Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6XZC
DownloadVisualize
BU of 6xzc by Molmil
CryoEM structure of the ring-shaped virulence factor EspB from Mycobacterium tuberculosis
Descriptor: ESX-1 secretion-associated protein EspB
Authors:Piton, J, Pojer, F, Wakatsuki, S, Gati, C, Cole, S.T.
Deposit date:2020-02-03
Release date:2020-06-17
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:High resolution CryoEM structure of the ring-shaped virulence factor EspB fromMycobacterium tuberculosis.
J Struct Biol X, 4, 2020
6G83
DownloadVisualize
BU of 6g83 by Molmil
Crystal structure of M. tuberculosis DprE1 in complex with sPBTZ169 (sulfonylPBTZ)
Descriptor: Decaprenylphosphoryl-beta-D-ribose oxidase, FLAVIN-ADENINE DINUCLEOTIDE, [2-(4-cyclohexylsulfonylpiperazin-1-yl)-4-oxidanylidene-6-(trifluoromethyl)-1,3-benzothiazin-8-yl]-oxidanylidene-azanium
Authors:Piton, J, Makarov, V, Cole, S.T.
Deposit date:2018-04-07
Release date:2018-08-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-Based Drug Design and Characterization of Sulfonyl-Piperazine Benzothiazinone Inhibitors of DprE1 from Mycobacterium tuberculosis.
Antimicrob. Agents Chemother., 62, 2018
3M4I
DownloadVisualize
BU of 3m4i by Molmil
Crystal structure of the second part of the Mycobacterium tuberculosis DNA gyrase reaction core: the TOPRIM domain at 1.95 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA gyrase subunit B
Authors:Piton, J, Petrella, S, Aubry, A, Mayer, C.
Deposit date:2010-03-11
Release date:2010-09-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural insights into the quinolone resistance mechanism of Mycobacterium tuberculosis DNA gyrase.
Plos One, 5, 2010
3IG0
DownloadVisualize
BU of 3ig0 by Molmil
crystal structure of the second part of the Mycobacterium tuberculosis DNA gyrase reaction core: the TOPRIM domain at 2.1 A resolution
Descriptor: DNA gyrase subunit B
Authors:Piton, J, Aubry, A, Delarue, M, Mayer, C.
Deposit date:2009-07-27
Release date:2010-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into the quinolone resistance mechanism of Mycobacterium tuberculosis DNA gyrase.
Plos One, 5, 2010
3IFZ
DownloadVisualize
BU of 3ifz by Molmil
crystal structure of the first part of the Mycobacterium tuberculosis DNA gyrase reaction core: the breakage and reunion domain at 2.7 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA gyrase subunit A, SODIUM ION
Authors:Piton, J, Aubry, A, Delarue, M, Mayer, C.
Deposit date:2009-07-27
Release date:2010-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural insights into the quinolone resistance mechanism of Mycobacterium tuberculosis DNA gyrase.
Plos One, 5, 2010
4JZT
DownloadVisualize
BU of 4jzt by Molmil
Crystal structure of the Bacillus subtilis pyrophosphohydrolase BsRppH (E68A mutant) bound to GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, dGTP pyrophosphohydrolase
Authors:Piton, J, Larue, V, Thillier, Y, Dorleans, A, Pellegrini, O, Li de la Sierra-Gallay, I, Vasseur, J.J, Debart, F, Tisne, C, Condon, C.
Deposit date:2013-04-03
Release date:2013-05-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Bacillus subtilis RNA deprotection enzyme RppH recognizes guanosine in the second position of its substrates.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JZV
DownloadVisualize
BU of 4jzv by Molmil
Crystal structure of the Bacillus subtilis pyrophosphohydrolase BsRppH bound to a non-hydrolysable triphosphorylated dinucleotide RNA (pcp-pGpG) - second guanosine residue in guanosine binding pocket
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MAGNESIUM ION, RNA (5'-R(*(GCP)P*G)-3'), ...
Authors:Piton, J, Larue, V, Thillier, Y, Dorleans, A, Pellegrini, O, Li de la Sierra-Gallay, I, Vasseur, J.J, Debart, F, Tisne, C, Condon, C.
Deposit date:2013-04-03
Release date:2013-05-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Bacillus subtilis RNA deprotection enzyme RppH recognizes guanosine in the second position of its substrates.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JZU
DownloadVisualize
BU of 4jzu by Molmil
Crystal structure of the Bacillus subtilis pyrophosphohydrolase BsRppH bound to a non-hydrolysable triphosphorylated dinucleotide RNA (pcp-pGpG) - first guanosine residue in guanosine binding pocket
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, RNA (5'-R(*(GCP)P*G)-3'), RNA PYROPHOSPHOHYDROLASE
Authors:Piton, J, Larue, V, Thillier, Y, Dorleans, A, Pellegrini, O, Li de la Sierra-Gallay, I, Vasseur, J.J, Debart, F, Tisne, C, Condon, C.
Deposit date:2013-04-03
Release date:2013-05-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Bacillus subtilis RNA deprotection enzyme RppH recognizes guanosine in the second position of its substrates.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JZS
DownloadVisualize
BU of 4jzs by Molmil
Crystal structure of the Bacillus subtilis pyrophosphohydrolase BsRppH (E68A mutant)
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, dGTP pyrophosphohydrolase
Authors:Piton, J, Larue, V, Thillier, Y, Dorleans, A, Pellegrini, O, Li de la Sierra-Gallay, I, Vasseur, J.J, Debart, F, Tisne, C, Condon, C.
Deposit date:2013-04-03
Release date:2013-05-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Bacillus subtilis RNA deprotection enzyme RppH recognizes guanosine in the second position of its substrates.
Proc.Natl.Acad.Sci.USA, 110, 2013
5MQ8
DownloadVisualize
BU of 5mq8 by Molmil
Crystal structure of Rae1 (YacP) from Bacillus subtilis
Descriptor: GLYCEROL, Uncharacterized protein YacP
Authors:Piton, J, Gilet, L, Pellegrini, O, Leroy, M, Figaro, S, Condon, C.
Deposit date:2016-12-20
Release date:2017-04-19
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Rae1/YacP, a new endoribonuclease involved in ribosome-dependent mRNA decay in Bacillus subtilis.
EMBO J., 36, 2017
5MQ9
DownloadVisualize
BU of 5mq9 by Molmil
Crystal structure of Rae1 (YacP) from Bacillus subtilis (W164L mutant)
Descriptor: SULFATE ION, Uncharacterized protein YacP
Authors:Piton, J, Gilet, L, Pellegrini, O, Leroy, M, Figaro, S, Condon, C.
Deposit date:2016-12-20
Release date:2017-04-19
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (3.174 Å)
Cite:Rae1/YacP, a new endoribonuclease involved in ribosome-dependent mRNA decay in Bacillus subtilis.
EMBO J., 36, 2017
4XXX
DownloadVisualize
BU of 4xxx by Molmil
Structure of PE-PPE domains of ESX-1 secreted protein EspB, C2221
Descriptor: CHLORIDE ION, ESX-1 secretion-associated protein EspB, GLYCEROL
Authors:Piton, J, Pojer, F, Korotkov, K.V.
Deposit date:2015-01-30
Release date:2015-02-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of EspB, a secreted substrate of the ESX-1 secretion system of Mycobacterium tuberculosis.
J.Struct.Biol., 191, 2015
3T3N
DownloadVisualize
BU of 3t3n by Molmil
Molecular basis for the recognition and cleavage of RNA (UUCCGU) by the bifunctional 5'-3' exo/endoribonuclease RNase J
Descriptor: Metal dependent hydrolase, O2'methyl-RNA, ZINC ION
Authors:Dorleans, A, Li de la Sierra-Gallay, I, Piton, J, Zig, L, Gilet, L, Putzer, H, Condon, C.
Deposit date:2011-07-25
Release date:2011-10-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Molecular Basis for the Recognition and Cleavage of RNA by the Bifunctional 5'-3' Exo/Endoribonuclease RNase J.
Structure, 19, 2011
3T3O
DownloadVisualize
BU of 3t3o by Molmil
Molecular basis for the recognition and cleavage of RNA (CUGG) by the bifunctional 5'-3' exo/endoribonuclease RNase J
Descriptor: GLYCEROL, Metal dependent hydrolase, O2'methyl-RNA, ...
Authors:Dorleans, A, Li de la Sierra-Gallay, I, Piton, J, Zig, L, Gilet, L, Putzer, H, Condon, C.
Deposit date:2011-07-25
Release date:2011-10-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Basis for the Recognition and Cleavage of RNA by the Bifunctional 5'-3' Exo/Endoribonuclease RNase J.
Structure, 19, 2011
3GKR
DownloadVisualize
BU of 3gkr by Molmil
Crystal Structure of Weissella viridescens FemX:UDP-MurNAc-hexapeptide complex
Descriptor: ALANINE, FemX, GLYCEROL, ...
Authors:Delfosse, V, Piton, J, Villet, R, Lecerf, M, Arthur, M, Mayer, C.
Deposit date:2009-03-11
Release date:2010-03-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of Weissella viridescens FemX with the UDP-MurNAc-hexapeptide product of the alanine transfer reaction
To be Published
4GCW
DownloadVisualize
BU of 4gcw by Molmil
Crystal structure of RNase Z in complex with precursor tRNA(Thr)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Ribonuclease Z, TRNA(THR), ...
Authors:Pellegrini, O, Li de la Sierra-Gallay, I, Piton, J, Gilet, L, Condon, C.
Deposit date:2012-07-31
Release date:2012-10-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Activation of tRNA Maturation by Downstream Uracil Residues in B. subtilis
Structure, 20, 2012
4G3N
DownloadVisualize
BU of 4g3n by Molmil
Mycobacterium tuberculosis gyrase type IIA topoisomerase C-terminal domain at 1.4 A resolution
Descriptor: DNA gyrase subunit A
Authors:Darmon, A, Piton, J, Petrella, S, Aubry, A, Mayer, C.
Deposit date:2012-07-15
Release date:2013-08-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mycobacterium tuberculosis DNA gyrase possesses two functional GyrA-boxes.
Biochem.J., 455, 2013
6TOB
DownloadVisualize
BU of 6tob by Molmil
Structural and DNA Binding Properties of Mycobacterial Integration Host Factor mIHF
Descriptor: Integration host factor MIHF
Authors:Herrmann, T.
Deposit date:2019-12-11
Release date:2019-12-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural and DNA binding properties of mycobacterial integration host factor mIHF.
J.Struct.Biol., 209, 2020
4XWP
DownloadVisualize
BU of 4xwp by Molmil
Structure of PE-PPE domains of ESX-1 secreted protein EspB, C2221 in presence of Ca
Descriptor: CALCIUM ION, ESX-1 secretion-associated protein EspB
Authors:Korotkov, K.V.
Deposit date:2015-01-28
Release date:2015-02-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structure of EspB, a secreted substrate of the ESX-1 secretion system of Mycobacterium tuberculosis.
J.Struct.Biol., 191, 2015
4XY3
DownloadVisualize
BU of 4xy3 by Molmil
Structure of ESX-1 secreted protein EspB
Descriptor: ESX-1 secretion-associated protein EspB
Authors:Wagner, J.M, Korotkov, K.V.
Deposit date:2015-02-01
Release date:2015-02-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Structure of EspB, a secreted substrate of the ESX-1 secretion system of Mycobacterium tuberculosis.
J.Struct.Biol., 191, 2015
4XXN
DownloadVisualize
BU of 4xxn by Molmil
Structure of PE-PPE domains of ESX-1 secreted protein EspB, I222
Descriptor: CHLORIDE ION, ESX-1 secretion-associated protein EspB, SODIUM ION
Authors:Korotkov, K.V.
Deposit date:2015-01-30
Release date:2015-02-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structure of EspB, a secreted substrate of the ESX-1 secretion system of Mycobacterium tuberculosis.
J.Struct.Biol., 191, 2015

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon