Author results

4G6F
  • Download 4g6f
  • View 4g6f
Molmil generated image of 4g6f
CRYSTAL STRUCTURE OF 10E8 FAB IN COMPLEX WITH AN HIV-1 GP41 PEPTIDE
Descriptor:10E8 Heavy Chain, 10E8 Light Chain, gp41 MPER Peptide
Authors:Ofek, G., Huang, J., Connors, M., Kwong, P.D.
Deposit date:2012-07-19
Release date:2012-09-26
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Broad and potent neutralization of HIV-1 by a gp41-specific human antibody.
Nature, 491, 2012
4V9R
  • Download 4v9r
  • View 4v9r
Molmil generated image of 4v9r
CRYSTAL STRUCTURE OF ANTIBIOTIC DITYROMYCIN BOUND TO 70S RIBOSOME
Descriptor:16S Ribosomal RNA, 30S Ribosomal Protein S2, 30S Ribosomal Protein S3, ...
Authors:Bulkley, D.P., Brandi, L., Polikanov, Y.S., Fabbretti, A., O'Connor, M., Gualerzi, C.O., Steitz, T.A.
Deposit date:2013-12-05
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:The antibiotics dityromycin and GE82832 bind protein S12 and block EF-G-catalyzed translocation.
Cell Rep, 6, 2014
4V9S
  • Download 4v9s
  • View 4v9s
Molmil generated image of 4v9s
CRYSTAL STRUCTURE OF ANTIBIOTIC GE82832 BOUND TO 70S RIBOSOME
Descriptor:16S Ribosomal RNA, 30S Ribosomal Protein S2, 30S Ribosomal Protein S3, ...
Authors:Bulkley, D.P., Brandi, L., Polikanov, Y.S., Fabbretti, A., O'Connor, M., Gualerzi, C.O., Steitz, T.A.
Deposit date:2013-12-05
Release date:2014-07-09
Last modified:2018-06-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The antibiotics dityromycin and GE82832 bind protein S12 and block EF-G-catalyzed translocation.
Cell Rep, 6, 2014
1HP3
  • Download 1hp3
  • View 1hp3
Molmil generated image of 1hp3
C-TERMINAL TRUNCATION OF OMEGA-ATRACOTOXIN-HV2A (CT-HV2A)
Descriptor:OMEGA-ATRACOTOXIN-HV2A
Authors:Wang, X.-H., King, G.F.
Deposit date:2000-12-12
Release date:2002-12-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Discovery and structure of a potent and highly specific blocker of insect calcium channels
J.Biol.Chem., 276, 2001
1DL0
  • Download 1dl0
  • View 1dl0
Molmil generated image of 1dl0
SOLUTION STRUCTURE OF THE INSECTICIDAL NEUROTOXIN J-ATRACOTOXIN-HV1C
Descriptor:J-ATRACOTOXIN-HV1C
Authors:Wang, X.H., King, G.F.
Deposit date:1999-12-08
Release date:2000-09-15
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Discovery and characterization of a family of insecticidal neurotoxins with a rare vicinal disulfide bridge.
Nat.Struct.Biol., 7, 2000
1AXH
  • Download 1axh
  • View 1axh
Molmil generated image of 1axh
ATRACOTOXIN-HVI FROM HADRONYCHE VERSUTA (AUSTRALIAN FUNNEL-WEB SPIDER, NMR, 20 STRUCTURES
Descriptor:ATRACOTOXIN-HVI
Authors:Fletcher, J.I., O'Donoghue, S.I., Nilges, M., King, G.F.
Deposit date:1996-11-04
Release date:1997-11-12
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:The structure of a novel insecticidal neurotoxin, omega-atracotoxin-HV1, from the venom of an Australian funnel web spider.
Nat.Struct.Biol., 4, 1997
3SE8
  • Download 3se8
  • View 3se8
Molmil generated image of 3se8
CRYSTAL STRUCTURE OF BROADLY AND POTENTLY NEUTRALIZING ANTIBODY VRC03 IN COMPLEX WITH HIV-1 GP120
Descriptor:HIV-1 Clade AE strain 93TH057 gp120, Heavy chain of antibody VRC03, Light chain of antibody VRC03, ...
Authors:Kwong, P.D., Zhou, T.
Deposit date:2011-06-10
Release date:2011-08-10
Last modified:2012-08-15
Method:X-RAY DIFFRACTION (1.895 Å)
Cite:Focused evolution of HIV-1 neutralizing antibodies revealed by structures and deep sequencing.
Science, 333, 2011
3SE9
  • Download 3se9
  • View 3se9
Molmil generated image of 3se9
CRYSTAL STRUCTURE OF BROADLY AND POTENTLY NEUTRALIZING ANTIBODY VRC-PG04 IN COMPLEX WITH HIV-1 GP120
Descriptor:HIV-1 Clade AE strain 93TH057 gp120, Heavy chain of antibody VRC-PG04, Light chain of antibody VRC-PG04, ...
Authors:Kwong, P.D., Zhou, T.
Deposit date:2011-06-10
Release date:2011-08-10
Last modified:2011-10-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Focused evolution of HIV-1 neutralizing antibodies revealed by structures and deep sequencing.
Science, 333, 2011
4J6R
  • Download 4j6r
  • View 4j6r
Molmil generated image of 4j6r
CRYSTAL STRUCTURE OF BROADLY AND POTENTLY NEUTRALIZING ANTIBODY VRC23 IN COMPLEX WITH HIV-1 GP120
Descriptor:Envelope glycoprotein gp160, HEAVY CHAIN OF ANTIBODY VRC23, LIGHT CHAIN OF ANTIBODY VRC23, ...
Authors:Zhou, T., Moquin, S., Kwong, P.D.
Deposit date:2013-02-11
Release date:2013-05-08
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Delineating antibody recognition in polyclonal sera from patterns of HIV-1 isolate neutralization.
Science, 340, 2013
4JB9
  • Download 4jb9
  • View 4jb9
Molmil generated image of 4jb9
CRYSTAL STRUCTURE OF ANTIBODY VRC06 IN COMPLEX WITH HIV-1 GP120 CORE
Descriptor:clade A/E 93TH057 HIV-1 gp120 core, antibody VRC06 heavy chain, antibody VRC06 light chain, ...
Authors:Kwon, Y.D., Zhou, T., Srivatsan, S., Kwong, P.D.
Deposit date:2013-02-19
Release date:2013-05-08
Last modified:2016-10-19
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Delineating antibody recognition in polyclonal sera from patterns of HIV-1 isolate neutralization.
Science, 340, 2013
4LSP
  • Download 4lsp
  • View 4lsp
Molmil generated image of 4lsp
CRYSTAL STRUCTURE OF BROADLY AND POTENTLY NEUTRALIZING ANTIBODY VRC-CH31 IN COMPLEX WITH HIV-1 CLADE A/E GP120 93TH057
Descriptor:HIV-1 CLADE A/E STRAIN 93TH057 GP120, HEAVY CHAIN OF ANTIBODY VRC-CH31, LIGHT CHAIN OF ANTIBODY VRC-CH31, ...
Authors:Zhou, T., Moquin, S., Kwong, P.D.
Deposit date:2013-07-23
Release date:2013-09-04
Last modified:2014-05-07
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Multidonor Analysis Reveals Structural Elements, Genetic Determinants, and Maturation Pathway for HIV-1 Neutralization by VRC01-Class Antibodies.
Immunity, 39, 2013
4LSQ
  • Download 4lsq
  • View 4lsq
Molmil generated image of 4lsq
CRYSTAL STRUCTURE OF BROADLY AND POTENTLY NEUTRALIZING ANTIBODY VRC-CH31 IN COMPLEX WITH HIV-1 CLADE A/E GP120 93TH057 WITH LOOP D AND LOOP V5 FROM CLADE A STRAIN 3415_V1_C1
Descriptor:ENVELOPE GLYCOPROTEIN GP120 WITH LOOP D AND V5 FROM STRAIN 3415_V1_C1, HEAVY CHAIN OF ANTIBODY VRC-CH31, LIGHT CHAIN OF ANTIBODY VRC-CH31 WITH N70D MUTATION, ...
Authors:Zhou, T., Moquin, S., Kwong, P.D.
Deposit date:2013-07-23
Release date:2013-08-21
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Multidonor Analysis Reveals Structural Elements, Genetic Determinants, and Maturation Pathway for HIV-1 Neutralization by VRC01-Class Antibodies.
Immunity, 39, 2013
4LSR
  • Download 4lsr
  • View 4lsr
Molmil generated image of 4lsr
CRYSTAL STRUCTURE OF BROADLY AND POTENTLY NEUTRALIZING ANTIBODY VRC-CH31 IN COMPLEX WITH HIV-1 CLADE A/E STRAN 93TH057 GP120 WITH LOOP D AND LOOP V5 FROM CLADE A STRAIN KER_2018_11
Descriptor:ENVELOPE GLYCOPROTEIN GP120 WITH LOOP D AND V5 FROM STRAIN ker_2018_11, HEAVY CHAIN OF ANTIBODY VRC-CH31, LIGHT CHAIN OF ANTIBODY VRC-CH31 (N70D MUTATION), ...
Authors:Zhou, T., Moquin, S., Kwong, P.D.
Deposit date:2013-07-23
Release date:2013-08-21
Last modified:2014-05-07
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Multidonor Analysis Reveals Structural Elements, Genetic Determinants, and Maturation Pathway for HIV-1 Neutralization by VRC01-Class Antibodies.
Immunity, 39, 2013
4LSS
  • Download 4lss
  • View 4lss
Molmil generated image of 4lss
CRYSTAL STRUCTURE OF BROADLY AND POTENTLY NEUTRALIZING ANTIBODY VRC01 IN COMPLEX WITH HIV-1 CLADE A STRAIN KER_2018_11 GP120
Descriptor:envelope glycoprotein GP120, HEAVY CHAIN OF ANTIBODY VRC01, LIGHT CHAIN OF ANTIBODY VRC01 with N72T mutation, ...
Authors:Zhou, T., Moquin, S., Kwong, P.D.
Deposit date:2013-07-23
Release date:2013-08-21
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Multidonor Analysis Reveals Structural Elements, Genetic Determinants, and Maturation Pathway for HIV-1 Neutralization by VRC01-Class Antibodies.
Immunity, 39, 2013
4LST
  • Download 4lst
  • View 4lst
Molmil generated image of 4lst
CRYSTAL STRUCTURE OF BROADLY AND POTENTLY NEUTRALIZING ANTIBODY VRC01 IN COMPLEX WITH HIV-1 CLADE C STRAIN ZM176.66 GP120
Descriptor:ENVELOPE GLYCOPROTEIN GP120 of HIV-1 clade C, HEAVY CHAIN OF ANTIBODY VRC01, LIGHT CHAIN OF ANTIBODY VRC01, ...
Authors:Zhou, T., Moquin, S., Kwong, P.D.
Deposit date:2013-07-23
Release date:2013-08-21
Last modified:2014-05-07
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Multidonor Analysis Reveals Structural Elements, Genetic Determinants, and Maturation Pathway for HIV-1 Neutralization by VRC01-Class Antibodies.
Immunity, 39, 2013
4LSU
  • Download 4lsu
  • View 4lsu
Molmil generated image of 4lsu
CRYSTAL STRUCTURE OF BROADLY AND POTENTLY NEUTRALIZING ANTIBODY VRC-PG20 IN COMPLEX WITH HIV-1 CLADE A/E 93TH057 GP120
Descriptor:HIV-1 CLADE A/E STRAIN 93TH057 GP120, HEAVY CHAIN OF ANTIBODY VRC-PG20, LIGHT CHAIN OF ANTIBODY VRC-PG20, ...
Authors:Zhou, T., Moquin, S., Kwong, P.D.
Deposit date:2013-07-23
Release date:2013-08-21
Last modified:2014-05-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Multidonor Analysis Reveals Structural Elements, Genetic Determinants, and Maturation Pathway for HIV-1 Neutralization by VRC01-Class Antibodies.
Immunity, 39, 2013
4LSV
  • Download 4lsv
  • View 4lsv
Molmil generated image of 4lsv
CRYSTAL STRUCTURE OF BROADLY AND POTENTLY NEUTRALIZING ANTIBODY 3BNC117 IN COMPLEX WITH HIV-1 CLADE C C1086 GP120
Descriptor:envelope glycoprotein GP120, HEAVY CHAIN OF ANTIBODY 3BNC117, LIGHT CHAIN OF ANTIBODY 3BNC117, ...
Authors:Zhou, T., Moquin, S., Kwong, P.D.
Deposit date:2013-07-23
Release date:2013-08-21
Last modified:2014-05-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Multidonor Analysis Reveals Structural Elements, Genetic Determinants, and Maturation Pathway for HIV-1 Neutralization by VRC01-Class Antibodies.
Immunity, 39, 2013
4TOY
  • Download 4toy
  • View 4toy
Molmil generated image of 4toy
STRUCTURE OF 35O22 FAB, A HIV-1 NEUTRALIZING ANTIBODY
Descriptor:35O22 Fab Heavy chain, 35O22 Fab Light chain
Authors:Pancera, M., Kwong, P.D.
Deposit date:2014-06-06
Release date:2014-09-03
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Broad and potent HIV-1 neutralization by a human antibody that binds the gp41-gp120 interface.
Nature, 515, 2014
4TVP
  • Download 4tvp
  • View 4tvp
Molmil generated image of 4tvp
CRYSTAL STRUCTURE OF THE HIV-1 BG505 SOSIP.664 ENV TRIMER ECTODOMAIN, COMPRISING ATOMIC-LEVEL DEFINITION OF PRE-FUSION GP120 AND GP41, IN COMPLEX WITH HUMAN ANTIBODIES PGT122 AND 35O22
Descriptor:Envelope glycoprotein gp160, PGT122 Light chain, PGT122 Heavy chain, ...
Authors:Pancera, M., Zhou, T., Kwong, P.D.
Deposit date:2014-06-27
Release date:2014-10-08
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure and immune recognition of trimeric pre-fusion HIV-1 Env.
Nature, 514, 2014
5EWI
  • Download 5ewi
  • View 5ewi
Molmil generated image of 5ewi
CRYSTAL STRUCTURE OF THE HUMAN FAB VRC38.01, AN HIV-1 V1V2-DIRECTED NEUTRALIZING ANTIBODY ISOLATED FROM DONOR N90
Descriptor:VRC38.01 Heavy Chain, VRC38.01 Light Chain
Authors:Gorman, J., Kwong, P.D.
Deposit date:2015-11-20
Release date:2016-11-23
Last modified:2017-05-31
Method:X-RAY DIFFRACTION (1.5996 Å)
Cite:Virus-like Particles Identify an HIV V1V2 Apex-Binding Neutralizing Antibody that Lacks a Protruding Loop.
Immunity, 46, 2017
5FYJ
  • Download 5fyj
  • View 5fyj
Molmil generated image of 5fyj
CRYSTAL STRUCTURE AT 3.4 A RESOLUTION OF FULLY GLYCOSYLATED HIV-1 CLADE G X1193.C1 SOSIP.664 PREFUSION ENV TRIMER IN COMPLEX WITH BROADLY NEUTRALIZING ANTIBODIES PGT122, 35O22 AND VRC01
Descriptor:GP41 ENV ECTODOMAIN, 35O22, GP120 ENV ECTODOMAIN, ...
Authors:Stewart-Jones, G.B.E., Zhou, T., Thomas, P.V., Kwong, P.D.
Deposit date:2016-03-08
Release date:2016-04-27
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Trimeric HIV-1-Env Structures Define Glycan Shields from Clades A, B and G
Cell(Cambridge,Mass.), 165, 2016
5FYK
  • Download 5fyk
  • View 5fyk
Molmil generated image of 5fyk
CRYSTAL STRUCTURE AT 3.7 A RESOLUTION OF FULLY GLYCOSYLATED HIV-1 CLADE B JR-FL SOSIP.664 PREFUSION ENV TRIMER IN COMPLEX WITH BROADLY NEUTRALIZING ANTIBODIES PGT122, 35O22 AND VRC01
Descriptor:JR-FL, GP41 ENV ECTODOMAIN, 35O22, ...
Authors:Stewart-Jones, G.B.E., Zhou, T., Thomas, P.V., Kwong, P.D.
Deposit date:2016-03-08
Release date:2016-04-27
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (3.107 Å)
Cite:Trimeric HIV-1-Env Structures Define Glycan Shields from Clades A, B and G
Cell(Cambridge,Mass.), 165, 2016
5FYL
  • Download 5fyl
  • View 5fyl
Molmil generated image of 5fyl
CRYSTAL STRUCTURE AT 3.7 A RESOLUTION OF FULLY GLYCOSYLATED HIV-1 CLADE A BG505 SOSIP.664 PREFUSION ENV TRIMER IN COMPLEX WITH BROADLY NEUTRALIZING ANTIBODIES PGT122 AND 35O22
Descriptor:BG505 GP120 ENV ECTODOMAIN, 35O22 ANTIBODY FAB HEAVY CHAIN, 35O22 ANTIBODY FAB LIGHT CHAIN, ...
Authors:Stewart-Jones, G.B.E., Zhou, T., Thomas, P.V., Kwong, P.D.
Deposit date:2016-03-08
Release date:2016-04-27
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Trimeric HIV-1-Env Structures Define Glycan Shields from Clades A, B and G
Cell(Cambridge,Mass.), 165, 2016
5IQ7
  • Download 5iq7
  • View 5iq7
Molmil generated image of 5iq7
CRYSTAL STRUCTURE OF 10E8-S74W FAB IN COMPLEX WITH AN HIV-1 GP41 PEPTIDE.
Descriptor:10E8-S74W Heavy Chain, 10E8-S74W Light Chain, gp41 MPER peptide
Authors:Ofek, G., Kwon, Y.D., Caruso, W., Kwong, P.D.
Deposit date:2016-03-10
Release date:2016-04-20
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (3.2869 Å)
Cite:Optimization of the Solubility of HIV-1-Neutralizing Antibody 10E8 through Somatic Variation and Structure-Based Design.
J.Virol., 90, 2016
5IQ9
  • Download 5iq9
  • View 5iq9
Molmil generated image of 5iq9
CRYSTAL STRUCTURE OF 10E8V4 FAB IN COMPLEX WITH AN HIV-1 GP41 PEPTIDE.
Descriptor:10E8v4 Heavy Chain, 10E8v4 Light Chain, gp41 MPER peptide
Authors:Ofek, G., Kwon, Y.D., Caruso, W., Kwong, P.D.
Deposit date:2016-03-10
Release date:2016-04-20
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Optimization of the Solubility of HIV-1-Neutralizing Antibody 10E8 through Somatic Variation and Structure-Based Design.
J.Virol., 90, 2016
<123>
PDBj@FacebookPDBj@TwitterwwPDBwwPDB Foundation

Copyright © 2013-2019 Protein Data Bank Japan