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423D
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5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3'
Descriptor:DNA (5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3'), MAGNESIUM ION
Authors:Rozenberg, H., Rabinovich, D., Frolow, F., Hegde, R.S., Shakked, Z.
Deposit date:1998-09-14
Release date:1999-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural code for DNA recognition revealed in crystal structures of papillomavirus E2-DNA targets.
Proc.Natl.Acad.Sci.USA, 95, 1998
424D
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5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3'
Descriptor:DNA (5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3')
Authors:Rozenberg, H., Rabinovich, D., Frolow, F., Hegde, R.S., Shakked, Z.
Deposit date:1998-09-14
Release date:1999-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural code for DNA recognition revealed in crystal structures of papillomavirus E2-DNA targets.
Proc.Natl.Acad.Sci.USA, 95, 1998
425D
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5'-D(*AP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*T)-3'
Descriptor:DNA (5'-D(*AP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*T)-3')
Authors:Rozenberg, H., Rabinovich, D., Frolow, F., Hegde, R.S., Shakked, Z.
Deposit date:1998-09-14
Release date:1999-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural code for DNA recognition revealed in crystal structures of papillomavirus E2-DNA targets.
Proc.Natl.Acad.Sci.USA, 95, 1998
3D06
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HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R249S (I)
Descriptor:Cellular tumor antigen p53, ZINC ION
Authors:Rozenberg, H., Suad, O., Shimon, L.J.W., Frolow, F., Shakked, Z.
Deposit date:2008-05-01
Release date:2009-01-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural basis of restoring sequence-specific DNA binding and transactivation to mutant p53 by suppressor mutations
J.Mol.Biol., 385, 2009
3D09
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HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R249S AND SECOND-SITE SUPPRESSOR MUTATIONS H168R AND T123A
Descriptor:Cellular tumor antigen p53, ZINC ION
Authors:Rozenberg, H., Suad, O., Shakked, Z.
Deposit date:2008-05-01
Release date:2009-01-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of restoring sequence-specific DNA binding and transactivation to mutant p53 by suppressor mutations
J.Mol.Biol., 385, 2009
3KZ8
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DIVERSITY IN DNA RECOGNITION BY P53 REVEALED BY CRYSTAL STRUCTURES WITH HOOGSTEEN BASE PAIRS (P53-DNA COMPLEX 3)
Descriptor:Cellular tumor antigen p53, DNA (5'-D(*TP*GP*GP*GP*CP*AP*TP*GP*CP*CP*CP*GP*GP*GP*CP*AP*TP*GP*CP*CP*C)-3'), ZINC ION, ...
Authors:Rozenberg, H., Suad, O., Shakked, Z.
Deposit date:2009-12-08
Release date:2010-03-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs
Nat.Struct.Mol.Biol., 17, 2010
4IBQ
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HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273C
Descriptor:Cellular tumor antigen p53, ZINC ION, ACETATE ION, ...
Authors:Rozenberg, H., Eldar, A., Diskin-Posner, Y., Shakked, Z.
Deposit date:2012-12-09
Release date:2013-08-14
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural studies of p53 inactivation by DNA-contact mutations and its rescue by suppressor mutations via alternative protein-DNA interactions.
Nucleic Acids Res., 41, 2013
4IBS
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HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273H (FORM I)
Descriptor:Cellular tumor antigen p53, ZINC ION, 1,2-ETHANEDIOL
Authors:Rozenberg, H., Eldar, A., Diskin-Posner, Y., Shakked, Z.
Deposit date:2012-12-09
Release date:2013-08-14
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural studies of p53 inactivation by DNA-contact mutations and its rescue by suppressor mutations via alternative protein-DNA interactions.
Nucleic Acids Res., 41, 2013
4IJT
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HUMAN P53 CORE DOMAIN WITH HOT SPOT MUTATION R273H (FORM II)
Descriptor:Cellular tumor antigen p53, ZINC ION, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ...
Authors:Rozenberg, H., Eldar, A., Diskin-Posner, Y., Shakked, Z.
Deposit date:2012-12-23
Release date:2013-08-14
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural studies of p53 inactivation by DNA-contact mutations and its rescue by suppressor mutations via alternative protein-DNA interactions.
Nucleic Acids Res., 41, 2013
4P3C
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MT1-MMP:FAB COMPLEX (FORM I)
Descriptor:Heavy Chain Fab fragment of antibody LEM-2/15, Light Chain Fab fragment of antibody LEM-2/15, Matrix metalloproteinase-14, ...
Authors:Rozenberg, H., Udi, Y., Sagi, I.
Deposit date:2014-03-06
Release date:2014-12-17
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (1.943 Å)
Cite:Inhibition mechanism of membrane metalloprotease by an exosite-swiveling conformational antibody.
Structure, 23, 2015
4P3D
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MT1-MMP:FAB COMPLEX (FORM II)
Descriptor:Heavy Chain Fab fragment of antibody LEM-2/15, Light Chain Fab fragment of antibody LEM-2/15, Matrix metalloproteinase-14, ...
Authors:Rozenberg, H., Udi, Y., Sagi, I.
Deposit date:2014-03-07
Release date:2014-12-17
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:Inhibition mechanism of membrane metalloprotease by an exosite-swiveling conformational antibody.
Structure, 23, 2015
5MF7
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NEW INSIGHTS INTO THE ROLE OF DNA SHAPE ON ITS RECOGNITION BY P53 PROTEINS (COMPLEX P53DBD-GADD45)
Descriptor:Cellular tumor antigen p53, DNA, ZINC ION, ...
Authors:Rozenberg, H., Diskin-Posner, Y., Golovenko, D., Shakked, Z.
Deposit date:2016-11-17
Release date:2018-05-30
Last modified:2019-01-02
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:New Insights into the Role of DNA Shape on Its Recognition by p53 Proteins.
Structure, 26, 2018
5MG7
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NEW INSIGHTS INTO THE ROLE OF DNA SHAPE ON ITS RECOGNITION BY P53 PROTEINS (COMPLEX P53DBD-P53R2)
Descriptor:Cellular tumor antigen p53, DNA, ZINC ION
Authors:Rozenberg, H., Braeuning, B., Golovenko, D., Shakked, Z.
Deposit date:2016-11-21
Release date:2018-06-13
Last modified:2019-10-30
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:New Insights into the Role of DNA Shape on Its Recognition by p53 Proteins.
Structure, 26, 2018
3PIO
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CRYSTAL STRUCTURE OF THE SYNERGISTIC ANTIBIOTIC PAIR LANKAMYCIN AND LANKACIDIN IN COMPLEX WITH THE LARGE RIBOSOMAL SUBUNIT
Descriptor:RIBOSOMAL 23S RNA, 5S ribosomal RNA, 50S ribosomal protein L2, ...
Authors:Belousoff, M.J., Shapira, T., Bashan, A., Zimmerman, E., Arakawa, K., Kinashi, H., Rozenberg, H., Yonath, A.
Deposit date:2010-11-07
Release date:2011-02-23
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (3.2473 Å)
Cite:Crystal structure of the synergistic antibiotic pair, lankamycin and lankacidin, in complex with the large ribosomal subunit.
Proc.Natl.Acad.Sci.USA, 108, 2011
3PIP
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CRYSTAL STRUCTURE OF THE SYNERGISTIC ANTIBIOTIC PAIR LANKAMYCIN AND LANKACIDIN IN COMPLEX WITH THE LARGE RIBOSOMAL SUBUNIT
Descriptor:RIBOSOMAL 23S RNA, 5S ribosomal RNA, 50S ribosomal protein L2, ...
Authors:Belousoff, M.J., Shapira, T., Bashan, A., Zimmerman, E., Kinashi, H., Rozenberg, H., Yonath, A.
Deposit date:2010-11-07
Release date:2011-02-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Crystal structure of the synergistic antibiotic pair, lankamycin and lankacidin, in complex with the large ribosomal subunit.
Proc.Natl.Acad.Sci.USA, 108, 2011
4U67
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CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT (50S) OF DEINOCOCCUS RADIODURANS CONTAINING A THREE RESIDUE INSERTION IN L22
Descriptor:50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, ...
Authors:Wekselman, I., Zimmerman, E., Rozenberg, H., Bashan, A., Yonath, A.
Deposit date:2014-07-28
Release date:2015-08-05
Last modified:2017-08-16
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:The Ribosomal Protein uL22 Modulates the Shape of the Protein Exit Tunnel.
Structure, 25, 2017
4WFN
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CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT (50S) OF DEINOCOCCUS RADIODURANS CONTAINING A THREE RESIDUE INSERTION IN L22 IN COMPLEX WITH ERYTHROMYCIN
Descriptor:50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, ...
Authors:Wekselman, I., Zimmerman, E., Rozenberg, H., Bashan, A., Yonath, A.
Deposit date:2014-09-16
Release date:2015-12-23
Last modified:2017-08-16
Method:X-RAY DIFFRACTION (3.54 Å)
Cite:The Ribosomal Protein uL22 Modulates the Shape of the Protein Exit Tunnel.
Structure, 25, 2017
6ZJ3
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CRYO-EM STRUCTURE OF THE HIGHLY ATYPICAL CYTOPLASMIC RIBOSOME OF EUGLENA GRACILIS
Descriptor:18S rRNA, A-tRNA, P-tRNA, ...
Authors:Matzov, D., Halfon, H., Zimmerman, E., Rozenberg, H., Bashan, A., Gray, M.W., Yonath, A.E., Shalev-Benami, M.
Deposit date:2020-06-27
Release date:2020-10-07
Last modified:2020-11-25
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis.
Nucleic Acids Res., 48, 2020
1ILC
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DNA BENDING BY AN ADENINE-THYMINE TRACT AND ITS ROLE IN GENE REGULATION.
Descriptor:5'-D(*AP*CP*CP*GP*AP*AP*TP*TP*CP*GP*GP*T)-3'
Authors:Hizver, J., Rozenberg, H., Frolow, F., Rabinovich, D., Shakked, Z.
Deposit date:2001-05-08
Release date:2002-05-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:DNA bending by an adenine--thymine tract and its role in gene regulation.
Proc.Natl.Acad.Sci.USA, 98, 2001
1XJX
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THE CRYSTAL STRUCTURES OF THE DNA BINDING SITES OF THE RUNX1 TRANSCRIPTION FACTOR
Descriptor:5'-D(*TP*CP*TP*GP*CP*GP*GP*TP*C)-3', 5'-D(*TP*GP*AP*CP*CP*GP*CP*AP*G)-3'
Authors:Kitayner, M., Rozenberg, H., Rabinovich, D., Shakked, Z.
Deposit date:2004-09-26
Release date:2005-03-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of the DNA-binding site of Runt-domain transcription regulators.
Acta Crystallogr.,Sect.D, 61, 2005
1XJY
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THE CRYSTAL STRUCTURES OF THE DNA BINDING SITES OF THE RUNX1 TRANSCRIPTION FACTOR
Descriptor:5'-D(*TP*CP*TP*GP*CP*GP*GP*TP*C)-3', 5'-D(*TP*GP*AP*CP*CP*GP*CP*AP*G)-3'
Authors:Kitayner, M., Rozenberg, H., Rabinovich, D., Shakked, Z.
Deposit date:2004-09-26
Release date:2005-03-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of the DNA-binding site of Runt-domain transcription regulators.
Acta Crystallogr.,Sect.D, 61, 2005
2AC0
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STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS (COMPLEX I)
Descriptor:5'-D(*CP*GP*GP*GP*CP*AP*TP*GP*CP*CP*CP*G)-3', Cellular tumor antigen p53, ZINC ION
Authors:Kitayner, M., Rozenberg, H., Kessler, N., Rabinovich, D., Shakked, Z.
Deposit date:2005-07-18
Release date:2006-07-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis of DNA Recognition by p53 Tetramers
Mol.Cell, 22, 2006
2ADY
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STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS (COMPLEX IV)
Descriptor:5'-D(*CP*GP*GP*AP*CP*AP*TP*GP*TP*CP*CP*G)-3', Cellular tumor antigen p53, ZINC ION
Authors:Kitayner, M., Rozenberg, H., Kessler, N., Rabinovich, D., Shakked, Z.
Deposit date:2005-07-21
Release date:2006-07-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis of DNA Recognition by p53 Tetramers
Mol.Cell, 22, 2006
2AHI
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STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS (COMPLEX III)
Descriptor:5'-D(*CP*GP*GP*AP*CP*AP*TP*GP*TP*CP*CP*G)-3', Cellular tumor antigen p53, ZINC ION
Authors:Kitayner, M., Rozenberg, H., Kessler, N., Rabinovich, D., Shakked, Z.
Deposit date:2005-07-28
Release date:2006-07-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Basis of DNA Recognition by p53 Tetramers
Mol.Cell, 22, 2006
2ATA
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STRUCTURAL BASIS OF DNA RECOGNITION BY P53 TETRAMERS (COMPLEX II)
Descriptor:5'-D(*AP*AP*GP*GP*CP*AP*TP*GP*CP*CP*TP*T)-3', Cellular tumor antigen p53, ZINC ION
Authors:Kitayner, M., Rozenberg, H., Kessler, N., Rabinovich, D., Shakked, Z.
Deposit date:2005-08-24
Release date:2006-07-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis of DNA Recognition by p53 Tetramers
Mol.Cell, 22, 2006
<123>
171916
PDB entries from 2020-12-02