Author results

5UPW
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CRYOEM STRUCTURE REFINEMENT BY INTEGRATING NMR CHEMICAL SHIFTS WITH MOLECULAR DYNAMICS SIMULATIONS
Descriptor:Gag polyprotein
Authors:Perilla, J.R.
Deposit date:2017-02-04
Release date:2017-03-01
Last modified:2017-05-03
Method:ELECTRON MICROSCOPY (5 Å)
Cite:CryoEM Structure Refinement by Integrating NMR Chemical Shifts with Molecular Dynamics Simulations.
J Phys Chem B, 121, 2017
5FJB
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CYCLOPHILIN A STABILIZE HIV-1 CAPSID THROUGH A NOVEL NON- CANONICAL BINDING SITE
Descriptor:GAG POLYPROTEIN, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A (E.C.5.2.1.8)
Authors:Liu, C., Perilla, J.R., Ning, J., Lu, M., Hou, G., Ramalhu, R., Bedwell, G.J., Ahn, J., Shi, J., Gronenborn, A.M., Prevelige Jr, P.E., Rousso, I., Aiken, C., Polenova, T., Schulten, K., Zhang, P.
Deposit date:2015-10-07
Release date:2016-03-16
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Cyclophilin a Stabilizes the HIV-1 Capsid Through a Novel Non-Canonical Binding Site.
Nat.Commun., 7, 2016
3JA6
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CRYO-ELECTRON TOMOGRAPHY AND ALL-ATOM MOLECULAR DYNAMICS SIMULATIONS REVEAL A NOVEL KINASE CONFORMATIONAL SWITCH IN BACTERIAL CHEMOTAXIS SIGNALING
Descriptor:Chemotaxis protein CheW, Chemotaxis protein CheA, Methyl-accepting chemotaxis protein 2
Authors:Cassidy, C.K., Himes, B.A., Alvarez, F.J., Ma, J., Zhao, G., Perilla, J.R., Schulten, K., Zhang, P.
Deposit date:2015-04-21
Release date:2015-12-09
Method:ELECTRON MICROSCOPY (12.7 Å)
Cite:CryoEM and computer simulations reveal a novel kinase conformational switch in bacterial chemotaxis signaling.
Elife, 4, 2015
3J4F
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STRUCTURE OF HIV-1 CAPSID PROTEIN BY CRYO-EM
Descriptor:capsid protein
Authors:Zhao, G., Perilla, J.R., Meng, X., Schulten, K., Zhang, P.
Deposit date:2013-07-11
Release date:2013-07-24
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
3J34
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STRUCTURE OF HIV-1 CAPSID PROTEIN BY CRYO-EM
Descriptor:capsid protein
Authors:Zhao, G., Perilla, J.R., Yufenyuy, E., Meng, X., Chen, B., Ning, J., Ahn, J., Gronenborn, A.M., Schulten, K., Aiken, C., Zhang, P.
Deposit date:2013-02-23
Release date:2013-05-29
Last modified:2013-06-19
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
3J3Q
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ATOMIC-LEVEL STRUCTURE OF THE ENTIRE HIV-1 CAPSID
Descriptor:HIV-1 capsid
Authors:Perilla, J.R., Zhao, G., Zhang, P., Schulten, K.J.
Deposit date:2013-04-12
Release date:2013-05-29
Last modified:2014-12-10
Method:ELECTRON MICROSCOPY
Cite:Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
3J3Y
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ATOMIC-LEVEL STRUCTURE OF THE ENTIRE HIV-1 CAPSID (186 HEXAMERS + 12 PENTAMERS)
Descriptor:HIV-1 capsid
Authors:Perilla, J.R., Zhao, G., Zhang, P., Schulten, K.J.
Deposit date:2013-05-06
Release date:2013-05-29
Last modified:2014-12-10
Method:ELECTRON MICROSCOPY
Cite:Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
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