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5N9J
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BU of 5n9j by Molmil
Core Mediator of transcriptional regulation
Descriptor: Mediator Complex Subunit 9, Mediator of RNA polymerase II transcription subunit 10, Mediator of RNA polymerase II transcription subunit 11, ...
Authors:Nozawa, K, Schneider, T.R, Cramer, P.
Deposit date:2017-02-25
Release date:2017-05-17
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Core Mediator structure at 3.4 Angstrom extends model of transcription initiation complex.
Nature, 545, 2017
3VWA
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BU of 3vwa by Molmil
Crystal structure of Cex1p
Descriptor: Cytoplasmic export protein 1
Authors:Nozawa, K, Ishitani, R, Nureki, O.
Deposit date:2012-08-13
Release date:2013-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Cex1p reveals the mechanism of tRNA trafficking between nucleus and cytoplasm
Nucleic Acids Res., 41, 2013
7X58
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BU of 7x58 by Molmil
Cryo-EM structure of human subnucleosome (open form)
Descriptor: Histone H3.1, Histone H4, Widom601 DNA FW (145-MER), ...
Authors:Nozawa, K, Takizawa, Y, Kurumizaka, H.
Deposit date:2022-03-04
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (3.93 Å)
Cite:Cryo-electron microscopy structure of the H3-H4 octasome: A nucleosome-like particle without histones H2A and H2B.
Proc.Natl.Acad.Sci.USA, 119, 2022
7X57
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BU of 7x57 by Molmil
Cryo-EM structure of human subnucleosome (closed form)
Descriptor: Histone H3.1, Histone H4, Widom601 DNA FW (145-MER), ...
Authors:Nozawa, K, Takizawa, Y, Kurumizaka, H.
Deposit date:2022-03-04
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (3.63 Å)
Cite:Cryo-electron microscopy structure of the H3-H4 octasome: A nucleosome-like particle without histones H2A and H2B.
Proc.Natl.Acad.Sci.USA, 119, 2022
7YOZ
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BU of 7yoz by Molmil
Cryo-EM structure of human subnucleosome (intermediate form)
Descriptor: Histone H3.1, Histone H4, Widom601 DNA FW (145-MER), ...
Authors:Nozawa, K, Takizawa, Y, Kurumizaka, H.
Deposit date:2022-08-02
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryo-electron microscopy structure of the H3-H4 octasome: A nucleosome-like particle without histones H2A and H2B.
Proc.Natl.Acad.Sci.USA, 119, 2022
2ZNI
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BU of 2zni by Molmil
Crystal structure of Pyrrolysyl-tRNA synthetase-tRNA(Pyl) complex from Desulfitobacterium hafniense
Descriptor: CALCIUM ION, Pyrrolysyl-tRNA synthetase, bacterial tRNA
Authors:Nozawa, K, Araiso, Y, Soll, D, Ishitani, R, Nureki, O.
Deposit date:2008-04-25
Release date:2008-12-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Pyrrolysyl-tRNA synthetase-tRNA(Pyl) structure reveals the molecular basis of orthogonality
Nature, 457, 2009
2ZNJ
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BU of 2znj by Molmil
Crystal structure of Pyrrolysyl-tRNA synthetase from Desulfitobacterium hafniense
Descriptor: Putative uncharacterized protein
Authors:Nozawa, K, Araiso, Y, Soll, D, Ishitani, R, Nureki, O.
Deposit date:2008-04-25
Release date:2008-12-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Pyrrolysyl-tRNA synthetase-tRNA(Pyl) structure reveals the molecular basis of orthogonality
Nature, 457, 2009
8IHL
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BU of 8ihl by Molmil
Overlapping tri-nucleosome
Descriptor: DNA (353-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Nishimura, M, Fujii, T, Tanaka, H, Maehara, K, Nozawa, K, Takizawa, Y, Ohkawa, Y, Kurumizaka, H.
Deposit date:2023-02-23
Release date:2024-01-17
Last modified:2024-01-24
Method:ELECTRON MICROSCOPY (7.64 Å)
Cite:Genome-wide mapping and cryo-EM structural analyses of the overlapping tri-nucleosome composed of hexasome-hexasome-octasome moieties.
Commun Biol, 7, 2024
7XZX
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BU of 7xzx by Molmil
Cryo-EM structure of the nucleosome in complex with p53 DNA-binding domain
Descriptor: Cellular tumor antigen p53, DNA (193-MER), Histone H2A type 1-B/E, ...
Authors:Nishimura, M, Nozawa, K, Takizawa, Y, Kurumizaka, H.
Deposit date:2022-06-03
Release date:2022-10-12
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (4.53 Å)
Cite:Structural basis for p53 binding to its nucleosomal target DNA sequence.
Pnas Nexus, 1, 2022
7XZZ
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BU of 7xzz by Molmil
Cryo-EM structure of the nucleosome in complex with p53
Descriptor: Cellular tumor antigen p53, DNA (169-MER), Histone H2A type 1-B/E, ...
Authors:Nishimura, M, Nozawa, K, Takizawa, Y, Kurumizaka, H.
Deposit date:2022-06-03
Release date:2022-10-12
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (4.07 Å)
Cite:Structural basis for p53 binding to its nucleosomal target DNA sequence.
Pnas Nexus, 1, 2022
7XZY
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BU of 7xzy by Molmil
Cryo-EM structure of the nucleosome containing 193 base-pair DNA with a p53 target sequence
Descriptor: DNA (193-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Nishimura, M, Nozawa, K, Takizawa, Y, Kurumizaka, H.
Deposit date:2022-06-03
Release date:2022-10-19
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (3.97 Å)
Cite:Structural basis for p53 binding to its nucleosomal target DNA sequence.
Pnas Nexus, 1, 2022
7Y00
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BU of 7y00 by Molmil
Cryo-EM structure of the nucleosome containing 169 base-pair DNA with a p53 target sequence
Descriptor: DNA (169-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Nishimura, M, Nozawa, K, Takizawa, Y, Kurumizaka, H.
Deposit date:2022-06-03
Release date:2022-10-19
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (3.96 Å)
Cite:Structural basis for p53 binding to its nucleosomal target DNA sequence.
Pnas Nexus, 1, 2022
2Z5H
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BU of 2z5h by Molmil
Crystal structure of the head-to-tail junction of tropomyosin complexed with a fragment of TnT
Descriptor: General control protein GCN4 and Tropomyosin alpha-1 chain, Tropomyosin alpha-1 chain and General control protein GCN4, Troponin T, ...
Authors:Murakami, K, Nozawa, K, Tomii, K, Kudou, N, Igarashi, N, Shirakihara, Y, Wakatsuki, S, Stewart, M, Yasunaga, T, Wakabayashi, T.
Deposit date:2007-07-12
Release date:2008-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural basis for tropomyosin overlap in thin (actin) filaments and the generation of a molecular swivel by troponin-T
Proc.Natl.Acad.Sci.USA, 105, 2008
2Z5I
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BU of 2z5i by Molmil
Crystal structure of the head-to-tail junction of tropomyosin
Descriptor: General control protein GCN4 and Tropomyosin alpha-1 chain, MAGNESIUM ION, Tropomyosin alpha-1 chain and General control protein GCN4
Authors:Murakami, K, Nozawa, K, Tomii, K, Kudou, N, Igarashi, N, Shirakihara, Y, Wakatsuki, S, Stewart, M, Yasunaga, T, Wakabayashi, T.
Deposit date:2007-07-12
Release date:2008-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for tropomyosin overlap in thin (actin) filaments and the generation of a molecular swivel by troponin-T
Proc.Natl.Acad.Sci.USA, 105, 2008
7DV6
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BU of 7dv6 by Molmil
Discovery of Functionally Selective Transforming Growth Factor beta Type II Receptor (TGF-beta RII) Inhibitors as Anti-Fibrosis Agents
Descriptor: 5-[(3S)-5,5-dimethyloxolan-3-yl]-6-methoxy-3-(2-methoxypyridin-4-yl)pyrazolo[1,5-a]pyrimidine, TGF-beta receptor type-2
Authors:Nishihata, J, Nomura, A, Miwa, S, Doi, S, Adachi, T.
Deposit date:2021-01-12
Release date:2021-06-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Discovery of Selective Transforming Growth Factor beta Type II Receptor Inhibitors as Antifibrosis Agents.
Acs Med.Chem.Lett., 12, 2021

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