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1V8J
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BU of 1v8j by Molmil
The Crystal Structure of the Minimal Functional Domain of the Microtubule Destabilizer KIF2C Complexed with Mg-ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF2C, MAGNESIUM ION
Authors:Ogawa, T, Nitta, R, Okada, Y, Hirokawa, N.
Deposit date:2004-01-09
Release date:2004-03-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:A common mechanism for microtubule destabilizers-M type kinesins stabilize curling of the protofilament using the class-specific neck and loops.
Cell(Cambridge,Mass.), 116, 2004
1V8K
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BU of 1v8k by Molmil
The Crystal Structure of the Minimal Functional Domain of the Microtubule Destabilizer KIF2C Complexed with Mg-AMPPNP
Descriptor: Kinesin-like protein KIF2C, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Ogawa, T, Nitta, R, Okada, Y, Hirokawa, N.
Deposit date:2004-01-09
Release date:2004-03-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A common mechanism for microtubule destabilizers-M type kinesins stabilize curling of the protofilament using the class-specific neck and loops.
Cell(Cambridge,Mass.), 116, 2004
5XJA
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The Crystal Structure of the Minimal Core Domain of the Microtubule Depolymerizer KIF2C Complexed with ADP-Mg-AlFx
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Kinesin-like protein KIF2C, ...
Authors:Ogawa, T, Jiang, X, Hirokawa, N.
Deposit date:2017-04-30
Release date:2017-09-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.43 Å)
Cite:Mechanism of Catalytic Microtubule Depolymerization via KIF2-Tubulin Transitional Conformation
Cell Rep, 20, 2017
5XJB
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The Crystal Structure of the Minimal Core Domain of the Microtubule Depolymerizer KIF2C Complexed with ADP-Mg-BeFx
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Kinesin-like protein KIF2C, ...
Authors:Ogawa, T, Jiang, X, Hirokawa, N.
Deposit date:2017-04-30
Release date:2017-09-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Mechanism of Catalytic Microtubule Depolymerization via KIF2-Tubulin Transitional Conformation
Cell Rep, 20, 2017
3VQJ
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BU of 3vqj by Molmil
Crystal Structutre of Thiobacillus thioparus THI115 Carbonyl Sulfide Hydrolase
Descriptor: Carbonyl sulfide hydrolase, SODIUM ION, ZINC ION
Authors:Katayama, Y, Noguchi, K, Ogawa, T, Ohtaki, A, Odaka, M, Yohda, M.
Deposit date:2012-03-24
Release date:2013-02-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Carbonyl Sulfide Hydrolase from Thiobacillus thioparus Strain THI115 Is One of the beta-Carbonic Anhydrase Family Enzymes
J.Am.Chem.Soc., 135, 2013
3VRK
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Crystal Structutre of Thiobacillus thioparus THI115 Carbonyl Sulfide Hydrolase / Thiocyanate complex
Descriptor: Carbonyl sulfide hydrolase, SODIUM ION, THIOCYANATE ION, ...
Authors:Katayama, Y, Noguchi, K, Ogawa, T, Ohtaki, A, Odaka, M, Yohda, M.
Deposit date:2012-04-11
Release date:2013-02-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Carbonyl Sulfide Hydrolase from Thiobacillus thioparus Strain THI115 Is One of the beta-Carbonic Anhydrase Family Enzymes
J.Am.Chem.Soc., 135, 2013
7EOB
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BU of 7eob by Molmil
Crystal structure of KIF1A Motor-Neck domain E239K mutant with ADP-Mg-AlFx
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Kinesin-like protein KIF1A, ...
Authors:Ogawa, T, Jiang, X, Hirokawa, N.
Deposit date:2021-04-21
Release date:2021-12-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:A neuropathy-associated kinesin KIF1A mutation hyper-stabilizes the motor-neck interaction during the ATPase cycle.
Embo J., 41, 2022
7EO9
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BU of 7eo9 by Molmil
Crystal structure of KIF1A Motor-Neck domain with ADP-Mg-AlFx
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Kinesin-like protein KIF1A, ...
Authors:Ogawa, T, Jiang, X, Hirokawa, N.
Deposit date:2021-04-21
Release date:2021-12-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:A neuropathy-associated kinesin KIF1A mutation hyper-stabilizes the motor-neck interaction during the ATPase cycle.
Embo J., 41, 2022
8W7P
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BU of 8w7p by Molmil
Extracellular domain of a sensor histidine kinase
Descriptor: Extracellular domain of a sensor histidine kinase NagS, GLYCEROL
Authors:Itoh, T, Ogawa, T, Hibi, T, Kimoto, H.
Deposit date:2023-08-31
Release date:2024-01-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Characterization of the extracellular domain of sensor histidine kinase NagS from Paenibacillus sp. str. FPU-7: nagS interacts with oligosaccharide binding protein NagB1 in complexes with N, N'-diacetylchitobiose.
Biosci.Biotechnol.Biochem., 88, 2024
1C1F
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BU of 1c1f by Molmil
LIGAND-FREE CONGERIN I
Descriptor: PROTEIN (CONGERIN I)
Authors:Shirai, T, Mitsuyama, C, Niwa, Y, Matsui, Y, Hotta, H, Yamane, T, Kamiya, H, Ishii, C, Ogawa, T, Muramoto, K.
Deposit date:1999-03-03
Release date:1999-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-resolution structure of the conger eel galectin, congerin I, in lactose-liganded and ligand-free forms: emergence of a new structure class by accelerated evolution.
Structure Fold.Des., 7, 1999
1C1L
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BU of 1c1l by Molmil
LACTOSE-LIGANDED CONGERIN I
Descriptor: PROTEIN (CONGERIN I), beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Shirai, T, Mitsuyama, C, Niwa, Y, Matsui, Y, Hotta, H, Yamane, T, Kamiya, H, Ishii, C, Ogawa, T, Muramoto, K.
Deposit date:1999-03-03
Release date:1999-10-08
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High-resolution structure of the conger eel galectin, congerin I, in lactose-liganded and ligand-free forms: emergence of a new structure class by accelerated evolution.
Structure Fold.Des., 7, 1999
1IS4
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BU of 1is4 by Molmil
LACTOSE-LIGANDED CONGERIN II
Descriptor: CONGERIN II, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Shirai, T, Matsui, Y, Shionyu-Mitsuyama, C, Yamane, T, Kamiya, H, Ishii, C, Ogawa, T, Muramoto, K.
Deposit date:2001-11-12
Release date:2002-09-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of a Conger Eel Galectin (Congerin II) at 1.45 A Resolution: Implication for the Accelerated Evolution of a New Ligand-Binding Site Following Gene Duplication
J.Mol.Biol., 321, 2002
1IS3
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BU of 1is3 by Molmil
LACTOSE AND MES-LIGANDED CONGERIN II
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CONGERIN II, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Shirai, T, Matsui, Y, Shionyu-Mitsuyama, C, Yamane, T, Kamiya, H, Ishii, C, Ogawa, T, Muramoto, K.
Deposit date:2001-11-12
Release date:2002-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of a conger eel galectin (congerin II) at 1.45 A resolution: Implication for the accelerated evolution of a new ligand-binding site following gene duplication
J.MOL.BIOL., 321, 2002
1IS5
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BU of 1is5 by Molmil
Ligand free Congerin II
Descriptor: Congerin II
Authors:Shirai, T, Matsui, Y, Shionyu-Mitsuyama, C, Yamane, T, Kamiya, H, Ishii, C, Ogawa, T, Muramoto, K.
Deposit date:2001-11-12
Release date:2002-09-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a conger eel galectin (congerin II) at 1.45 A resolution: Implication for the accelerated evolution of a new ligand-binding site following gene duplication
J.MOL.BIOL., 321, 2002
1IS6
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BU of 1is6 by Molmil
MES-Liganded Congerin II
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Congerin II
Authors:Shirai, T, Matsui, Y, Shionyu-Mitsuyama, C, Yamane, T, Kamiya, H, Ishii, C, Ogawa, T, Muramoto, K.
Deposit date:2001-11-12
Release date:2002-09-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a conger eel galectin (congerin II) at 1.45 A resolution: Implication for the accelerated evolution of a new ligand-binding site following gene duplication
J.MOL.BIOL., 321, 2002
2ZX0
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BU of 2zx0 by Molmil
Rhamnose-binding lectin CSL3
Descriptor: CSL3, GLYCEROL, PHOSPHATE ION
Authors:Shirai, T, Watababe, Y, Lee, M, Ogawa, T, Muramoto, K.
Deposit date:2008-12-19
Release date:2009-06-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of rhamnose-binding lectin CSL3: unique pseudo-tetrameric architecture of a pattern recognition protein
J.Mol.Biol., 391, 2009
2ZX2
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BU of 2zx2 by Molmil
Rhamnose-binding lectin CSL3
Descriptor: CSL3, PHOSPHATE ION, alpha-L-rhamnopyranose
Authors:Shirai, T, Watababe, Y, Lee, M, Ogawa, T, Muramoto, K.
Deposit date:2008-12-19
Release date:2009-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of rhamnose-binding lectin CSL3: unique pseudo-tetrameric architecture of a pattern recognition protein
J.Mol.Biol., 391, 2009
2ZX1
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BU of 2zx1 by Molmil
Rhamnose-binding lectin CSL3
Descriptor: CSL3, PHOSPHATE ION
Authors:Shirai, T, Watababe, Y, Lee, M, Ogawa, T, Muramoto, K.
Deposit date:2008-12-19
Release date:2009-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of rhamnose-binding lectin CSL3: unique pseudo-tetrameric architecture of a pattern recognition protein
J.Mol.Biol., 391, 2009
2DFX
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BU of 2dfx by Molmil
Crystal structure of the carboxy terminal domain of colicin E5 complexed with its inhibitor
Descriptor: Colicin-E5, Colicin-E5 immunity protein
Authors:Yajima, S, Inoue, S, Ogawa, T, Nonaka, T, Ohsawa, K, Masaki, H.
Deposit date:2006-03-06
Release date:2007-01-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for sequence-dependent recognition of colicin E5 tRNase by mimicking the mRNA-tRNA interaction
Nucleic Acids Res., 34, 2006
2DJH
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Crystal structure of the carboxy-terminal ribonuclease domain of Colicin E5
Descriptor: 2'-DEOXYURIDINE 3'-MONOPHOSPHATE, 2-AMINO-9-(2-DEOXY-3-O-PHOSPHONOPENTOFURANOSYL)-1,9-DIHYDRO-6H-PURIN-6-ONE, Colicin-E5
Authors:Yajima, S, Inoue, S, Ogawa, T, Nonaka, T, Ohsawa, K, Masaki, H.
Deposit date:2006-04-03
Release date:2007-01-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for sequence-dependent recognition of colicin E5 tRNase by mimicking the mRNA-tRNA interaction
Nucleic Acids Res., 34, 2006
6JVB
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BU of 6jvb by Molmil
Crystal Structure of Human CRMP2 1-532, AGE-modified
Descriptor: Dihydropyrimidinase-related protein 2
Authors:Jiang, X, Ogawa, T, Hirokawa, N.
Deposit date:2019-04-16
Release date:2019-10-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Enhanced carbonyl stress induces irreversible multimerization of CRMP2 in schizophrenia pathogenesis.
Life Sci Alliance, 2, 2019
6JV9
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Crystal Structure of Human CRMP2 1-532, unmodified
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Dihydropyrimidinase-related protein 2, ...
Authors:Jiang, X, Ogawa, T, Hirokawa, N.
Deposit date:2019-04-16
Release date:2019-10-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Enhanced carbonyl stress induces irreversible multimerization of CRMP2 in schizophrenia pathogenesis.
Life Sci Alliance, 2, 2019
2ZX4
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BU of 2zx4 by Molmil
Rhamnose-binding lectin CSL3
Descriptor: CSL3, PHOSPHATE ION, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, ...
Authors:Shirai, T, Watababe, Y, Lee, M, Ogawa, T, Muramoto, K.
Deposit date:2008-12-19
Release date:2009-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of rhamnose-binding lectin CSL3: unique pseudo-tetrameric architecture of a pattern recognition protein
J.Mol.Biol., 391, 2009
2ZX3
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Rhamnose-binding lectin CSL3
Descriptor: CSL3, PHOSPHATE ION, alpha-D-galactopyranose-(1-6)-beta-D-glucopyranose
Authors:Shirai, T, Watababe, Y, Lee, M, Ogawa, T, Muramoto, K.
Deposit date:2008-12-19
Release date:2009-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of rhamnose-binding lectin CSL3: unique pseudo-tetrameric architecture of a pattern recognition protein
J.Mol.Biol., 391, 2009
3AJY
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Crystal Structure of Ancestral Congerin Con-anc
Descriptor: Ancestral congerin Con-anc, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Konno, A, Kitagawa, A, Watanabe, M, Ogawa, T, Shirai, T.
Deposit date:2010-06-29
Release date:2011-05-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Tracing protein evolution through ancestral structures of fish galectin
Structure, 19, 2011

 

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