Author results

2ZD7
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THE STRUCTURE OF VPS75 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 75)
Descriptor:Vacuolar protein sorting-associated protein 75, EVDLPLSDEEPSS
Authors:Park, Y.J., Luger, K.
Deposit date:2007-11-20
Release date:2008-08-12
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Histone chaperone specificity in Rtt109 activation.
Nat.Struct.Mol.Biol., 15, 2008
2AYU
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THE STRUCTURE OF NUCLEOSOME ASSEMBLY PROTEIN SUGGESTS A MECHANISM FOR HISTONE BINDING AND SHUTTLING
Descriptor:Nucleosome assembly protein
Authors:Park, Y.J., Luger, K.
Deposit date:2005-09-08
Release date:2006-02-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of nucleosome assembly protein 1.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2Z2R
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NUCLEOSOME ASSEMBLY PROTEINS I (NAP-1, 74-365)
Descriptor:Nucleosome assembly protein
Authors:Park, Y.J., Luger, K.
Deposit date:2007-05-25
Release date:2008-03-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:A beta-hairpin comprising the nuclear localization sequence sustains the self-associated states of nucleosome assembly protein 1
J.Mol.Biol., 375, 2008
6N38
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STRUCTURE OF THE TYPE VI SECRETION SYSTEM TSSK-TSSF-TSSG BASEPLATE SUBCOMPLEX REVEALED BY CRYO-ELECTRON MICROSCOPY - FULL MAP SHARPENED
Descriptor:Putative type VI secretion protein, Unassigned protein
Authors:Park, Y.J., Lacourse, K.D., Cambillau, C., Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio, F., Mougous, J.D., Veesler, D.
Deposit date:2018-11-14
Release date:2018-12-26
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of the type VI secretion system TssK-TssF-TssG baseplate subcomplex revealed by cryo-electron microscopy.
Nat Commun, 9, 2018
6Q04
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MERS-COV S STRUCTURE IN COMPLEX WITH 5-N-ACETYL NEURAMINIC ACID
Descriptor:Spike glycoprotein, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Park, Y.J., Walls, A.C., Wang, Z., Sauer, M., Li, W., Tortorici, M.A., Bosch, B.J., DiMaio, F.D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-08-01
Release date:2019-12-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structures of MERS-CoV spike glycoprotein in complex with sialoside attachment receptors.
Nat.Struct.Mol.Biol., 26, 2019
6Q05
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MERS-COV S STRUCTURE IN COMPLEX WITH SIALYL-LEWISX
Descriptor:Spike glycoprotein, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Park, Y.J., Walls, A.C., Wang, Z., Sauer, M., Li, W., Tortorici, M.A., Bosch, B.J., DiMaio, F.D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-08-01
Release date:2019-12-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structures of MERS-CoV spike glycoprotein in complex with sialoside attachment receptors.
Nat.Struct.Mol.Biol., 26, 2019
6Q06
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MERS-COV S STRUCTURE IN COMPLEX WITH 2,3-SIALYL-N-ACETYL-LACTOSAMINE
Descriptor:Spike glycoprotein, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Park, Y.J., Walls, A.C., Wang, Z., Sauer, M., Li, W., Tortorici, M.A., Bosch, B.J., DiMaio, F.D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-08-01
Release date:2019-12-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structures of MERS-CoV spike glycoprotein in complex with sialoside attachment receptors.
Nat.Struct.Mol.Biol., 26, 2019
6Q07
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MERS-COV S STRUCTURE IN COMPLEX WITH 2,6-SIALYL-N-ACETYL-LACTOSAMINE
Descriptor:Spike glycoprotein, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Park, Y.J., Walls, A.C., Wang, Z., Sauer, M., Li, W., Tortorici, M.A., Bosch, B.J., DiMaio, F.D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-08-01
Release date:2019-12-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structures of MERS-CoV spike glycoprotein in complex with sialoside attachment receptors.
Nat.Struct.Mol.Biol., 26, 2019
6BQM
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SECRETED SERINE PROTEASE VESC FROM VIBRIO CHOLERAE
Descriptor:serine protease VesC
Authors:Park, Y.J., Korotkov, K.V., Delarosa, J.R., Turley, S., DiMaio, F., Hol, W.G.J.
Deposit date:2017-11-28
Release date:2018-11-28
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Secondary mutations in Type II secretion mutants of Vibrio cholerae: inactivation of VesC
To be Published
7JV2
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SARS-COV-2 SPIKE IN COMPLEX WITH THE S2H13 NEUTRALIZING ANTIBODY FAB FRAGMENT (LOCAL REFINEMENT OF THE RECEPTOR-BINDING MOTIF AND FAB VARIABLE DOMAINS)
Descriptor:S2H13 Fab heavy chain, S2H13 Fab light chain, SARS-CoV-2 spike glycoprotein
Authors:Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.
Deposit date:2020-08-20
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell(Cambridge,Mass.), 2020
7JV4
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SARS-COV-2 SPIKE IN COMPLEX WITH THE S2H13 NEUTRALIZING ANTIBODY (ONE RBD OPEN)
Descriptor:SARS-CoV-2 spike glycoprotein, S2H13 Fab heavy chain, S2H13 Fab light chain, ...
Authors:Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.
Deposit date:2020-08-20
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell(Cambridge,Mass.), 2020
7JV6
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SARS-COV-2 SPIKE IN COMPLEX WITH THE S2H13 NEUTRALIZING ANTIBODY (CLOSED CONFORMATION)
Descriptor:SARS-CoV-2 spike glycoprotein, S2H13 Fab heavy chain, S2H13 Fab light chain, ...
Authors:Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.
Deposit date:2020-08-20
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell(Cambridge,Mass.), 2020
7JVA
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SARS-COV-2 SPIKE IN COMPLEX WITH THE S2A4 NEUTRALIZING ANTIBODY FAB FRAGMENT (LOCAL REFINEMENT OF THE RECEPTOR-BINDING DOMAIN AND FAB VARIABLE DOMAINS)
Descriptor:S2A4 Fab heavy chain, S2A4 Fab light chain, SARS-CoV-2 spike glycoprotein, ...
Authors:Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.
Deposit date:2020-08-20
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell(Cambridge,Mass.), 2020
7JVC
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SARS-COV-2 SPIKE IN COMPLEX WITH THE S2A4 NEUTRALIZING ANTIBODY FAB FRAGMENT
Descriptor:SARS-CoV-2 spike glycoprotein, S2A4 Fab heavy chain, S2A4 Fab light chain, ...
Authors:Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.
Deposit date:2020-08-20
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell(Cambridge,Mass.), 2020
7JXC
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MAPPING NEUTRALIZING AND IMMUNODOMINANT SITES ON THE SARS-COV-2 SPIKE RECEPTOR-BINDING DOMAIN BY STRUCTURE-GUIDED HIGH-RESOLUTION SEROLOGY
Descriptor:S2H14 antigen-binding (Fab) fragment, NONAETHYLENE GLYCOL
Authors:Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.
Deposit date:2020-08-27
Release date:2020-10-14
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell(Cambridge,Mass.), 2020
7JXD
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MAPPING NEUTRALIZING AND IMMUNODOMINANT SITES ON THE SARS-COV-2 SPIKE RECEPTOR-BINDING DOMAIN BY STRUCTURE-GUIDED HIGH-RESOLUTION SEROLOGY
Descriptor:S2A4 antigen-binding (Fab) fragment
Authors:Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.
Deposit date:2020-08-27
Release date:2020-10-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell(Cambridge,Mass.), 2020
7JZL
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SARS-COV-2 SPIKE IN COMPLEX WITH LCB1 (2RBDS OPEN)
Descriptor:Spike glycoprotein, LCB1, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Park, Y.J., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-09-02
Release date:2020-09-23
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:De novo design of picomolar SARS-CoV-2 miniprotein inhibitors.
Science, 2020
7JZM
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SARS-COV-2 SPIKE IN COMPLEX WITH LCB3 (LOCAL REFINEMENT OF THE RBD AND LCB3)
Descriptor:LCB3, Spike glycoprotein, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Park, Y.J., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-09-02
Release date:2020-09-23
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:De novo design of picomolar SARS-CoV-2 miniprotein inhibitors.
Science, 2020
7JZN
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SARS-COV-2 SPIKE IN COMPLEX WITH LCB3 (2RBDS OPEN)
Descriptor:Spike glycoprotein, LCB3, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Park, Y.J., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-09-02
Release date:2020-09-23
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:De novo design of picomolar SARS-CoV-2 miniprotein inhibitors.
Science, 2020
7JZU
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SARS-COV-2 SPIKE IN COMPLEX WITH LCB1 (LOCAL REFINEMENT OF THE RBD AND LCB1)
Descriptor:LCB1, Spike glycoprotein, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Park, Y.J., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-09-02
Release date:2020-09-23
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:De novo design of picomolar SARS-CoV-2 miniprotein inhibitors.
Science, 2020
4KSR
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CRYSTAL STRUCTURE OF THE VIBRIO CHOLERAE ATPASE GSPE HEXAMER
Descriptor:Type II secretion system protein E, Hemolysin-coregulated protein
Authors:Hol, W.G., Turley, S., Lu, C.Y., Park, Y.J., Marionni, S.T., Lee, K., Patrick, M., Sandkvist, M., Bush, M., Shah, R.
Deposit date:2013-05-17
Release date:2013-09-04
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Hexamers of the Type II Secretion ATPase GspE from Vibrio cholerae with Increased ATPase Activity.
Structure, 21, 2013
4KSS
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CRYSTAL STRUCTURE OF VIBRIO CHOLERAE ATPASE GSPSE HEXAMER
Descriptor:Type II secretion system protein E, hemolysin-coregulated protein
Authors:Hol, W.G., Turley, S., Lu, C.Y., Park, Y.J.
Deposit date:2013-05-17
Release date:2013-09-04
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (7.58 Å)
Cite:Hexamers of the Type II Secretion ATPase GspE from Vibrio cholerae with Increased ATPase Activity.
Structure, 21, 2013
5L2P
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STRUCTURE OF ARYLESTERASE
Descriptor:Arylesterase
Authors:Lee, H.B., Park, Y.J.
Deposit date:2016-08-02
Release date:2017-08-09
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Structure of arylesterase
To Be Published
6NB3
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MERS-COV COMPLEX WITH HUMAN NEUTRALIZING LCA60 ANTIBODY FAB FRAGMENT (STATE 1)
Descriptor:Spike glycoprotein, LCA60 light chain, LCA60 heavy chain, ...
Authors:Walls, A.C., Xiong, X., Park, Y.J., Tortorici, M.A., Snijder, S., Quispe, J., Cameroni, E., Gopal, R., Mian, D., Lanzavecchia, A., Zambon, M., Rey, F.A., Corti, D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-12-06
Release date:2019-02-06
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Unexpected Receptor Functional Mimicry Elucidates Activation of Coronavirus Fusion.
Cell, 176, 2019
6NB4
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MERS-COV S COMPLEX WITH HUMAN NEUTRALIZING LCA60 ANTIBODY FAB FRAGMENT (STATE 2)
Descriptor:Spike glycoprotein, LCA60 heavy chain, LCA60 light chain, ...
Authors:Walls, A.C., Xiong, X., Park, Y.J., Tortorici, M.A., Snijder, S., Quispe, J., Cameroni, E., Gopal, R., Mian, D., Lanzavecchia, A., Zambon, M., Rey, F.A., Corti, D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-12-06
Release date:2019-02-06
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Unexpected Receptor Functional Mimicry Elucidates Activation of Coronavirus Fusion.
Cell, 176, 2019
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170172
PDB entries from 2020-10-21