Author results

1AT5
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HEN EGG WHITE LYSOZYME WITH A SUCCINIMIDE RESIDUE
分子名称:LYSOZYME, N-ACETYL-D-GLUCOSAMINE, SODIUM ION, ...
著者Noguchi, S., Miyawaki, K., Satow, Y.
登録日1997-08-18
公開日1998-02-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Succinimide and isoaspartate residues in the crystal structures of hen egg-white lysozyme complexed with tri-N-acetylchitotriose.
J.Mol.Biol., 278, 1998
1AT6
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HEN EGG WHITE LYSOZYME WITH A ISOASPARTATE RESIDUE
分子名称:LYSOZYME, N-ACETYL-D-GLUCOSAMINE
著者Noguchi, S., Miyawaki, K., Satow, Y.
登録日1997-08-19
公開日1998-02-25
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Succinimide and isoaspartate residues in the crystal structures of hen egg-white lysozyme complexed with tri-N-acetylchitotriose.
J.Mol.Biol., 278, 1998
1RTU
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USTILAGO SPHAEROGENA RIBONUCLEASE U2
分子名称:RIBONUCLEASE U2, SULFATE ION
著者Noguchi, S., Satow, Y., Uchida, T., Sasaki, C., Matsuzaki, T.
登録日1995-05-12
公開日1996-11-08
最終更新日2018-04-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Ustilago sphaerogena ribonuclease U2 at 1.8 A resolution.
Biochemistry, 34, 1995
3AGN
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CRYSTAL STRUCTURE OF USTILAGO SPHAEROGENA RIBONUCLEASE U2 COMPLEXED WITH ADENOSINE 3'-MONOPHOSPHATE
分子名称:Ribonuclease U2, [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate, CALCIUM ION
著者Noguchi, S.
登録日2010-04-03
公開日2010-07-07
最終更新日2012-04-04
実験手法X-RAY DIFFRACTION (0.96 Å)
主引用文献Isomerization mechanism of aspartate to isoaspartate implied by structures of Ustilago sphaerogena ribonuclease U2 complexed with adenosine 3'-monophosphate
Acta Crystallogr.,Sect.D, 66, 2010
3AGO
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CRYSTAL STRUCTURE OF USTILAGO SPHAEROGENA RIBONUCLEASE U2 COMPLEXED WITH ADENOSINE 3'-MONOPHOSPHATE
分子名称:Ribonuclease U2, [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate, CALCIUM ION, ...
著者Noguchi, S.
登録日2010-04-03
公開日2010-07-07
最終更新日2012-04-04
実験手法X-RAY DIFFRACTION (0.99 Å)
主引用文献Isomerization mechanism of aspartate to isoaspartate implied by structures of Ustilago sphaerogena ribonuclease U2 complexed with adenosine 3'-monophosphate
Acta Crystallogr.,Sect.D, 66, 2010
3AHS
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CRYSTAL STRUCTURE OF USTILAGO SPHAEROGENA RIBONUCLEASE U2B
分子名称:Ribonuclease U2, PHOSPHATE ION, POTASSIUM ION, ...
著者Noguchi, S.
登録日2010-04-29
公開日2010-07-07
最終更新日2011-07-27
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Structural changes induced by the deamidation and isomerization of asparagine revealed by the crystal structure of Ustilago sphaerogena ribonuclease U2B
Biopolymers, 93, 2010
3AHW
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CRYSTAL STRUCTURE OF USTILAGO SPHAEROGENA RIBONUCLEASE U2 COMPLEXED WITH ADENOSINE 2'-MONOPHOSPHATE
分子名称:Ribonuclease U2, ADENOSINE-2'-MONOPHOSPHATE, CALCIUM ION
著者Noguchi, S.
登録日2010-05-04
公開日2010-07-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献Conformational variation revealed by the crystal structure of RNase U2A complexed with Ca Ion and 2'-adenylic acid at 1.03A resolution
Protein Pept.Lett., 17, 2010
1A0F
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CRYSTAL STRUCTURE OF GLUTATHIONE S-TRANSFERASE FROM ESCHERICHIA COLI COMPLEXED WITH GLUTATHIONESULFONIC ACID
分子名称:GLUTATHIONE S-TRANSFERASE, GLUTATHIONE SULFONIC ACID
著者Nishida, M., Harada, S., Noguchi, S., Inoue, H., Takahashi, K., Satow, Y.
登録日1997-11-29
公開日1999-01-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Three-dimensional structure of Escherichia coli glutathione S-transferase complexed with glutathione sulfonate: catalytic roles of Cys10 and His106.
J.Mol.Biol., 281, 1998
2D17
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SOLUTION RNA STRUCTURE OF STEM-BULGE-STEM REGION OF THE HIV-1 DIMERIZATION INITIATION SITE
分子名称:5'-R(*CP*GP*GP*CP*AP*AP*GP*AP*GP*GP*CP*GP*AP*CP*CP*C)-3', 5'-R(*GP*GP*GP*UP*CP*GP*GP*CP*UP*UP*GP*CP*UP*G)-3'
著者Baba, S., Takahashi, K., Noguchi, S., Takaku, H., Koyanagi, Y., Yamamoto, N., Kawai, G.
登録日2005-08-15
公開日2005-11-01
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138, 2005
2D18
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SOLUTION RNA STRUCTURE OF LOOP REGION OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE EXTENDED-DUPLEX DIMER
分子名称:5'-R(*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*GP*GP*C)-3'
著者Baba, S., Takahashi, K., Noguchi, S., Takaku, H., Koyanagi, Y., Yamamoto, N., Kawai, G.
登録日2005-08-15
公開日2005-11-01
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138, 2005
2D19
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SOLUTION RNA STRUCTURE OF LOOP REGION OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE KISSING-LOOP DIMER
分子名称:5'-R(*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*GP*GP*C)-3'
著者Baba, S., Takahashi, K., Noguchi, S., Takaku, H., Koyanagi, Y., Yamamoto, N., Kawai, G.
登録日2005-08-15
公開日2005-11-01
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138, 2005
2D1A
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SOLUTION RNA STRUCTURE MODEL OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE EXTENDED-DUPLEX DIMER
分子名称:RNA
著者Baba, S., Takahashi, K., Noguchi, S., Takaku, H., Koyanagi, Y., Yamamoto, N., Kawai, G.
登録日2005-08-15
公開日2005-11-01
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138, 2005
2D1B
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SOLUTION RNA STRUCTURE MODEL OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE KISSING-LOOP DIMER
分子名称:RNA
著者Baba, S., Takahashi, K., Noguchi, S., Takaku, H., Koyanagi, Y., Yamamoto, N., Kawai, G.
登録日2005-08-15
公開日2005-11-01
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138, 2005
3AK8
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CRYSTAL STRUCTURE OF THE SEP22 DODECAMER, A DPS-LIKE PROTEIN FROM SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR ENTERITIDIS
分子名称:DNA protection during starvation protein, SULFATE ION, MAGNESIUM ION
著者Miyamoto, T., Asahina, Y., Miyazaki, S., Shimizu, H., Ohto, U., Noguchi, S., Satow, Y.
登録日2010-07-08
公開日2011-01-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structures of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis
Acta Crystallogr.,Sect.F, 67, 2011
3AK9
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CRYSTAL STRUCTURE OF THE SEP22 DODECAMER, A DPS-LIKE PROTEIN FROM SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR ENTERITIDIS, FE-SOAKED FORM
分子名称:DNA protection during starvation protein, FE (II) ION, SULFATE ION, ...
著者Miyamoto, T., Asahina, Y., Miyazaki, S., Shimizu, H., Ohto, U., Noguchi, S., Satow, Y.
登録日2010-07-08
公開日2011-01-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structures of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis
Acta Crystallogr.,Sect.F, 67, 2011
3AGX
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CRYSTAL STRUCTURE OF HUMAN HSP40 HDJ1 PEPTIDE-BINDING DOMAIN
分子名称:DnaJ homolog subfamily B member 1
著者Suzuki, H., Noguchi, S., Satow, Y.
登録日2010-04-12
公開日2011-02-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Peptide-binding sites as revealed by the crystal structures of the human Hsp40 Hdj1 C-terminal domain in complex with the octapeptide from human Hsp70
Biochemistry, 49, 2010
3AGY
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CRYSTAL STRUCTURE OF HUMAN HSP40 HDJ1 PEPTIDE-BINDING DOMAIN COMPLEXED WITH A C-TERMINAL PEPTIDE OF HSP70
分子名称:DnaJ homolog subfamily B member 1, peptide of Heat shock cognate 71 kDa protein
著者Suzuki, H., Noguchi, S., Satow, Y.
登録日2010-04-12
公開日2011-02-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Peptide-binding sites as revealed by the crystal structures of the human Hsp40 Hdj1 C-terminal domain in complex with the octapeptide from human Hsp70
Biochemistry, 49, 2010
3AGZ
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CRYSTAL STRUCTURE OF HUMAN HSP40 HDJ1 PEPTIDE-BINDING DOMAIN COMPLEXED WITH A C-TERMINAL PEPTIDE OF HSP70
分子名称:DnaJ homolog subfamily B member 1, peptide of Heat shock cognate 71 kDa protein
著者Suzuki, H., Noguchi, S., Satow, Y.
登録日2010-04-12
公開日2011-02-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Peptide-binding sites as revealed by the crystal structures of the human Hsp40 Hdj1 C-terminal domain in complex with the octapeptide from human Hsp70
Biochemistry, 49, 2010
3VPK
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CRYSTAL STRUCTURE OF 6-GUANIDINOHEXANOYL TRYPSIN
分子名称:Cationic trypsin, 6-carbamimidamidohexanoic acid, CALCIUM ION, ...
著者Masuda, Y., Nitanai, Y., Mizutani, R., Noguchi, S.
登録日2012-03-05
公開日2012-05-23
最終更新日2013-02-06
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of 6-guanidinohexanoyl trypsin near the optimum pH reveals the acyl-enzyme intermediate to be deacylated
Proteins, 2012
6IDG
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ANTIBODY 64M-5 FAB IN COMPLEX WITH DT(6-4)T
分子名称:Anti-(6-4) photoproduct antibody 64M-5 Fab (light chain), Anti-(6-4) photoproduct antibody 64M-5 Fab (heavy chain), DNA (5'-D(*(64T)P*(5PY))-3')
著者Yokoyama, H., Mizutani, R., Noguchi, S., Hayashida, N.
登録日2018-09-10
公開日2019-02-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of the antibody 64M-5 Fab and its complex with dT(6-4)T indicate induced-fit and high-affinity mechanisms
Acta Crystallogr.,Sect.F, 75, 2019
6IDH
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ANTIBODY 64M-5 FAB IN LIGAND-FREE FORM
分子名称:Anti-(6-4) photoproduct antibody 64M-5 Fab (light chain), Anti-(6-4) photoproduct antibody 64M-5 Fab (heavy chain)
著者Yokoyama, H., Mizutani, R., Noguchi, S., Hayashida, N.
登録日2018-09-10
公開日2019-02-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of the antibody 64M-5 Fab and its complex with dT(6-4)T indicate induced-fit and high-affinity mechanisms
Acta Crystallogr.,Sect.F, 75, 2019
3SIC
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MOLECULAR RECOGNITION AT THE ACTIVE SITE OF SUBTILISIN BPN': CRYSTALLOGRAPHIC STUDIES USING GENETICALLY ENGINEERED PROTEINACEOUS INHIBITOR SSI (STREPTOMYCES SUBTILISIN INHIBITOR)
分子名称:SUBTILISIN BPN', STREPTOMYCES SUBTILISIN INHIBITOR (SSI), CALCIUM ION
著者Mitsui, Y., Takeuchi, Y., Nakamura, K.T.
登録日1991-08-30
公開日1994-01-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular recognition at the active site of subtilisin BPN': crystallographic studies using genetically engineered proteinaceous inhibitor SSI (Streptomyces subtilisin inhibitor).
Protein Eng., 4, 1991
5SIC
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MOLECULAR RECOGNITION AT THE ACTIVE SITE OF SUBTILISIN BPN': CRYSTALLOGRAPHIC STUDIES USING GENETICALLY ENGINEERED PROTEINACEOUS INHIBITOR SSI (STREPTOMYCES SUBTILISIN INHIBITOR)
分子名称:SUBTILISIN BPN', SUBTILISIN INHIBITOR (SSI), CALCIUM ION
著者Mitsui, Y., Takeuchi, Y., Nakamura, K.T.
登録日1991-11-18
公開日1994-01-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Molecular recognition at the active site of subtilisin BPN': crystallographic studies using genetically engineered proteinaceous inhibitor SSI (Streptomyces subtilisin inhibitor).
Protein Eng., 4, 1991
3SSI
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PROTEINASE INHIBITOR SSI (STREPTOMYCES SUBTILISIN, INHIBITOR) FROM STREPTOMYCES ALBOGRISEOLUS
分子名称:STREPTOMYCES SUBTILISIN INHIBITOR
著者Suzuki, T., Nonaka, T., Mitsui, Y.
登録日1996-03-01
公開日1996-08-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Modulation of the Protein Proteinase Inhibitor Ssi (Streptomyces Subtilisin Inhibitor)
To be Published
4Q21
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MOLECULAR SWITCH FOR SIGNAL TRANSDUCTION: STRUCTURAL DIFFERENCES BETWEEN ACTIVE AND INACTIVE FORMS OF PROTOONCOGENIC RAS PROTEINS
分子名称:C-H-RAS P21 PROTEIN CATALYTIC DOMAIN, MAGNESIUM ION, GUANOSINE-5'-DIPHOSPHATE
著者Kim, S.-H.
登録日1991-09-25
公開日1992-07-15
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular switch for signal transduction: structural differences between active and inactive forms of protooncogenic ras proteins.
Science, 247, 1990
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