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2JL9
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BU of 2jl9 by Molmil
Structural explanation for the role of Mn in the activity of phi6 RNA- dependent RNA polymerase
Descriptor: RNA-DIRECTED RNA POLYMERASE
Authors:Poranen, M.M, Salgado, P.S, Koivunen, M.R.L, Wright, S, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2008-09-05
Release date:2008-11-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Explanation for the Role of Mn2+ in the Activity of {Phi}6 RNA-Dependent RNA Polymerase.
Nucleic Acids Res., 36, 2008
2JLF
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BU of 2jlf by Molmil
STRUCTURAL EXPLANATION FOR THE ROLE OF MN IN THE ACTIVITY OF PHI6 RNA- DEPENDENT RNA POLYMERASE
Descriptor: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
Authors:Poranen, M.M, Salgado, P.S, Koivunen, M.R.L, Wright, S, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2008-09-08
Release date:2008-11-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Explanation for the Role of Mn2+ in the Activity of {Phi}6 RNA-Dependent RNA Polymerase.
Nucleic Acids Res., 36, 2008
2JLG
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BU of 2jlg by Molmil
STRUCTURAL EXPLANATION FOR THE ROLE OF MN IN THE ACTIVITY OF PHI6 RNA-DEPENDENT RNA POLYMERASE
Descriptor: 5'-D(*DT DT DT DC DCP)-3', GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ...
Authors:Poranen, M.M, Salgado, P.S, Koivunen, M.R.L, Wright, S, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2008-09-09
Release date:2008-11-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Explanation for the Role of Mn2+ in the Activity of {Phi}6 RNA-Dependent RNA Polymerase.
Nucleic Acids Res., 36, 2008
5MUV
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BU of 5muv by Molmil
Atomic structure fitted into a localized reconstruction of bacteriophage phi6 packaging hexamer P4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, Packaging enzyme P4
Authors:Sun, Z, El Omari, K, Sun, X, Ilca, S, Kotecha, A, Stuart, D.I, Poranen, M.M, Huiskonen, J.T.
Deposit date:2017-01-14
Release date:2017-03-22
Last modified:2019-04-24
Method:ELECTRON MICROSCOPY (9.1 Å)
Cite:Double-stranded RNA virus outer shell assembly by bona fide domain-swapping.
Nat Commun, 8, 2017
5MUW
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BU of 5muw by Molmil
Atomic structure of P4 packaging enzyme fitted into a localized reconstruction of bacteriophage phi6 vertex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, Packaging enzyme P4
Authors:Sun, Z, El Omari, K, Sun, X, Ilca, S, Kotecha, A, Stuart, D.I, Poranen, M.M, Huiskonen, J.T.
Deposit date:2017-01-14
Release date:2017-03-22
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Double-stranded RNA virus outer shell assembly by bona fide domain-swapping.
Nat Commun, 8, 2017
5MUU
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BU of 5muu by Molmil
dsRNA bacteriophage phi6 nucleocapsid
Descriptor: Major inner protein P1, Major outer capsid protein, Packaging enzyme P4
Authors:Sun, Z, El Omari, K, Sun, X, Ilca, S.L, Kotecha, A, Stuart, D.I, Poranen, M.M, Huiskonen, J.T.
Deposit date:2017-01-14
Release date:2017-03-22
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Double-stranded RNA virus outer shell assembly by bona fide domain-swapping.
Nat Commun, 8, 2017
4A8M
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BU of 4a8m by Molmil
Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation
Descriptor: 5'-D(*AP*AP*TP*CP)-3', ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2011-11-21
Release date:2012-07-04
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation.
J.Virol., 86, 2012
4A8O
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BU of 4a8o by Molmil
Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation
Descriptor: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
Authors:Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2011-11-21
Release date:2012-07-04
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation.
J.Virol., 86, 2012
4A8S
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BU of 4a8s by Molmil
Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation
Descriptor: 5'-D(*TP*TP*TP*TP*CP*GP*CP*GP*TP*AP*GP*CP*GP)-3', ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2011-11-21
Release date:2012-07-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation.
J.Virol., 86, 2012
4A8K
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BU of 4a8k by Molmil
Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation
Descriptor: 5'-D(*AP*AP*TP*CP)-3', 5'-D(*TP*CP)-3', GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2011-11-21
Release date:2012-07-04
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation.
J.Virol., 86, 2012
4A8Q
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BU of 4a8q by Molmil
Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation
Descriptor: 5'-D(*DTP*TP*CP*GP*CP*GP)-3', ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2011-11-21
Release date:2012-07-04
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation.
J.Virol., 86, 2012
4A8W
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BU of 4a8w by Molmil
Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation
Descriptor: 5'-D(*TP*TP*CP*GP*CP*GP*TP*AP*AP*GP*CP*GP)-3', ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2011-11-21
Release date:2012-07-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation.
J.Virol., 86, 2012
4A8F
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BU of 4a8f by Molmil
Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation
Descriptor: 5'-D(*DAP*GP*CP*GP)-3', ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2011-11-21
Release date:2012-07-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation.
J.Virol., 86, 2012
4A8Y
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BU of 4a8y by Molmil
Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation
Descriptor: 5'-D(*TP*TP*TP*TP*CP*GP*CP*GP*TP*AP*AP*GP*CP*GP)-3', ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2011-11-21
Release date:2012-07-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation.
J.Virol., 86, 2012
4BLQ
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BU of 4blq by Molmil
P4 PROTEIN FROM BACTERIOPHAGE PHI8
Descriptor: P4
Authors:El Omari, K, Meier, C, Kainov, D, Sutton, G, Grimes, J.M, Poranen, M.M, Bamford, D.H, Tuma, R, Stuart, D.I, Mancini, E.J.
Deposit date:2013-05-04
Release date:2013-08-21
Last modified:2013-11-13
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Tracking in Atomic Detail the Functional Specializations in Viral Reca Helicases that Occur During Evolution.
Nucleic Acids Res., 41, 2013
4BLO
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BU of 4blo by Molmil
P4 PROTEIN FROM BACTERIOPHAGE PHI6 IN COMPLEX WITH ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, PACKAGING ENZYME P4
Authors:El Omari, K, Meier, C, Kainov, D, Sutton, G, Grimes, J.M, Poranen, M.M, Bamford, D.H, Tuma, R, Stuart, D.I, Mancini, E.J.
Deposit date:2013-05-04
Release date:2013-08-21
Last modified:2013-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Tracking in Atomic Detail the Functional Specializations in Viral Reca Helicases that Occur During Evolution.
Nucleic Acids Res., 41, 2013
4BLP
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BU of 4blp by Molmil
P4 PROTEIN FROM BACTERIOPHAGE PHI13
Descriptor: CITRATE ANION, GLYCEROL, PACKAGING ENZYME P4
Authors:El Omari, K, Meier, C, Kainov, D, Sutton, G, Grimes, J.M, Poranen, M.M, Bamford, D.H, Tuma, R, Stuart, D.I, Mancini, E.J.
Deposit date:2013-05-04
Release date:2013-08-21
Last modified:2013-11-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Tracking in Atomic Detail the Functional Specializations in Viral Reca Helicases that Occur During Evolution.
Nucleic Acids Res., 41, 2013
4B02
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BU of 4b02 by Molmil
The C-terminal Priming Domain is Strongly Associated with the Main Body of Bacteriophage phi6 RNA-Dependent RNA Polymerase
Descriptor: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
Authors:Sarin, L.P, Wright, S, Chen, Q, Degerth, L.H, Stuart, D.I, Grimes, J.M, Bamford, D.H, Poranen, M.M.
Deposit date:2012-06-27
Release date:2012-08-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The C-Terminal Priming Domain is Strongly Associated with the Main Body of Bacteriophage Phi6 RNA-Dependent RNA Polymerase.
Virology, 432, 2012
4BLT
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BU of 4blt by Molmil
P4 PROTEIN FROM BACTERIOPHAGE PHI12 S292A MUTANT IN COMPLEX WITH AMPcPP
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, NTPASE P4
Authors:El Omari, K, Meier, C, Kainov, D, Sutton, G, Grimes, J.M, Poranen, M.M, Bamford, D.H, Tuma, R, Stuart, D.I, Mancini, E.J.
Deposit date:2013-05-04
Release date:2013-08-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Tracking in Atomic Detail the Functional Specializations in Viral Reca Helicases that Occur During Evolution.
Nucleic Acids Res., 41, 2013
4BLS
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BU of 4bls by Molmil
P4 PROTEIN FROM BACTERIOPHAGE PHI12 Q278A MUTANT IN COMPLEX WITH AMPcPP
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, NTPASE P4
Authors:El Omari, K, Meier, C, Kainov, D, Sutton, G, Grimes, J.M, Poranen, M.M, Bamford, D.H, Tuma, R, Stuart, D.I, Mancini, E.J.
Deposit date:2013-05-04
Release date:2013-08-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Tracking in Atomic Detail the Functional Specializations in Viral Reca Helicases that Occur During Evolution.
Nucleic Acids Res., 41, 2013
4BLR
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BU of 4blr by Molmil
P4 PROTEIN FROM BACTERIOPHAGE PHI12 IN COMPLEX WITH UTP
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, NTPASE P4, URIDINE 5'-TRIPHOSPHATE
Authors:El Omari, K, Meier, C, Kainov, D, Sutton, G, Grimes, J.M, Poranen, M.M, Bamford, D.H, Tuma, R, Stuart, D.I, Mancini, E.J.
Deposit date:2013-05-04
Release date:2013-08-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tracking in Atomic Detail the Functional Specializations in Viral Reca Helicases that Occur During Evolution.
Nucleic Acids Res., 41, 2013
4BWY
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BU of 4bwy by Molmil
P4 PROTEIN FROM BACTERIOPHAGE PHI8 (R32)
Descriptor: P4
Authors:El Omari, K, Meier, C, Kainov, D, Sutton, G, Grimes, J.M, Poranen, M.M, Bamford, D.H, Tuma, R, Stuart, D.I, Mancini, E.J.
Deposit date:2013-07-05
Release date:2013-08-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Tracking in Atomic Detail the Functional Specializations in Viral Reca Helicases that Occur During Evolution.
Nucleic Acids Res., 41, 2013
5FJ6
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BU of 5fj6 by Molmil
Structure of the P2 polymerase inside in vitro assembled bacteriophage phi6 polymerase complex
Descriptor: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
Authors:Ilca, S, Kotecha, A, Sun, X, Poranen, M.P, Stuart, D.I, Huiskonen, J.T.
Deposit date:2015-10-06
Release date:2015-11-04
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (7.9 Å)
Cite:Localized Reconstruction of Subunits from Electron Cryomicroscopy Images of Macromolecular Complexes.
Nat.Commun., 6, 2015
5FJ7
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BU of 5fj7 by Molmil
Structure of the P2 polymerase inside in vitro assembled bacteriophage phi6 polymerase complex, with P1 included
Descriptor: MAJOR INNER PROTEIN P1, MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
Authors:Ilca, S, Kotecha, A, Sun, X, Poranen, M.P, Stuart, D.I, Huiskonen, J.T.
Deposit date:2015-10-06
Release date:2015-11-04
Last modified:2019-11-20
Method:ELECTRON MICROSCOPY (7.9 Å)
Cite:Localized Reconstruction of Subunits from Electron Cryomicroscopy Images of Macromolecular Complexes.
Nat.Commun., 6, 2015
5FJ5
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BU of 5fj5 by Molmil
Structure of the in vitro assembled bacteriophage phi6 polymerase complex
Descriptor: MAJOR INNER PROTEIN P1
Authors:Ilca, S, Kotecha, A, Sun, X, Poranen, M.P, Stuart, D.I, Huiskonen, J.T.
Deposit date:2015-10-06
Release date:2015-11-04
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Localized Reconstruction of Subunits from Electron Cryomicroscopy Images of Macromolecular Complexes.
Nat.Commun., 6, 2015

 

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