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3A9Y
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BU of 3a9y by Molmil
Crystal structure of rat selenocysteine lyase in complex with L-cysteine
Descriptor: CYSTEINE, GLYCEROL, PHOSPHATE ION, ...
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-09
Release date:2010-03-16
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
3A9X
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BU of 3a9x by Molmil
Crystal structure of rat selenocysteine lyase
Descriptor: PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, Selenocysteine lyase
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-08
Release date:2010-03-16
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
2YXO
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BU of 2yxo by Molmil
Histidinol Phosphate Phosphatase complexed with Sulfate
Descriptor: FE (III) ION, GLYCEROL, Histidinol phosphatase, ...
Authors:Omi, R.
Deposit date:2007-04-26
Release date:2007-11-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Monofunctional Histidinol Phosphate Phosphatase from Thermus thermophilus HB8.
Biochemistry, 46, 2007
2YZ5
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BU of 2yz5 by Molmil
Histidinol Phosphate Phosphatase complexed with Phosphate
Descriptor: FE (III) ION, GLYCEROL, Histidinol phosphatase, ...
Authors:Omi, R.
Deposit date:2007-05-03
Release date:2007-11-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Monofunctional Histidinol Phosphate Phosphatase from Thermus thermophilus HB8.
Biochemistry, 46, 2007
2Z4G
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BU of 2z4g by Molmil
Histidinol Phosphate Phosphatase from Thermus thermophilus HB8
Descriptor: FE (III) ION, GLYCEROL, Histidinol phosphatase, ...
Authors:Omi, R.
Deposit date:2007-06-17
Release date:2007-11-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Monofunctional Histidinol Phosphate Phosphatase from Thermus thermophilus HB8.
Biochemistry, 46, 2007
3A9Z
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BU of 3a9z by Molmil
Crystal structure of ras selenocysteine lyase in complex with selenopropionate
Descriptor: 3-selanylpropanoic acid, PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-09
Release date:2010-03-16
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
1KA9
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BU of 1ka9 by Molmil
Imidazole Glycerol Phosphate Synthase
Descriptor: imidazole glycerol phosphate synthase
Authors:Omi, R, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-11-01
Release date:2002-12-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of imidazole glycerol phosphate synthase from Thermus thermophilus HB8: open-closed conformational change and ammonia tunneling.
J.Biochem., 132, 2002
2DOU
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BU of 2dou by Molmil
probable N-succinyldiaminopimelate aminotransferase (TTHA0342) from Thermus thermophilus HB8
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SULFATE ION, probable N-succinyldiaminopimelate aminotransferase
Authors:Omi, R, Goto, M, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-03
Release date:2006-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:probable N-succinyldiaminopimelate aminotransferase (TTHA0342) from Thermus thermophilus HB8
To be published
2DQ4
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BU of 2dq4 by Molmil
Crystal structure of threonine 3-dehydrogenase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, L-threonine 3-dehydrogenase, ZINC ION
Authors:Omi, R, Yao, T, Goto, M, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-19
Release date:2007-06-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of threonine 3-dehydrogenase
To be Published
2EJV
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BU of 2ejv by Molmil
Crystal structure of threonine 3-dehydrogenase complexed with NAD+
Descriptor: L-threonine 3-dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Omi, R, Yao, T, Goto, M, Miyahara, I, Hirotsu, K.
Deposit date:2007-03-20
Release date:2008-03-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of threonine 3-dehydrogenase
To be Published
2EJW
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BU of 2ejw by Molmil
Homoserine Dehydrogenase from Thermus thermophilus HB8
Descriptor: GLYCEROL, Homoserine dehydrogenase, MAGNESIUM ION, ...
Authors:Omi, R, Goto, M, Miyahara, I, Hirotsu, K.
Deposit date:2007-03-21
Release date:2008-02-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Homoserine Dehydrogenase from Thermus thermophilus HB8
To be Published
1UIM
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BU of 1uim by Molmil
Crystal Structure of Threonine Synthase from Thermus Thermophilus HB8, Orthorhombic Crystal Form
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Threonine Synthase
Authors:Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-17
Release date:2003-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structures of Threonine Synthase from Thermus thermophilus HB8: Conformational change, substrate recognition, and mechanism.
J.BIOL.CHEM., 278, 2003
1UIN
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BU of 1uin by Molmil
Crystal Structure of Threonine Synthase from Thermus Thermophilus HB8, Trigonal Crystal Form
Descriptor: PYRIDOXAL-5'-PHOSPHATE, SULFATE ION, Threonine Synthase
Authors:Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-17
Release date:2003-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structures of Threonine Synthase from Thermus thermophilus HB8: Conformational change, substrate recognition, and mechanism.
J.BIOL.CHEM., 278, 2003
1V72
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BU of 1v72 by Molmil
Crystal Structure of Phenylserine Aldolase from Pseudomonas Putida
Descriptor: Aldolase, PYRIDOXAL-5'-PHOSPHATE, ZINC ION
Authors:Omi, R.
Deposit date:2003-12-09
Release date:2005-03-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure of Phenylserine Aldolase from Pseudomonas Putida
To be Published
1V7C
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BU of 1v7c by Molmil
Crystal structure of threonine synthase from thermus thermophilus hb8 in complex with a substrate analogue
Descriptor: (2E)-2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]-5-PHOSPHONOPENT-2-ENOIC ACID, THREONINE SYNTHASE
Authors:Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-12-16
Release date:2003-12-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of threonine synthase from Thermus thermophilus HB8: conformational change, substrate recognition, and mechanism.
J.Biol.Chem., 278, 2003
1VB3
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BU of 1vb3 by Molmil
Crystal Structure of Threonine Synthase from Escherichia coli
Descriptor: 2-OXO-5-PHOSPHONOPENTANOIC ACID, SULFATE ION, Threonine synthase
Authors:Omi, R.
Deposit date:2004-02-21
Release date:2005-06-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Threonine Synthase from Escherichia coli
To be Published
1VE4
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BU of 1ve4 by Molmil
ATP-Phosphoribosyltransferase(hisG) from Thermus thermophilus HB8
Descriptor: ATP phosphoribosyltransferase, GLYCEROL, SULFATE ION
Authors:Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-27
Release date:2005-06-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of ATP-phosphoribosyltransferase(HisG)
To be Published
1WLY
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BU of 1wly by Molmil
Crystal Structure of 2-Haloacrylate Reductase
Descriptor: 2-haloacrylate reductase
Authors:Omi, R.
Deposit date:2004-06-30
Release date:2005-10-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structure of 2-Haloacrylate Reductase
To be Published
1Y37
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BU of 1y37 by Molmil
Structure of Fluoroacetate Dehalogenase from Burkholderia sp. FA1
Descriptor: Fluoroacetate Dehalogenase, MAGNESIUM ION
Authors:Omi, R.
Deposit date:2004-11-23
Release date:2006-02-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Fluoroacetate Dehalogenase FA1
To be Published
3B12
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BU of 3b12 by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase D104 mutant from Burkholderia sp. FA1 in complex with fluoroacetate
Descriptor: Fluoroacetate dehalogenase, MAGNESIUM ION, fluoroacetic acid
Authors:Omi, R, Hirotsu, K.
Deposit date:2011-06-19
Release date:2012-06-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Substrate specificity of fluoroacetate dehalogenase: an insight from crystallographic analysis, fluorescence spectroscopy, and theoretical computations
Chemistry, 18, 2012
4N2X
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BU of 4n2x by Molmil
Crystal Structure of DL-2-haloacid dehalogenase
Descriptor: DL-2-haloacid dehalogenase, GLYCEROL
Authors:Siwek, A, Omi, R, Hirotsu, K, Jitsumori, K, Esaki, N, Kurihara, T, Paneth, P.
Deposit date:2013-10-06
Release date:2013-11-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Binding modes of DL-2-haloacid dehalogenase revealed by crystallography, modeling and isotope effects studies.
Arch.Biochem.Biophys., 540, 2013
3WJ8
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BU of 3wj8 by Molmil
Crystal Structure of DL-2-haloacid dehalogenase mutant with 2-bromo-2-methylpropionate
Descriptor: 2-bromo-2-methylpropanoic acid, DL-2-haloacid dehalogenase, GLYCEROL
Authors:Siwek, A, Omi, R, Hirotsu, K, Jitsumori, K, Esaki, N, Kurihara, T, Paneth, P.
Deposit date:2013-10-07
Release date:2013-11-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Binding modes of DL-2-haloacid dehalogenase revealed by crystallography, modeling and isotope effects studies.
Arch.Biochem.Biophys., 540, 2013
4Z35
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BU of 4z35 by Molmil
Crystal Structure of Human Lysophosphatidic Acid Receptor 1 in complex with ONO-9910539
Descriptor: (2S)-2,3-dihydroxypropyl (7Z)-tetradec-7-enoate, 3-{1-[(2S,3S)-3-(4-acetyl-3,5-dimethoxyphenyl)-2-(2,3-dihydro-1H-inden-2-ylmethyl)-3-hydroxypropyl]-4-(methoxycarbonyl)-1H-pyrrol-3-yl}propanoic acid, Lysophosphatidic acid receptor 1,Soluble cytochrome b562
Authors:Chrencik, J.E, Roth, C.B, Terakado, M, Kurata, H, Omi, R, Kihara, Y, Warshaviak, D, Nakade, S, Asmar-Rovira, G, Mileni, M, Mizuno, H, Griffith, M.T, Rodgers, C, Han, G.W, Velasquez, J, Chun, J, Stevens, R.C, Hanson, M.A, GPCR Network (GPCR)
Deposit date:2015-03-30
Release date:2015-06-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of Antagonist Bound Human Lysophosphatidic Acid Receptor 1.
Cell, 161, 2015
4Z36
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BU of 4z36 by Molmil
Crystal Structure of Human Lysophosphatidic Acid Receptor 1 in complex with ONO-3080573
Descriptor: (2S)-2,3-dihydroxypropyl (7Z)-tetradec-7-enoate, 1-(4-{[(2S,3R)-2-(2,3-dihydro-1H-inden-2-yloxy)-3-(3,5-dimethoxy-4-methylphenyl)-3-hydroxypropyl]oxy}phenyl)cyclopropanecarboxylic acid, Lysophosphatidic acid receptor 1,Soluble cytochrome b562
Authors:Chrencik, J.E, Roth, C.B, Terakado, M, Kurata, H, Omi, R, Kihara, Y, Warshaviak, D, Nakade, S, Asmar-Rovira, G, Mileni, M, Mizuno, H, Griffith, M.T, Rodgers, C, Han, G.W, Velasquez, J, Chun, J, Stevens, R.C, Hanson, M.A, GPCR Network (GPCR)
Deposit date:2015-03-30
Release date:2015-06-03
Last modified:2015-07-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of Antagonist Bound Human Lysophosphatidic Acid Receptor 1.
Cell, 161, 2015
4Z34
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BU of 4z34 by Molmil
Crystal Structure of Human Lysophosphatidic Acid Receptor 1 in complex with ONO9780307
Descriptor: (2S)-2,3-dihydroxypropyl (7Z)-tetradec-7-enoate, Lysophosphatidic acid receptor 1, Soluble cytochrome b562, ...
Authors:Chrencik, J.E, Roth, C.B, Terakado, M, Kurata, H, Omi, R, Kihara, Y, Warshaviak, D, Nakade, S, Asmar-Rovira, G, Mileni, M, Mizuno, H, Griffith, M.T, Rodgers, C, Han, G.W, Velasquez, J, Chun, J, Stevens, R.C, Hanson, M.A, GPCR Network (GPCR)
Deposit date:2015-03-30
Release date:2015-06-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of Antagonist Bound Human Lysophosphatidic Acid Receptor 1.
Cell, 161, 2015

 

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