulase 5 from a sugarcane soil metagenomic library
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cellulase 5
Authors:Paiva, J.H, Alvarez, T.M, Cairo, J.P, Paixao, D.A, Almeida, R.A, Tonoli, C.C.C, Ruiz, D.M, Ruller, R, Santos, C.R, Squina, F.M, Murakami, M.T.
Deposit date:2013-08-03
Release date:2014-02-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and function of a novel cellulase 5 from sugarcane soil metagenome.
Plos One, 8, 2013
4PN2
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BU of 4pn2 by Molmil
Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylotriose
Descriptor: CALCIUM ION, Xylanase, beta-D-xylopyranose
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMY
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BU of 4pmy by Molmil
Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylose
Descriptor: CALCIUM ION, GLYCEROL, Xylanase, ...
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMX
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BU of 4pmx by Molmil
Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri in the native form
Descriptor: CALCIUM ION, Xylanase
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.304 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMV
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BU of 4pmv by Molmil
Crystal structure of a novel reducing-end xylose-releasing exo-oligoxylanase (XynA) belonging to GH10 family (space group P43212)
Descriptor: Endo-1,4-beta-xylanase A
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMU
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BU of 4pmu by Molmil
Crystal structure of a novel reducing-end xylose-releasing exo-oligoxylanase (XynA) belonging to GH10 family (space group P1211)
Descriptor: Endo-1,4-beta-xylanase A
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.857 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMZ
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BU of 4pmz by Molmil
Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylobiose
Descriptor: CALCIUM ION, Xylanase, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
3NIY
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BU of 3niy by Molmil
Crystal structure of native xylanase 10B from Thermotoga petrophila RKU-1
Descriptor: ACETATE ION, Endo-1,4-beta-xylanase, SULFATE ION
Authors:Santos, C.R, Meza, A.N, Trindade, D.M, Ruller, R, Squina, F.M, Prade, R.A, Murakami, M.T.
Deposit date:2010-06-16
Release date:2011-05-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Thermal-induced conformational changes in the product release area drive the enzymatic activity of xylanases 10B: Crystal structure, conformational stability and functional characterization of the xylanase 10B from Thermotoga petrophila RKU-1.
Biochem.Biophys.Res.Commun., 403, 2010
3NJ3
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BU of 3nj3 by Molmil
Crystal structure of xylanase 10B from Thermotoga petrophila RKU-1 in complex with xylobiose
Descriptor: ACETATE ION, Endo-1,4-beta-xylanase, SULFATE ION, ...
Authors:Santos, C.R, Meza, A.N, Trindade, D.M, Ruller, R, Squina, F.M, Prade, R.A, Murakami, M.T.
Deposit date:2010-06-16
Release date:2011-05-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Thermal-induced conformational changes in the product release area drive the enzymatic activity of xylanases 10B: Crystal structure, conformational stability and functional characterization of the xylanase 10B from Thermotoga petrophila RKU-1.
Biochem.Biophys.Res.Commun., 403, 2010
3PZM
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BU of 3pzm by Molmil
Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 with three glycerol molecules
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5
Authors:Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
3PZ9
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BU of 3pz9 by Molmil
Native structure of endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
Descriptor: Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5
Authors:Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
3PZO
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BU of 3pzo by Molmil
Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 in complex with three maltose molecules
Descriptor: GLYCEROL, Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
3PZU
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BU of 3pzu by Molmil
P212121 crystal form of the endo-1,4-beta-glucanase from Bacillus subtilis 168
Descriptor: Endoglucanase, GLYCEROL
Authors:Santos, C.R, Paiva, J.H, Akao, P.K, Meza, A.N, Silva, J.C, Squina, F.M, Ward, R.J, Ruller, R, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-09-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168.
Biochem.J., 441, 2012
3PZQ
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BU of 3pzq by Molmil
Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 with maltose and glycerol
Descriptor: Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
3PZI
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BU of 3pzi by Molmil
Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 in complex with beta-D-glucose
Descriptor: Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5, beta-D-glucopyranose
Authors:Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
3PZN
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BU of 3pzn by Molmil
Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 with citrate and glycerol
Descriptor: CITRIC ACID, GLYCEROL, Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5
Authors:Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published
3PZT
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BU of 3pzt by Molmil
Structure of the endo-1,4-beta-glucanase from Bacillus subtilis 168 with manganese(II) ion
Descriptor: Endoglucanase, GLYCEROL, MANGANESE (II) ION, ...
Authors:Santos, C.R, Paiva, J.H, Akao, P.K, Meza, A.N, Silva, J.C, Squina, F.M, Ward, R.J, Ruller, R, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-09-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168.
Biochem.J., 441, 2012
3PZG
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BU of 3pzg by Molmil
I222 crystal form of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5, ...
Authors:Santos, C.R, Meza, A.N, Paiva, J.H, Silva, J.C, Ruller, R, Prade, R.A, Squina, F.M, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-12-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1
To be Published

 

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