Author results

3KFB
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CRYSTAL STRUCTURE OF A GROUP II CHAPERONIN FROM METHANOCOCCUS MARIPALUDIS
Descriptor:Chaperonin, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, MAGNESIUM ION
Authors:Pereira, J.H., Ralston, C.Y., Douglas, N., Meyer, D., Knee, K.M., Goulet, D.R., King, J.A., Frydman, J., Adams, P.D.
Deposit date:2009-10-27
Release date:2010-06-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structures of a group II chaperonin reveal the open and closed states associated with the protein folding cycle.
J.Biol.Chem., 285, 2010
3KFE
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CRYSTAL STRUCTURES OF A GROUP II CHAPERONIN FROM METHANOCOCCUS MARIPALUDIS
Descriptor:Chaperonin, MAGNESIUM ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Pereira, J.H., Ralston, C.Y., Douglas, N., Meyer, D., Knee, K.M., Goulet, D.R., King, J.A., Frydman, J., Adams, P.D.
Deposit date:2009-10-27
Release date:2010-06-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structures of a group II chaperonin reveal the open and closed states associated with the protein folding cycle.
J.Biol.Chem., 285, 2010
3KFK
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CRYSTAL STRUCTURES OF A GROUP II CHAPERONIN FROM METHANOCOCCUS MARIPALUDIS
Descriptor:Chaperonin, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Pereira, J.H., Ralston, C.Y., Douglas, N., Meyer, D., Knee, K.M., Goulet, D.R., King, J.A., Frydman, J., Adams, P.D.
Deposit date:2009-10-27
Release date:2010-06-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (6.003 Å)
Cite:Crystal structures of a group II chaperonin reveal the open and closed states associated with the protein folding cycle.
J.Biol.Chem., 285, 2010
3OF1
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CRYSTAL STRUCTURE OF BCY1, THE YEAST REGULATORY SUBUNIT OF PKA
Descriptor:cAMP-dependent protein kinase regulatory subunit, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
Authors:Rinaldi, J., Wu, J., Yang, J., Ralston, C.Y., Sankaran, B., Moreno, S., Taylor, S.S.
Deposit date:2010-08-13
Release date:2010-12-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structure of Yeast Regulatory Subunit: A Glimpse into the Evolution of PKA Signaling.
Structure, 18, 2010
3RUQ
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CRYSTAL STRUCTURE OF CPN-WT IN COMPLEX WITH ADP FROM METHANOCOCCUS MARIPALUDIS
Descriptor:Chaperonin, MAGNESIUM ION, ADENOSINE-5'-DIPHOSPHATE
Authors:Pereira, J.H., Ralston, C.Y., Douglas, N.R., Kumar, R., McAndrew, R.P., Knee, K.M., Frydman, J., Adams, P.D.
Deposit date:2011-05-05
Release date:2012-01-04
Last modified:2012-02-15
Method:X-RAY DIFFRACTION (2.798 Å)
Cite:Mechanism of nucleotide sensing in group II chaperonins.
Embo J., 31, 2012
3RUS
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CRYSTAL STRUCTURE OF CPN-RLS IN COMPLEX WITH ADP FROM METHANOCOCCUS MARIPALUDIS
Descriptor:Chaperonin, MAGNESIUM ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Pereira, J.H., Ralston, C.Y., Douglas, N.R., Kumar, R., McAndrew, R.P., Knee, K.M., King, J.A., Frydman, J., Adams, P.D.
Deposit date:2011-05-05
Release date:2012-01-04
Last modified:2012-02-15
Method:X-RAY DIFFRACTION (2.338 Å)
Cite:Mechanism of nucleotide sensing in group II chaperonins.
Embo J., 31, 2012
3RUV
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CRYSTAL STRUCTURE OF CPN-RLS IN COMPLEX WITH ATP ANALOGUE FROM METHANOCOCCUS MARIPALUDIS
Descriptor:Chaperonin, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Pereira, J.H., Ralston, C.Y., Douglas, N.R., Kumar, R., McAndrew, R.P., Knee, K.M., King, J.A., Frydman, J., Adams, P.D.
Deposit date:2011-05-05
Release date:2012-01-04
Last modified:2012-02-15
Method:X-RAY DIFFRACTION (2.242 Å)
Cite:Mechanism of nucleotide sensing in group II chaperonins.
Embo J., 31, 2012
3RUW
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CRYSTAL STRUCTURE OF CPN-RLS IN COMPLEX WITH ADP-ALFX FROM METHANOCOCCUS MARIPALUDIS
Descriptor:Chaperonin, MAGNESIUM ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Pereira, J.H., Ralston, C.Y., Douglas, N.R., Kumar, R., McAndrew, R.P., Knee, K.M., King, J.A., Frydman, J., Adams, P.D.
Deposit date:2011-05-05
Release date:2012-01-04
Last modified:2012-02-15
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Mechanism of nucleotide sensing in group II chaperonins.
Embo J., 31, 2012
4ZFX
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SIDEROCALIN-MEDIATED RECOGNITION AND CELLULAR UPTAKE OF ACTINIDES
Descriptor:Neutrophil gelatinase-associated lipocalin, THORIUM ION, N,N',N''-[(3S,7S,11S)-2,6,10-trioxo-1,5,9-trioxacyclododecane-3,7,11-triyl]tris(2,3-dihydroxybenzamide), ...
Authors:Allred, B.E., Rupert, P.B., Gauny, S.S., An, D.D., Ralston, C.Y., Sturzbecher-Hoehne, M., Strong, R.K., Abergel, R.J.
Deposit date:2015-04-22
Release date:2015-08-05
Last modified:2015-09-02
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Siderocalin-mediated recognition, sensitization, and cellular uptake of actinides.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZHC
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SIDEROCALIN-MEDIATED RECOGNITION AND CELLULAR UPTAKE OF ACTINIDES
Descriptor:Neutrophil gelatinase-associated lipocalin, THORIUM ION, N-{2-[bis(2-{[(2,3-dihydroxyphenyl)carbonyl]amino}ethyl)amino]ethyl}-1-hydroxy-6-oxo-1,6-dihydropyridine-2-carboxamide, ...
Authors:Allred, B.E., Rupert, P.B., Gauny, S.S., An, D.D., Ralston, C.Y., Sturzbecher-Hoehne, M., Strong, R.K., Abergel, R.J.
Deposit date:2015-04-24
Release date:2015-08-05
Last modified:2015-09-02
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Siderocalin-mediated recognition, sensitization, and cellular uptake of actinides.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZHD
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SIDEROCALIN-MEDIATED RECOGNITION AND CELLULAR UPTAKE OF ACTINIDES
Descriptor:Neutrophil gelatinase-associated lipocalin, PLUTONIUM ION, methyl N-(2,3-dihydroxybenzoyl)-O-formyl-L-serinate, ...
Authors:Allred, B.E., Rupert, P.B., Gauny, S.S., An, D.D., Ralston, C.Y., Sturzbecher-Hoehne, M., Strong, R.K., Abergel, R.J.
Deposit date:2015-04-24
Release date:2015-08-05
Last modified:2015-09-02
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Siderocalin-mediated recognition, sensitization, and cellular uptake of actinides.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZHF
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SIDEROCALIN-MEDIATED RECOGNITION AND CELLULAR UPTAKE OF ACTINIDES
Descriptor:Neutrophil gelatinase-associated lipocalin, CURIUM ION, N,N'-butane-1,4-diylbis[1-hydroxy-N-(3-{[(1-hydroxy-6-oxo-1,6-dihydropyridin-2-yl)carbonyl]amino}propyl)-6-oxo-1,6-dihydropyridine-2-carboxamide], ...
Authors:Allred, B.E., Rupert, P.B., Gauny, S.S., An, D.D., Ralston, C.Y., Sturzbecher-Hoehne, M., Strong, R.K., Abergel, R.J.
Deposit date:2015-04-24
Release date:2015-08-05
Last modified:2015-09-02
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Siderocalin-mediated recognition, sensitization, and cellular uptake of actinides.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZHG
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SIDEROCALIN-MEDIATED RECOGNITION AND CELLULAR UPTAKE OF ACTINIDES
Descriptor:Neutrophil gelatinase-associated lipocalin, AMERICIUM ION, N,N'-butane-1,4-diylbis[1-hydroxy-N-(3-{[(1-hydroxy-6-oxo-1,6-dihydropyridin-2-yl)carbonyl]amino}propyl)-6-oxo-1,6-dihydropyridine-2-carboxamide], ...
Authors:Allred, B.E., Rupert, P.B., Gauny, S.S., An, D.D., Ralston, C.Y., Sturzbecher-Hoehne, M., Strong, R.K., Abergel, R.J.
Deposit date:2015-04-24
Release date:2015-08-05
Last modified:2015-09-02
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Siderocalin-mediated recognition, sensitization, and cellular uptake of actinides.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZHH
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SIDEROCALIN-MEDIATED RECOGNITION AND CELLULAR UPTAKE OF ACTINIDES
Descriptor:Neutrophil gelatinase-associated lipocalin, SAMARIUM (III) ION, N,N'-butane-1,4-diylbis[1-hydroxy-N-(3-{[(1-hydroxy-6-oxo-1,6-dihydropyridin-2-yl)carbonyl]amino}propyl)-6-oxo-1,6-dihydropyridine-2-carboxamide], ...
Authors:Allred, B.E., Rupert, P.B., Gauny, S.S., An, D.D., Ralston, C.Y., Sturzbecher-Hoehne, M., Strong, R.K., Abergel, R.J.
Deposit date:2015-04-24
Release date:2015-08-05
Last modified:2015-09-02
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Siderocalin-mediated recognition, sensitization, and cellular uptake of actinides.
Proc.Natl.Acad.Sci.USA, 112, 2015
5UYX
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STRUCTURE OF HUMAN T-COMPLEX PROTEIN 1 SUBUNIT EPSILON (CCT5)
Descriptor:T-complex protein 1 subunit epsilon, ADENOSINE-5'-DIPHOSPHATE
Authors:Pereira, J.H., McAndrew, R.P., Sergeeva, O.A., Ralston, C.Y., King, J.A., Adams, P.D.
Deposit date:2017-02-24
Release date:2017-07-05
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of the human TRiC/CCT Subunit 5 associated with hereditary sensory neuropathy.
Sci Rep, 7, 2017
5UYZ
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STRUCTURE OF HUMAN T-COMPLEX PROTEIN 1 SUBUNIT EPSILON (CCT5) MUTANT HIS147ARG
Descriptor:T-complex protein 1 subunit epsilon, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Pereira, J.H., McAndrew, R.P., Sergeeva, O.A., Ralston, C.Y., King, J.A., Adams, P.D.
Deposit date:2017-02-24
Release date:2017-07-05
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure of the human TRiC/CCT Subunit 5 associated with hereditary sensory neuropathy.
Sci Rep, 7, 2017
5W74
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CRYSTAL STRUCTURE OF THE GROUP II CHAPERONIN FROM METHANOCOCCUS MARIPALUDIS D386ADELTALID MUTANT IN THE OPEN, ADP-BOUND STATE
Descriptor:Chaperonin, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Dalton, K.M., Lopez, T., Liu, C., Ralston, C.Y., Pereira, J.H., Chartron, J.W., McAndrew, R.P., Douglas, N.R., Adams, P.D., Pande, V.S., Frydman, J.
Deposit date:2017-06-19
Release date:2018-06-20
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:The Conformational Cycle of the Group II Chaperonin Termini
To Be Published
5W79
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CRYSTAL STRUCTURE OF THE GROUP II CHAPERONIN FROM METHANOCOCCUS MARIPALUDIS, CYSTEINE-LESS MUTANT IN THE APO STATE
Descriptor:Chaperonin, SULFATE ION
Authors:Dalton, K.M., Lopez, T., Liu, C., Ralston, C.Y., Pereira, J.H., Chartron, J.W., McAndrew, R.P., Douglas, N.R., Adams, P.D., Pande, V.S., Frydman, J.
Deposit date:2017-06-19
Release date:2018-06-20
Last modified:2018-08-29
Method:X-RAY DIFFRACTION (3.122 Å)
Cite:The Conformational Cycle of the Group II Chaperonin Termini
To Be Published
7KKJ
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STRUCTURE OF ANTI-SARS-COV-2 SPIKE NANOBODY MNB6
Descriptor:Synthetic nanobody mNb6, SULFATE ION, CHLORIDE ION
Authors:Schoof, M.S., Faust, B.F., Saunders, R.A., Sangwan, S., Rezelj, V., Hoppe, N., Boone, M., Billesboelle, C.B., Puchades, C., Azumaya, C.M., Kratochvil, H.T., Zimanyi, M., Desphande, I., Liang, J., Dickinson, S., Nguyen, H.C., Chio, C.M., Merz, G.E., Thompson, M.C., Diwanji, D., Schaefer, K., Anand, A.A., Dobzinski, N., Zha, B.S., Simoneau, C.R., Leon, K., White, K.M., Chio, U.S., Gupta, M., Jin, M., Li, F., Liu, Y., Zhang, K., Bulkley, D., Sun, M., Smith, A.M., Rizo, A.N., Moss, F., Brilot, A.F., Pourmal, S., Trenker, R., Pospiech, T., Gupta, S., Barsi-Rhyne, B., Belyy, V., Barile-Hill, A.W., Nock, S., Liu, Y., Krogan, N.J., Ralston, C.Y., Swaney, D.L., Garcia-Sastre, A., Ott, M., Vignuzzi, M., Walter, P., Manglik, A., QCRG Structural Biology Consortium
Deposit date:2020-10-27
Release date:2020-11-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:An ultrapotent synthetic nanobody neutralizes SARS-CoV-2 by stabilizing inactive Spike.
Science, 2020
7KKK
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SARS-COV-2 SPIKE IN COMPLEX WITH NEUTRALIZING NANOBODY NB6
Descriptor:SARS-CoV-2 spike glycoprotein, Synthetic nanobody Nb6, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Schoof, M.S., Faust, B.F., Saunders, R.A., Sangwan, S., Rezelj, V., Hoppe, N., Boone, M., Billesboelle, C.B., Puchades, C., Azumaya, C.M., Kratochvil, H.T., Zimanyi, M., Desphande, I., Liang, J., Dickinson, S., Nguyen, H.C., Chio, C.M., Merz, G.E., Thompson, M.C., Diwanji, D., Schaefer, K., Anand, A.A., Dobzinski, N., Zha, B.S., Simoneau, C.R., Leon, K., White, K.M., Chio, U.S., Gupta, M., Jin, M., Li, F., Liu, Y., Zhang, K., Bulkley, D., Sun, M., Smith, A.M., Rizo, A.N., Moss, F., Brilot, A.F., Pourmal, S., Trenker, R., Pospiech, T., Gupta, S., Barsi-Rhyne, B., Belyy, V., Barile-Hill, A.W., Nock, S., Liu, Y., Krogan, N.J., Ralston, C.Y., Swaney, D.L., Garcia-Sastre, A., Ott, M., Vignuzzi, M., Walter, P., Manglik, A., QCRG Structural Biology Consortium
Deposit date:2020-10-27
Release date:2020-11-11
Last modified:2020-11-25
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:An ultrapotent synthetic nanobody neutralizes SARS-CoV-2 by stabilizing inactive Spike.
Science, 2020
7KKL
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SARS-COV-2 SPIKE IN COMPLEX WITH NEUTRALIZING NANOBODY MNB6
Descriptor:SARS-CoV-2 spike glycoprotein, Synthetic nanobody mNb6, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Schoof, M.S., Faust, B.F., Saunders, R.A., Sangwan, S., Rezelj, V., Hoppe, N., Boone, M., Billesboelle, C.B., Puchades, C., Azumaya, C.M., Kratochvil, H.T., Zimanyi, M., Desphande, I., Liang, J., Dickinson, S., Nguyen, H.C., Chio, C.M., Merz, G.E., Thompson, M.C., Diwanji, D., Schaefer, K., Anand, A.A., Dobzinski, N., Zha, B.S., Simoneau, C.R., Leon, K., White, K.M., Chio, U.S., Gupta, M., Jin, M., Li, F., Liu, Y., Zhang, K., Bulkley, D., Sun, M., Smith, A.M., Rizo, A.N., Moss, F., Brilot, A.F., Pourmal, S., Trenker, R., Pospiech, T., Gupta, S., Barsi-Rhyne, B., Belyy, V., Barile-Hill, A.W., Nock, S., Liu, Y., Krogan, N.J., Ralston, C.Y., Swaney, D.L., Garcia-Sastre, A., Ott, M., Vignuzzi, M., Walter, P., Manglik, A., QCRG Structural Biology Consortium
Deposit date:2020-10-27
Release date:2020-11-11
Last modified:2020-11-25
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:An ultrapotent synthetic nanobody neutralizes SARS-CoV-2 by stabilizing inactive Spike.
Science, 2020
3NJ2
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CRYSTAL STRUCTURE OF CCE_0566 FROM THE CYANOBACTERIUM CYANOTHECE 51142, A PROTEIN ASSOCIATED WITH NITROGEN FIXATION FROM THE DUF269 FAMILY
Descriptor:DUF269-containing protein
Authors:Robinson, H., Ralston, C.Y., Addlagatta, A., Buchko, G.W.
Deposit date:2010-06-16
Release date:2010-07-07
Last modified:2012-02-29
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Crystal structure of cce_0566 from Cyanothece 51142, a protein associated with nitrogen fixation in the DUF269 family.
Febs Lett., 586, 2012
3UE5
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ECP-CLEAVED ACTIN IN COMPLEX WITH SPIR DOMAIN D
Descriptor:Actin, alpha skeletal muscle, Protein spire, ...
Authors:Chen, C., Phillips, M., Sawaya, M.R., Ralston, C.Y., Quinlan, M.E.
Deposit date:2011-10-28
Release date:2012-02-15
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Multiple Forms of Spire-Actin Complexes and their Functional Consequences.
J.Biol.Chem., 287, 2012
5KHP
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TIGHTENING THE RECOGNITION OF TETRAVALENT ZR AND TH COMPLEXES BY THE SIDEROPHORE-BINDING MAMMALIAN PROTEIN SIDEROCALIN FOR THERANOSTIC APPLICATIONS
Descriptor:Neutrophil gelatinase-associated lipocalin, ZIRCONIUM ION, N,N'-(butane-1,4-diyl)bis(N-{3-[(2,3-dihydroxybenzene-1-carbonyl)amino]propyl}-2,3-dihydroxybenzamide), ...
Authors:Rupert, P.B., Strong, R.K.
Deposit date:2016-06-15
Release date:2017-04-26
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Engineered Recognition of Tetravalent Zirconium and Thorium by Chelator-Protein Systems: Toward Flexible Radiotherapy and Imaging Platforms.
Inorg Chem, 55, 2016
5KIC
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LONG-SOUGHT STABILIZATION OF BERKELIUM(IV) IN SOLUTION: AN ANOMALY WITHIN THE HEAVY ACTINIDE SERIES
Descriptor:Neutrophil gelatinase-associated lipocalin, CALIFORNIUM ION, N,N'-butane-1,4-diylbis[1-hydroxy-N-(3-{[(1-hydroxy-6-oxo-1,6-dihydropyridin-2-yl)carbonyl]amino}propyl)-6-oxo-1,6-dihydropyridine-2-carboxamide], ...
Authors:Rupert, P.B., Strong, R.K.
Deposit date:2016-06-16
Release date:2017-04-26
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Chelation and stabilization of berkelium in oxidation state +IV.
Nat Chem, 9, 2017
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171588
PDB entries from 2020-11-25