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5O1Q
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LYSF1 SH3B DOMAIN STRUCTURE
Descriptor:sh3b domain
Authors:Benesik, M., Novacek, J., Janda, L., Dopitova, R., Pernisova, M., Melkova, K., Tisakova, L., Doskar, J., Zidek, L., Hejatko, J., Pantucek, R.
Deposit date:2017-05-19
Release date:2017-09-20
Last modified:2019-05-08
Method:SOLUTION NMR
Cite:Role of SH3b binding domain in a natural deletion mutant of Kayvirus endolysin LysF1 with a broad range of lytic activity.
Virus Genes, 54, 2018
5LI2
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BACTERIOPHAGE PHI812K1-420 TAIL SHEATH AND TAIL TUBE PROTEIN IN NATIVE TAIL
Descriptor:tail sheath protein, Phage-like element PBSX protein XkdM
Authors:Novacek, J., Siborova, M., Benesik, M., Pantucek, R., Doskar, J., Plevka, P.
Deposit date:2016-07-14
Release date:2017-07-19
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5LI4
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BACTERIOPHAGE PHI812K1-420 TAIL SHEATH PROTEIN AFTER CONTRACTION
Descriptor:tail sheath protein
Authors:Novacek, J., Siborova, M., Benesik, M., Pantucek, R., Doskar, J., Plevka, P.
Deposit date:2016-07-14
Release date:2017-07-19
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5LII
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BACTERIOPHAGE PHI812K1-420 MAJOR CAPSID PROTEIN
Descriptor:Major capsid protein
Authors:Novacek, J., Siborova, M., Benesik, M., Pantucek, R., Doskar, J., Plevka, P.
Deposit date:2016-07-14
Release date:2017-07-19
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5LIJ
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POLYALANINE CHAIN BUILT IN BACTERIOPHAGE PHI812K1-420 CEMENT PROTEIN DENSITY MAP
Descriptor:polyalanine chain built in bacteriophage phi812K1-420 cement protein density map
Authors:Novacek, J., Siborova, M., Benesik, M., Pantucek, R., Doskar, J., Plevka, P.
Deposit date:2016-07-14
Release date:2017-07-26
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
6TB9
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CAPSID OF NATIVE GTA PARTICLE COMPUTED WITH C5 SYMMETRY
Descriptor:Major capsid protein Rcc01687, Head spike base Rcc01079, Head spike fiber Rcc01080
Authors:Bardy, P., Fuzik, T., Hrebik, D., Pantucek, R., Beatty, J.T., Plevka, P.
Deposit date:2019-11-01
Release date:2020-07-22
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TBA
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VIRION OF NATIVE GENE TRANSFER AGENT (GTA) PARTICLE
Descriptor:Phage major capsid protein, HK97 family, Uncharacterized protein, ...
Authors:Bardy, P., Fuzik, T., Hrebik, D., Pantucek, R., Beatty, J.T., Plevka, P.
Deposit date:2019-11-01
Release date:2020-07-22
Method:ELECTRON MICROSCOPY (4.54 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TE8
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NECK OF NATIVE GTA PARTICLE COMPUTED WITH C12 SYMMETRY
Descriptor:Adaptor protein Rcc01688, Phage portal protein, HK97 family
Authors:Bardy, P., Fuzik, T., Hrebik, D., Pantucek, R., Beatty, J.T., Plevka, P.
Deposit date:2019-11-11
Release date:2020-07-22
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TE9
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NECK OF NATIVE GTA PARTICLE COMPUTED WITH C6 SYMMETRY
Descriptor:Adaptor protein Rcc01688, Phage portal protein, HK97 family, ...
Authors:Bardy, P., Fuzik, T., Hrebik, D., Pantucek, R., Beatty, J.T., Plevka, P.
Deposit date:2019-11-11
Release date:2020-07-22
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TEA
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TAIL OF NATIVE GTA PARTICLE COMPUTED WITH HELICAL REFINEMENT, C6 SYMMETRY
Descriptor:Phage major tail protein, TP901-1 family
Authors:Bardy, P., Fuzik, T., Hrebik, D., Pantucek, R., Beatty, J.T., Plevka, P.
Deposit date:2019-11-11
Release date:2020-07-22
Method:ELECTRON MICROSCOPY (3.89 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TEB
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TAIL-BASEPLATE INTERFACE OF NATIVE GTA PARTICLE COMPUTED WITH C6 SYMMETRY
Descriptor:Tail tube protein Rcc01691, Distal tail protein Rcc01695
Authors:Bardy, P., Fuzik, T., Hrebik, D., Pantucek, R., Beatty, J.T., Plevka, P.
Deposit date:2019-11-11
Release date:2020-07-22
Method:ELECTRON MICROSCOPY (4.14 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TEH
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BASEPLATE OF NATIVE GTA PARTICLE COMPUTED WITH C3 SYMMETRY
Descriptor:Putative gene transfer agent protein, IRON/SULFUR CLUSTER
Authors:Bardy, P., Fuzik, T., Hrebik, D., Pantucek, R., Beatty, J.T., Plevka, P.
Deposit date:2019-11-12
Release date:2020-07-22
Method:ELECTRON MICROSCOPY (3.99 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TO8
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NECK OF EMPTY GTA PARTICLE COMPUTED WITH C12 SYMMETRY
Descriptor:Adaptor protein Rcc01688, Portal protein Rcc01684
Authors:Bardy, P., Fuzik, T., Hrebik, D., Pantucek, R., Beatty, J.T., Plevka, P.
Deposit date:2019-12-11
Release date:2020-07-22
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TOA
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NECK OF EMPTY GTA PARTICLE COMPUTED WITH C6 SYMMETRY
Descriptor:Adaptor protein Rcc01688, Portal protein Rcc01684, Tail terminator protein Rcc01690, ...
Authors:Bardy, P., Fuzik, T., Hrebik, D., Pantucek, R., Beatty, J.T., Plevka, P.
Deposit date:2019-12-11
Release date:2020-07-22
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TSU
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CAPSID OF EMPTY GTA PARTICLE COMPUTED WITH C5 SYMMETRY
Descriptor:Major capsid protein Rcc01687, Uncharacterized protein
Authors:Bardy, P., Fuzik, T., Hrebik, D., Pantucek, R., Beatty, J.T., Plevka, P.
Deposit date:2019-12-21
Release date:2020-07-22
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TSV
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TAIL OF EMPTY GTA PARTICLE COMPUTED WITH HELICAL REFINEMENT, C6 SYMMETRY
Descriptor:Tail tube protein Rcc01691
Authors:Bardy, P., Fuzik, T., Hrebik, D., Pantucek, R., Beatty, J.T., Plevka, P.
Deposit date:2019-12-21
Release date:2020-07-22
Method:ELECTRON MICROSCOPY (3.78 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TSW
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ISOMETRIC CAPSID OF EMPTY GTA PARTICLE COMPUTED WITH I4(I,N25R) SYMMETRY
Descriptor:Major capsid protein Rcc01687
Authors:Bardy, P., Fuzik, T., Hrebik, D., Pantucek, R., Beatty, J.T., Plevka, P.
Deposit date:2019-12-21
Release date:2020-07-22
Method:ELECTRON MICROSCOPY (4.03 Å)
Cite:Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TUI
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VIRION OF EMPTY GTA PARTICLE
Descriptor:Phage major capsid protein, HK97 family, Uncharacterized protein, ...
Authors:Bardy, P., Fuzik, T., Hrebik, D., Pantucek, R., Beatty, J.T., Plevka, P.
Deposit date:2020-01-07
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (10.47 Å)
Cite:Virion of empty GTA particle
Nat Commun, 11, 2020
6IAB
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TAIL FIBER OF STAPHYLOCOCCUS AUREUS PHAGE P68
Descriptor:Tail Fiber of phage P68
Authors:Hrebik, D., Karel, S., Plevka, P.
Deposit date:2018-11-26
Release date:2019-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and genome ejection mechanism ofStaphylococcus aureusphage P68.
Sci Adv, 5, 2019
6IAC
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PORTAL AND TAIL OF NATIVE BACTERIOPHAGE P68
Descriptor:Portal protein, Lower collar protein, Minor structural protein, ...
Authors:Hrebik, D., Skubnik, K., Fuzik, T., Plevka, P.
Deposit date:2018-11-26
Release date:2019-11-06
Last modified:2019-11-13
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure and genome ejection mechanism ofStaphylococcus aureusphage P68.
Sci Adv, 5, 2019
6IAT
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ICOSAHEDRALLY AVERAGED CAPSID OF BACTERIOPHAGE P68
Descriptor:Major head protein, Arstotzka protein
Authors:Hrebik, D., Skubnik, K., Fuzik, T., Plevka, P.
Deposit date:2018-11-27
Release date:2019-11-06
Last modified:2019-11-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure and genome ejection mechanism ofStaphylococcus aureusphage P68.
Sci Adv, 5, 2019
6IAW
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STRUCTURE OF HEAD FIBER AND INNER CORE PROTEIN GP22 OF NATIVE BACTERIOPHAGE P68
Descriptor:Major head protein, Arstotzka protein, Head fiber, ...
Authors:Hrebik, D., Skubnik, K., Fuzik, T., Plevka, P.
Deposit date:2018-11-27
Release date:2019-11-06
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure and genome ejection mechanism ofStaphylococcus aureusphage P68.
Sci Adv, 5, 2019
6IB1
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ICOSAHEDRALLY AVERAGED CAPSID OF EMPTY PARTICLE OF BACTERIOPHAGE P68
Descriptor:Major head protein, Uncharacterized protein
Authors:Hrebik, D., Skubnik, K., Fuzik, T., Plevka, P.
Deposit date:2018-11-28
Release date:2019-11-06
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and genome ejection mechanism ofStaphylococcus aureusphage P68.
Sci Adv, 5, 2019
6Q3G
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STRUCTURE OF NATIVE BACTERIOPHAGE P68
Descriptor:Major head protein, Arstotzka protein, Portal protein, ...
Authors:Dominik, H., Karel, S., Fuzik, T., Plevka, P.
Deposit date:2018-12-04
Release date:2019-11-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure and genome ejection mechanism ofStaphylococcus aureusphage P68.
Sci Adv, 5, 2019
5M9F
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STRUCTURE OF THE TWO C-TERMINAL DOMAINS OF BACTERIOPHAGE K GP144
Descriptor:ORF68, ACETATE ION, SODIUM ION
Authors:Liu, A., Nguyen, T.H., van Raaij, M.J.
Deposit date:2016-11-01
Release date:2017-12-20
Last modified:2019-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of a Putative Receptor-Binding Protein of Staphylococcus Virus K
To Be Published
170172
PDB entries from 2020-10-21