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5DCV
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BU of 5dcv by Molmil
Crystal structure of PhoRpp38-SL12M complex
Descriptor: 50S ribosomal protein L7Ae, RNA (47-MER)
Authors:Oshima, K, Tanaka, Y, Yao, M.
Deposit date:2015-08-24
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.401 Å)
Cite:Structural basis for recognition of a kink-turn motif by an archaeal homologue of human RNase P protein Rpp38
Biochem.Biophys.Res.Commun., 474, 2016
5XTM
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BU of 5xtm by Molmil
Crystal structure of PhoRpp38 bound to a K-turn in P12.2 helix
Descriptor: 50S ribosomal protein L7Ae, MAGNESIUM ION, RNA (47-MER)
Authors:Oshima, K, Kimura, M.
Deposit date:2017-06-20
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the archaeal RNase P protein Rpp38 in complex with RNA fragments containing a K-turn motif.
Acta Crystallogr F Struct Biol Commun, 74, 2018
5Y7M
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BU of 5y7m by Molmil
Crystal structure of PhoRpp38 bound to a K-turn in P12.1 helix
Descriptor: 50S ribosomal protein L7Ae, GUANOSINE-5'-TRIPHOSPHATE, RNA (52-MER), ...
Authors:Oshima, K, Kimura, M.
Deposit date:2017-08-01
Release date:2018-02-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structures of the archaeal RNase P protein Rpp38 in complex with RNA fragments containing a K-turn motif.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6LL8
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BU of 6ll8 by Molmil
Type II inorganic pyrophosphatase (PPase) from the psychrophilic bacterium Shewanella sp. AS-11, Mg-PNP form
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, FLUORIDE ION, ...
Authors:Horitani, M, Kusubayashi, K, Oshima, K, Yato, A, Sugimoto, H, Watanabe, K.
Deposit date:2019-12-21
Release date:2020-03-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:X-ray Crystallography and Electron Paramagnetic Resonance Spectroscopy Reveal Active Site Rearrangement of Cold-Adapted Inorganic Pyrophosphatase.
Sci Rep, 10, 2020
6LL7
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BU of 6ll7 by Molmil
Type II inorganic pyrophosphatase (PPase) from the psychrophilic bacterium Shewanella sp. AS-11, Mn-activated form
Descriptor: CALCIUM ION, Inorganic pyrophosphatase, MANGANESE (II) ION
Authors:Horitani, M, Kusubayashi, K, Oshima, K, Yato, A, Sugimoto, H, Watanabe, K.
Deposit date:2019-12-21
Release date:2020-03-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray Crystallography and Electron Paramagnetic Resonance Spectroscopy Reveal Active Site Rearrangement of Cold-Adapted Inorganic Pyrophosphatase.
Sci Rep, 10, 2020
7CK5
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BU of 7ck5 by Molmil
Solution structure of 28 amino acid polypeptide (354-381) in Plantago asiatica mosaic virus replicase bound to SDS micelle
Descriptor: PlAMV replicase peptide from RNA-dependent RNA polymerase
Authors:Komatsu, K, Sasaki, N, Yoshida, T, Suzuki, K, Masujima, Y, Hashimoto, M, Watanabe, S, Tochio, N, Kigawa, T, Yamaji, Y, Oshima, K, Namba, S, Nelson, R, Arie, T.
Deposit date:2020-07-15
Release date:2021-07-21
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Identification of a Proline-Kinked Amphipathic alpha-Helix Downstream from the Methyltransferase Domain of a Potexvirus Replicase and Its Role in Virus Replication and Perinuclear Complex Formation.
J.Virol., 95, 2021
6JQA
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BU of 6jqa by Molmil
Crystal structure of phyllogen, a phyllody inducing effector protein of phytoplasma.
Descriptor: IODIDE ION, Phytoplasmal effector causing phyllody 1
Authors:Miyatake, H, Maejima, K.
Deposit date:2019-03-29
Release date:2019-05-15
Last modified:2019-05-29
Method:X-RAY DIFFRACTION (2.402 Å)
Cite:Crystal structure of phyllogen, a phyllody-inducing effector protein of phytoplasma.
Biochem.Biophys.Res.Commun., 513, 2019

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