Author results

3GPY
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SEQUENCE-MATCHED MUTM LESION RECOGNITION COMPLEX 3 (LRC3)
Descriptor:DNA glycosylase, DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*T*GP*CP*GP*TP*CP*CP*(8OG)P*GP*AP*TP*CP*TP*AP*CP*C)-3'), ...
Authors:Qi, Y., Verdine, G.L.
Deposit date:2009-03-23
Release date:2009-11-10
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme.
Nature, 462, 2009
3GQ5
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SEQUENCE-MATCHED MUTM INTERROGATION COMPLEX 5 (IC5)
Descriptor:DNA glycosylase, DNA (5'-D(*A*GP*GP*TP*AP*GP*AP*CP*CP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*T*CP*CP*GP*GP*GP*TP*CP*TP*AP*CP*C)-3'), ...
Authors:Qi, Y., Verdine, G.L.
Deposit date:2009-03-23
Release date:2009-11-10
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme.
Nature, 462, 2009
3JR4
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MUTM INTERROGATING AN EXTRAHELICAL G
Descriptor:DNA glycosylase, DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*G*CP*GP*TP*CP*CP*AP*(GX1)P*GP*TP*CP*TP*AP*CP*C)-3'), ...
Authors:Qi, Y., Spong, M.C., Verdine, G.L.
Deposit date:2009-09-08
Release date:2009-11-03
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Entrapment and structure of an extrahelical guanine attempting to enter the active site of a bacterial DNA glycosylase, MutM.
J.Biol.Chem., 285, 2010
3JR5
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MUTM LESION RECOGNITION CONTROL COMPLEX WITH N174C CROSSLINKING SITE
Descriptor:DNA glycosylase, DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*TP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*(OGX)P*AP*GP*TP*CP*TP*AP*CP*C)-3'), ...
Authors:Qi, Y., Spong, M.C., Verdine, G.L.
Deposit date:2009-09-08
Release date:2009-11-03
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.704 Å)
Cite:Entrapment and structure of an extrahelical guanine attempting to enter the active site of a bacterial DNA glycosylase, MutM.
J.Biol.Chem., 285, 2010
3SAS
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MUTM SLANTED COMPLEX 4 WITH R112A MUTATION
Descriptor:DNA GLYCOSYLASE, 5'-D(*A*GP*GP*TP*AP*GP*AP*CP*TP*CP*GP*GP*AP*CP*GP*C)-3', 5'-D(*T*GP*CP*GP*TP*CP*CP*GP*AP*GP*(TX2) P*CP*TP*AP*CP*C)-3', ...
Authors:Qi, Y., Verdine, G.L.
Deposit date:2011-06-03
Release date:2012-01-11
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Strandwise translocation of a DNA glycosylase on undamaged DNA.
Proc.Natl.Acad.Sci.USA, 109, 2012
3SAT
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MUTM SLANTED COMPLEX 6 WITH R112A MUTATION
Descriptor:DNA GLYCOSYLASE, 5'-D(*AP*GP*G*TP*AP*GP*AP*CP*CP*AP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*CP*GP*T*CP*CP*TP*GP*GP*(TX2) P*CP*TP*AP*CP*C)-3', ...
Authors:Qi, Y., Verdine, G.L.
Deposit date:2011-06-03
Release date:2012-01-11
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Strandwise translocation of a DNA glycosylase on undamaged DNA.
Proc.Natl.Acad.Sci.USA, 109, 2012
3SAW
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MUTM SLANTED COMPLEX 8 WITH R112A MUTATION
Descriptor:DNA GLYCOSYLASE, 5'-D(*A*GP*GP*TP*AP*GP*AP*CP*AP*AP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*CP*GP*TP*C*CP*TP*TP*GP*TP*(CX2)P*TP*AP*CP*C)-3', ...
Authors:Qi, Y., Verdine, G.L.
Deposit date:2011-06-03
Release date:2012-01-11
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Strandwise translocation of a DNA glycosylase on undamaged DNA.
Proc.Natl.Acad.Sci.USA, 109, 2012
5GNS
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STRUCTURES OF HUMAN MITOFUSIN 1 PROVIDE INSIGHT INTO MITOCHONDRIAL TETHERING
Descriptor:Mitofusin-1, GUANOSINE-5'-TRIPHOSPHATE
Authors:Qi, Y., Yan, L., Yu, C., Guo, X., Zhou, X., Hu, X., Huang, X., Rao, Z., Lou, Z., Hu, J.
Deposit date:2016-07-24
Release date:2016-12-07
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Structures of human Mitofusin 1 provide insight into mitochondrial tethering
To Be Published
3GO8
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MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC3-LOOP DELETION COMPLEX
Descriptor:Formamidopyrimidine-DNA glycosylase, 5'-D(P*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*CP*G)-3', 5'-D(*GP*CP*GP*TP*CP*CP*(8OG)P*GP*AP*TP*CP*TP*AP*C)-3', ...
Authors:Spong, M.C., Qi, Y., Verdine, G.L.
Deposit date:2009-03-18
Release date:2009-12-15
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme
Nature, 462, 2009
3GP1
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MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC3-V222P COMPLEX
Descriptor:DNA glycosylase, 5'-D(*AP*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*CP*GP*CP**C)-3', 5'-D(P*TP*GP*CP*GP*TP*CP*CP*(8OG)P*GP*AP*TP*CP*TP*AP*CP*C)-3', ...
Authors:Spong, M.C., Qi, Y., Verdine, G.L.
Deposit date:2009-03-20
Release date:2009-11-10
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme
Nature, 462, 2009
3GPP
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MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC3-T224P COMPLEX
Descriptor:DNA glycosylase, DNA (5'-D(P*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*C)-3'), DNA (5'-D(P*CP*GP*TP*CP*CP*(8OG)P*GP*AP*TP*CP*TP*AP*C)-3'), ...
Authors:Spong, M.C., Qi, Y., Verdine, G.L.
Deposit date:2009-03-23
Release date:2009-11-10
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme.
Nature, 462, 2009
3GPU
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MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC4-LOOP DELETION COMPLEX
Descriptor:DNA glycosylase, DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*TP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*(8OG)P*AP*GP*TP*CP*TP*AP*CP*C)-3'), ...
Authors:Banerjee, A., Qi, Y., Verdine, G.L.
Deposit date:2009-03-23
Release date:2009-11-10
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme.
Nature, 462, 2009
3GPX
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SEQUENCE-MATCHED MUTM INTERROGATION COMPLEX 4 (IC4)
Descriptor:DNA glycosylase, DNA (5'-D(*A*GP*GP*TP*AP*GP*AP*CP*TP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*GP*AP*GP*TP*CP*TP*AP*CP*C)-3'), ...
Authors:Spong, M.C., Qi, Y., Verdine, G.L.
Deposit date:2009-03-23
Release date:2009-11-10
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme.
Nature, 462, 2009
3GQ3
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MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC5-LOOP DELETION COMPLEX
Descriptor:DNA glycosylase, DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*GP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3'), ...
Authors:Banerjee, A., Qi, Y., Verdine, G.L.
Deposit date:2009-03-23
Release date:2009-11-10
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme.
Nature, 462, 2009
3GQ4
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SEQUENCE-MATCHED MUTM LESION RECOGNITION COMPLEX 5 (LRC5)
Descriptor:DNA glycosylase, DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*GP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3'), ...
Authors:Spong, M.C., Qi, Y., Verdine, G.L.
Deposit date:2009-03-23
Release date:2009-11-10
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme.
Nature, 462, 2009
3SAR
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MUTM SLANTED COMPLEX 1
Descriptor:Formamidopyrimidine-DNA glycosylase, 5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*AP*GP*GP*TP*(CX2) P*TP*AP*CP*C)-3', ...
Authors:Banerjee, A., Qi, Y., Spong, M.C., Verdine, G.L.
Deposit date:2011-06-03
Release date:2012-01-11
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Strandwise translocation of a DNA glycosylase on undamaged DNA.
Proc.Natl.Acad.Sci.USA, 109, 2012
3SAU
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MUTM INTERROGATION COMPLEX 6
Descriptor:DNA GLYCOSYLASE, 5'-D(*A*GP*GP*TP*AP*GP*AP*CP*CP*AP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*CP*GP*T*CP*CP*TP*GP*GP*(TX2) P*CP*TP*AP*CP*C)-3', ...
Authors:Spong, M.C., Qi, Y., Verdine, G.L.
Deposit date:2011-06-03
Release date:2012-01-11
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Strandwise translocation of a DNA glycosylase on undamaged DNA.
Proc.Natl.Acad.Sci.USA, 109, 2012
3SAV
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MUTM SLANTED COMPLEX 8
Descriptor:DNA GLYCOSYLASE, DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*AP*AP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*T*CP*CP*TP*TP*GP*TP*(CX2)P*TP*AP*CP*C)-3'), ...
Authors:Spong, M.C., Qi, Y., Verdine, G.L.
Deposit date:2011-06-03
Release date:2012-01-11
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.125 Å)
Cite:Strandwise translocation of a DNA glycosylase on undamaged DNA.
Proc.Natl.Acad.Sci.USA, 109, 2012
3J3R
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STRUCTURAL DYNAMICS OF THE MECA-CLPC COMPLEX REVEALED BY CRYO-EM
Descriptor:Adapter protein MecA 1, Negative regulator of genetic competence ClpC/MecB
Authors:Liu, J., Mei, Z., Li, N., Qi, Y., Xu, Y., Shi, Y., Wang, F., Lei, J., Gao, N.
Deposit date:2013-04-18
Release date:2013-05-15
Last modified:2014-10-22
Method:ELECTRON MICROSCOPY (9.4 Å)
Cite:Structural dynamics of the MecA-ClpC complex: a type II AAA+ protein unfolding machine
J.Biol.Chem., 288, 2013
3J3S
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STRUCTURAL DYNAMICS OF THE MECA-CLPC COMPLEX REVEALED BY CRYO-EM
Descriptor:Adapter protein MecA 1, Negative regulator of genetic competence ClpC/MecB
Authors:Liu, J., Mei, Z., Li, N., Qi, Y., Xu, Y., Shi, Y., Wang, F., Lei, J., Gao, N.
Deposit date:2013-04-18
Release date:2013-05-15
Last modified:2015-01-21
Method:ELECTRON MICROSCOPY (11 Å)
Cite:Structural dynamics of the MecA-ClpC complex: a type II AAA+ protein unfolding machine.
J.Biol.Chem., 288, 2013
3J3T
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STRUCTURAL DYNAMICS OF THE MECA-CLPC COMPLEX REVEALED BY CRYO-EM
Descriptor:Adapter protein MecA 1, Negative regulator of genetic competence ClpC/MecB
Authors:Liu, J., Mei, Z., Li, N., Qi, Y., Xu, Y., Shi, Y., Wang, F., Lei, J., Gao, N.
Deposit date:2013-04-18
Release date:2013-05-15
Last modified:2015-01-21
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Structural dynamics of the MecA-ClpC complex: a type II AAA+ protein unfolding machine.
J.Biol.Chem., 288, 2013
3J3U
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STRUCTURAL DYNAMICS OF THE MECA-CLPC COMPLEX REVEALED BY CRYO-EM
Descriptor:Adapter protein MecA 1, Negative regulator of genetic competence ClpC/MecB
Authors:Liu, J., Mei, Z., Li, N., Qi, Y., Xu, Y., Shi, Y., Wang, F., Lei, J., Gao, N.
Deposit date:2013-04-18
Release date:2013-05-15
Last modified:2015-01-21
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Structural dynamics of the MecA-ClpC complex: a type II AAA+ protein unfolding machine.
J.Biol.Chem., 288, 2013
3JTN
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CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF YPBH
Descriptor:Adapter protein mecA 2, IODIDE ION
Authors:Wang, F., Mei, Z., Qi, Y., Yan, C., Wang, J., Shi, Y.
Deposit date:2009-09-14
Release date:2009-09-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal Structure of the MecA degradation tag
To be Published
3JTO
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CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF YPBH
Descriptor:Adapter protein mecA 2
Authors:Wang, F., Mei, Z., Qi, Y., Yan, C., Wang, J., Shi, Y.
Deposit date:2009-09-14
Release date:2009-09-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of the MecA Degradation Tag
To be Published
3JTP
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CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF MECA
Descriptor:Adapter protein mecA 1, IODIDE ION
Authors:Wang, F., Mei, Z., Qi, Y., Yan, C., Wang, J., Shi, Y.
Deposit date:2009-09-14
Release date:2009-09-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:crystal structure of the MecA degradation tag
To be Published