Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3LQQ
DownloadVisualize
BU of 3lqq by Molmil
Structure of the CED-4 Apoptosome
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell death protein 4, MAGNESIUM ION
Authors:Qi, S, Pang, Y, Shi, Y, Yan, N, Liu, Q.
Deposit date:2010-02-09
Release date:2010-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.534 Å)
Cite:Crystal structure of the Caenorhabditis elegans apoptosome reveals an octameric assembly of CED-4.
Cell(Cambridge,Mass.), 141, 2010
3LQR
DownloadVisualize
BU of 3lqr by Molmil
Structure of CED-4:CED-3 complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell death protein 4, MAGNESIUM ION
Authors:Qi, S, Pang, Y, Shi, Y, Yan, N.
Deposit date:2010-02-09
Release date:2010-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.896 Å)
Cite:Crystal structure of the Caenorhabditis elegans apoptosome reveals an octameric assembly of CED-4.
Cell(Cambridge,Mass.), 141, 2010
5C50
DownloadVisualize
BU of 5c50 by Molmil
Crystal structure of the complex of human Atg101-Atg13 HORMA domain
Descriptor: Autophagy-related protein 101, Autophagy-related protein 13, BENZAMIDINE
Authors:Qi, S, Hurley, J.H.
Deposit date:2015-06-19
Release date:2015-10-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structure of the Human Atg13-Atg101 HORMA Heterodimer: an Interaction Hub within the ULK1 Complex.
Structure, 23, 2015
4R7X
DownloadVisualize
BU of 4r7x by Molmil
Crystal structure of N-lobe of human ARRDC3(1-180)
Descriptor: Arrestin domain-containing protein 3, PHOSPHATE ION
Authors:Qi, S, Hurley, J.
Deposit date:2014-08-28
Release date:2014-10-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Insights into beta 2-adrenergic receptor binding from structures of the N-terminal lobe of ARRDC3.
Protein Sci., 23, 2014
4R7V
DownloadVisualize
BU of 4r7v by Molmil
Crystal structure of N-lobe of human ARRDC3(1-165)
Descriptor: Arrestin domain-containing protein 3
Authors:Qi, S, Hurley, J.
Deposit date:2014-08-28
Release date:2014-10-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Insights into beta 2-adrenergic receptor binding from structures of the N-terminal lobe of ARRDC3.
Protein Sci., 23, 2014
5JW9
DownloadVisualize
BU of 5jw9 by Molmil
The Crystal Structure of ELL2 Oclludin Domain and AFF4 peptide
Descriptor: AF4/FMR2 family member 4, RNA polymerase II elongation factor ELL2
Authors:Qi, S, Hurley, J.H.
Deposit date:2016-05-11
Release date:2017-02-08
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Structural basis for ELL2 and AFF4 activation of HIV-1 proviral transcription.
Nat Commun, 8, 2017
4N7H
DownloadVisualize
BU of 4n7h by Molmil
Crystal Structure of the Complex of 3rd WW domain of Human Nedd4 and 1st PPXY Motif of ARRDC3
Descriptor: Arrestin domain-containing protein 3, E3 ubiquitin-protein ligase NEDD4, GUANIDINE
Authors:Qi, S, O'Hayre, M, Gutkind, J.S, Hurley, J.
Deposit date:2013-10-15
Release date:2014-01-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Structural and biochemical basis for ubiquitin ligase recruitment by arrestin-related domain-containing protein-3 (ARRDC3).
J.Biol.Chem., 289, 2014
4N7F
DownloadVisualize
BU of 4n7f by Molmil
Crystal structure of 3rd WW domain of human Nedd4-1
Descriptor: E3 ubiquitin-protein ligase NEDD4
Authors:Qi, S, O'Hayre, M, Gutkind, J.S, Hurley, J.
Deposit date:2013-10-15
Release date:2014-01-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.102 Å)
Cite:Structural and biochemical basis for ubiquitin ligase recruitment by arrestin-related domain-containing protein-3 (ARRDC3).
J.Biol.Chem., 289, 2014
6WKS
DownloadVisualize
BU of 6wks by Molmil
Structure of SARS-CoV-2 nsp16/nsp10 in complex with RNA cap analogue (m7GpppA) and S-adenosylmethionine
Descriptor: 1,2-ETHANEDIOL, 2'-O-methyltransferase, ADENOSINE, ...
Authors:Gupta, Y.K, Viswanathan, T, Arya, S, Qi, S, Misra, A, Chan, S.-H.
Deposit date:2020-04-16
Release date:2020-05-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of RNA cap modification by SARS-CoV-2.
Nat Commun, 11, 2020
7LW3
DownloadVisualize
BU of 7lw3 by Molmil
Structure of SARS-CoV-2 nsp16/nsp10 complex in presence of Cap-1 analog (m7GpppAmU) and SAH
Descriptor: 1,2-ETHANEDIOL, 2'-O-methyltransferase, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Gupta, Y.K, Viswanathan, T, Misra, A, Qi, S.
Deposit date:2021-02-27
Release date:2021-05-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A metal ion orients SARS-CoV-2 mRNA to ensure accurate 2'-O methylation of its first nucleotide.
Nat Commun, 12, 2021
7LW4
DownloadVisualize
BU of 7lw4 by Molmil
Structure of SARS-CoV-2 nsp16/nsp10 complex in presence of S-adenosyl-L-homocysteine (SAH)
Descriptor: 1,2-ETHANEDIOL, 2'-O-methyltransferase, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Gupta, Y.K, Viswanathan, T, Misra, A, Qi, S.
Deposit date:2021-02-27
Release date:2021-05-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A metal ion orients SARS-CoV-2 mRNA to ensure accurate 2'-O methylation of its first nucleotide.
Nat Commun, 12, 2021
6KYB
DownloadVisualize
BU of 6kyb by Molmil
Crystal structure of Atg18 from Saccharomyces cerevisiae
Descriptor: Autophagy-related protein 18
Authors:Tang, D, Lei, Y, Liao, G, Chen, Q, Xu, L, Lu, K, Qi, S.
Deposit date:2019-09-17
Release date:2020-09-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The crystal structure of Atg18 reveals a new binding site for Atg2 in Saccharomyces cerevisiae.
Cell.Mol.Life Sci., 78, 2021
6K7P
DownloadVisualize
BU of 6k7p by Molmil
Crystal structure of human AFF4-THD domain
Descriptor: AF4/FMR2 family member 4
Authors:Tang, D, Xue, Y, Li, S, Cheng, W, Duan, J, Wang, J, Qi, S.
Deposit date:2019-06-08
Release date:2020-03-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and functional insight into the effect of AFF4 dimerization on activation of HIV-1 proviral transcription.
Cell Discov, 6, 2020
6LT0
DownloadVisualize
BU of 6lt0 by Molmil
cryo-EM structure of C9ORF72-SMCR8-WDR41
Descriptor: Guanine nucleotide exchange C9orf72, Guanine nucleotide exchange protein SMCR8, WD repeat-containing protein 41
Authors:Tang, D, Sheng, J, Xu, L, Zhan, X, Yan, C, Qi, S.
Deposit date:2020-01-21
Release date:2020-04-15
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of C9ORF72-SMCR8-WDR41 reveals the role as a GAP for Rab8a and Rab11a.
Proc.Natl.Acad.Sci.USA, 117, 2020
8GSC
DownloadVisualize
BU of 8gsc by Molmil
Echovirus3 A-particle in complex with 6D10 Fab
Descriptor: Heavy chain of 6D10, Light chain of 6D10, VP1, ...
Authors:Wang, X, Fu, W.
Deposit date:2022-09-06
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural Basis for the Immunogenicity of the C-Terminus of VP1 of Echovirus 3 Revealed by the Binding of a Neutralizing Antibody.
Viruses, 14, 2022
8GSE
DownloadVisualize
BU of 8gse by Molmil
Echovirus3 capsid protein in complex with 6D10 Fab (upright)
Descriptor: Heavy chain of 6D10, Light chain of 6D10, VP0, ...
Authors:Wang, X, Fu, W.
Deposit date:2022-09-06
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural Basis for the Immunogenicity of the C-Terminus of VP1 of Echovirus 3 Revealed by the Binding of a Neutralizing Antibody.
Viruses, 14, 2022
8GSD
DownloadVisualize
BU of 8gsd by Molmil
Echovirus3 full particle in complex with 6D10 Fab
Descriptor: Genome polyprotein, Genome polyprotein (Fragment), Heavy chain of 6D10, ...
Authors:Wang, X, Fu, W.
Deposit date:2022-09-06
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural Basis for the Immunogenicity of the C-Terminus of VP1 of Echovirus 3 Revealed by the Binding of a Neutralizing Antibody.
Viruses, 14, 2022
8GSF
DownloadVisualize
BU of 8gsf by Molmil
Echovirus3 empty particle in complex with 6D10 Fab (sideling)
Descriptor: Heavy chain of 6D10, Light chain of 6D10, VP0, ...
Authors:Wang, X, Fu, W.
Deposit date:2022-09-06
Release date:2022-12-14
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural Basis for the Immunogenicity of the C-Terminus of VP1 of Echovirus 3 Revealed by the Binding of a Neutralizing Antibody.
Viruses, 14, 2022
5HU9
DownloadVisualize
BU of 5hu9 by Molmil
Crystal structure of ABL1 in complex with CHMFL-074
Descriptor: 1,2-ETHANEDIOL, 4-[(4-methylpiperazin-1-yl)methyl]-N-(4-methyl-3-{[1-(pyridin-3-ylcarbonyl)piperidin-4-yl]oxy}phenyl)-3-(trifluoromethyl)benzamide, CHLORIDE ION, ...
Authors:Kong, L.L, Yun, C.H.
Deposit date:2016-01-27
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.529 Å)
Cite:Discovery and characterization of a novel potent type II native and mutant BCR-ABL inhibitor (CHMFL-074) for Chronic Myeloid Leukemia (CML)
Oncotarget, 7, 2016
7FC0
DownloadVisualize
BU of 7fc0 by Molmil
Reconstitution of MbnABC complex from Rugamonas rubra ATCC-43154 (GroupIII)
Descriptor: FE (III) ION, Methanobactin biosynthesis cassette protein MbnB, Methanobactin biosynthesis cassette protein MbnC, ...
Authors:Chao, D, Zhaolin, L, Shoujie, L, Li, Z, Dan, Z, Ying, J, Wei, C.
Deposit date:2021-07-13
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.643 Å)
Cite:Crystal structure and catalytic mechanism of the MbnBC holoenzyme required for methanobactin biosynthesis.
Cell Res., 32, 2022
5GUF
DownloadVisualize
BU of 5guf by Molmil
Structural insight into an intramembrane enzyme for archaeal membrane lipids biosynthesis
Descriptor: CDP-archaeol synthase, CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Cheng, W, Ren, S.
Deposit date:2016-08-29
Release date:2017-10-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.397 Å)
Cite:Structural and mechanistic insights into the biosynthesis of CDP-archaeol in membranes.
Cell Res., 27, 2017
6OCG
DownloadVisualize
BU of 6ocg by Molmil
Crystal structure of VASH1-SVBP complex bound with EpoY
Descriptor: CHLORIDE ION, GLYCEROL, N-[(3R)-4-ethoxy-3-hydroxy-4-oxobutanoyl]-L-tyrosine, ...
Authors:Li, F, Luo, X, Yu, H.
Deposit date:2019-03-23
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.833 Å)
Cite:Structural basis of tubulin detyrosination by vasohibins.
Nat.Struct.Mol.Biol., 26, 2019
6OCF
DownloadVisualize
BU of 6ocf by Molmil
The crystal structure of VASH1-SVBP complex
Descriptor: CHLORIDE ION, GLYCEROL, Small vasohibin-binding protein, ...
Authors:Li, F, Luo, X, Yu, H.
Deposit date:2019-03-23
Release date:2019-06-26
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Structural basis of tubulin detyrosination by vasohibins.
Nat.Struct.Mol.Biol., 26, 2019
6OCH
DownloadVisualize
BU of 6och by Molmil
Crystal structure of VASH1-SVBP complex bound with parthenolide
Descriptor: GLYCEROL, SULFATE ION, Small vasohibin-binding protein, ...
Authors:Li, F, Luo, X, Yu, H.
Deposit date:2019-03-23
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Structural basis of tubulin detyrosination by vasohibins.
Nat.Struct.Mol.Biol., 26, 2019
4DT1
DownloadVisualize
BU of 4dt1 by Molmil
Crystal structure of the Psy3-Csm2 complex
Descriptor: Chromosome segregation in meiosis protein 2, ETHANOL, Platinum sensitivity protein 3
Authors:Tao, Y, Niu, L, Teng, M.
Deposit date:2012-02-20
Release date:2012-04-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Structural analysis of Shu proteins reveals a DNA binding role essential for resisting damage
J.Biol.Chem., 287, 2012

 

123>

218196

PDB entries from 2024-04-10

PDB statisticsPDBj update infoContact PDBjnumon