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4YTZ
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BU of 4ytz by Molmil
Rat xanthine oxidoreductase, C-terminal deletion protein variant, crystal grown without dithiothreitol
Descriptor: BICARBONATE ION, CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Nishino, T, Okamoto, K, Kawaguchi, Y, Matsumura, T, Eger, B.T, Pai, E.F, Nishino, T.
Deposit date:2015-03-18
Release date:2015-04-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The C-terminal peptide plays a role in the formation of an intermediate form during the transition between xanthine dehydrogenase and xanthine oxidase
Febs J., 282, 2015
4YTY
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BU of 4yty by Molmil
Structure of rat xanthine oxidoreductase, C535A/C992R/C1324S, NADH bound form
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, BICARBONATE ION, CALCIUM ION, ...
Authors:Nishino, T, Okamoto, K, Kawaguchi, Y, Matsumura, T, Eger, B.T, Pai, E.F.
Deposit date:2015-03-18
Release date:2015-04-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The C-terminal peptide plays a role in the formation of an intermediate form during the transition between xanthine dehydrogenase and xanthine oxidase.
Febs J., 282, 2015
4YSW
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BU of 4ysw by Molmil
Structure of rat xanthine oxidoreductase, C-terminal deletion protein variant, NADH bound form
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, BICARBONATE ION, CALCIUM ION, ...
Authors:Nishino, T, Okamoto, K, Kawaguchi, Y, Matsumura, T, Eger, B.T, Pai, E.F.
Deposit date:2015-03-17
Release date:2015-04-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The C-terminal peptide plays a role in the formation of an intermediate form during the transition between xanthine dehydrogenase and xanthine oxidase.
Febs J., 282, 2015
1D8L
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BU of 1d8l by Molmil
E. COLI HOLLIDAY JUNCTION BINDING PROTEIN RUVA NH2 REGION LACKING DOMAIN III
Descriptor: PROTEIN (HOLLIDAY JUNCTION DNA HELICASE RUVA)
Authors:Nishino, T, Iwasaki, H, Kataoka, M, Ariyoshi, M, Fujita, T, Shinagawa, H, Morikawa, K.
Deposit date:1999-10-25
Release date:2000-05-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Modulation of RuvB function by the mobile domain III of the Holliday junction recognition protein RuvA.
J.Mol.Biol., 298, 2000
1WYG
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BU of 1wyg by Molmil
Crystal Structure of a Rat Xanthine Dehydrogenase Triple Mutant (C535A, C992R and C1324S)
Descriptor: 2-HYDROXYBENZOIC ACID, ACETIC ACID, CALCIUM ION, ...
Authors:Nishino, T, Okamoto, K, Kawaguchi, Y, Hori, H, Matsumura, T, Eger, B.T, Pai, E.F, Nishino, T.
Deposit date:2005-02-14
Release date:2005-05-31
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Mechanism of the Conversion of Xanthine Dehydrogenase to Xanthine Oxidase: IDENTIFICATION OF THE TWO CYSTEINE DISULFIDE BONDS AND CRYSTAL STRUCTURE OF A NON-CONVERTIBLE RAT LIVER XANTHINE DEHYDROGENASE MUTANT
J.Biol.Chem., 280, 2005
1GEF
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BU of 1gef by Molmil
Crystal structure of the archaeal holliday junction resolvase HJC
Descriptor: HOLLIDAY JUNCTION RESOLVASE, SULFATE ION
Authors:Nishino, T, Komori, K, Tsuchiya, D, Ishino, Y, Morikawa, K.
Deposit date:2000-11-08
Release date:2001-03-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the archaeal holliday junction resolvase Hjc and implications for DNA recognition.
Structure, 9, 2001
1IPI
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BU of 1ipi by Molmil
CRYSTAL STRUCTURE OF THE ARCHAEAL HOLLIDAY JUNCTION RESOLVASE HJC FROM PYROCOCCUS FURIOSUS FORM II
Descriptor: HOLLIDAY JUNCTION RESOLVASE
Authors:Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
Deposit date:2001-05-15
Release date:2001-11-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Dissection of the regional roles of the archaeal Holliday junction resolvase Hjc by structural and mutational analyses.
J.Biol.Chem., 276, 2001
3B0D
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BU of 3b0d by Molmil
Crystal structure of the chicken CENP-T histone fold/CENP-W complex, crystal form II
Descriptor: CITRIC ACID, Centromere protein T, Centromere protein W
Authors:Nishino, T, Takeuchi, K, Gascoigne, K.E, Suzuki, A, Hori, T, Oyama, T, Morikawa, K, Cheeseman, I.M, Fukagawa, T.
Deposit date:2011-06-08
Release date:2012-03-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.197 Å)
Cite:CENP-T-W-S-X Forms a Unique Centromeric Chromatin Structure with a Histone-like Fold.
Cell(Cambridge,Mass.), 148, 2012
3B0C
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BU of 3b0c by Molmil
Crystal structure of the chicken CENP-T histone fold/CENP-W complex, crystal form I
Descriptor: CITRIC ACID, Centromere protein T, Centromere protein W
Authors:Nishino, T, Takeuchi, K, Gascoigne, K.E, Suzuki, A, Hori, T, Oyama, T, Morikawa, K, Cheeseman, I.M, Fukagawa, T.
Deposit date:2011-06-08
Release date:2012-03-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:CENP-T-W-S-X Forms a Unique Centromeric Chromatin Structure with a Histone-like Fold.
Cell(Cambridge,Mass.), 148, 2012
1HJP
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BU of 1hjp by Molmil
HOLLIDAY JUNCTION BINDING PROTEIN RUVA FROM E. COLI
Descriptor: RUVA
Authors:Nishino, T, Ariyoshi, M, Iwasaki, H, Shinagawa, H, Morikawa, K.
Deposit date:1997-08-21
Release date:1998-02-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Functional Analyses of the Domain Structure in the Holliday Junction Binding Protein Ruva
Structure, 6, 1998
3B0B
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BU of 3b0b by Molmil
Crystal structure of the chicken CENP-S/CENP-X complex
Descriptor: Centromere protein S, Centromere protein X
Authors:Nishino, T, Takeuchi, K, Gascoigne, K.E, Suzuki, A, Hori, T, Oyama, T, Morikawa, K, Cheeseman, I.M, Fukagawa, T.
Deposit date:2011-06-08
Release date:2012-03-07
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:CENP-T-W-S-X Forms a Unique Centromeric Chromatin Structure with a Histone-like Fold.
Cell(Cambridge,Mass.), 148, 2012
1J23
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BU of 1j23 by Molmil
Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain
Descriptor: ATP-dependent RNA helicase, putative
Authors:Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
Deposit date:2002-12-25
Release date:2003-04-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Structure, 11, 2003
1J25
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BU of 1j25 by Molmil
Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, Mn cocrystal
Descriptor: ATP-dependent RNA helicase, putative, MANGANESE (II) ION
Authors:Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
Deposit date:2002-12-25
Release date:2003-04-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Structure, 11, 2003
1J24
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BU of 1j24 by Molmil
Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, Ca cocrystal
Descriptor: ATP-dependent RNA helicase, putative, CALCIUM ION
Authors:Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
Deposit date:2002-12-25
Release date:2003-04-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Structure, 11, 2003
1J22
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BU of 1j22 by Molmil
Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, selenomet derivative
Descriptor: ATP-dependent RNA helicase, putative
Authors:Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
Deposit date:2002-12-25
Release date:2003-04-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Structure, 11, 2003
3VH6
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BU of 3vh6 by Molmil
Crystal structure of the chicken CENP-T histone fold/CENP-W/CENP-S/CENP-X heterotetrameric complex, crystal form II
Descriptor: CENP-S, CENP-T, CENP-W, ...
Authors:Nishino, T, Takeuchi, K, Gascoigne, K.E, Suzuki, A, Hori, T, Oyama, T, Morikawa, K, Cheeseman, I.M, Fukagawa, T.
Deposit date:2011-08-23
Release date:2012-03-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.351 Å)
Cite:CENP-T-W-S-X Forms a Unique Centromeric Chromatin Structure with a Histone-like Fold
Cell(Cambridge,Mass.), 148, 2012
3VH5
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BU of 3vh5 by Molmil
Crystal structure of the chicken CENP-T histone fold/CENP-W/CENP-S/CENP-X heterotetrameric complex, crystal form I
Descriptor: CENP-S, CENP-T, CENP-W, ...
Authors:Nishino, T, Takeuchi, K, Gascoigne, K.E, Suzuki, A, Hori, T, Oyama, T, Morikawa, K, Cheeseman, I.M, Fukagawa, T.
Deposit date:2011-08-23
Release date:2012-03-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.402 Å)
Cite:CENP-T-W-S-X Forms a Unique Centromeric Chromatin Structure with a Histone-like Fold
Cell(Cambridge,Mass.), 148, 2012
3VZ9
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BU of 3vz9 by Molmil
Crystal structure of the chicken Spc24-Spc25 globular domain
Descriptor: Spc24 protein, Uncharacterized protein
Authors:Nishino, T, Fukagawa, T.
Deposit date:2012-10-09
Release date:2013-04-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:CENP-T provides a structural platform for outer kinetochore assembly
Embo J., 32, 2013
3VZA
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BU of 3vza by Molmil
Crystal structure of the chicken Spc24-Spc25 globular domain in complex with CENP-T peptide
Descriptor: Centromere protein T, Spc24 protein, Uncharacterized protein
Authors:Nishino, T, Fukagawa, T.
Deposit date:2012-10-09
Release date:2013-04-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:CENP-T provides a structural platform for outer kinetochore assembly
Embo J., 32, 2013
1WP9
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BU of 1wp9 by Molmil
Crystal structure of Pyrococcus furiosus Hef helicase domain
Descriptor: ATP-dependent RNA helicase, putative, PHOSPHATE ION
Authors:Nishino, T, Komori, K, Tsuchiya, D, Ishino, Y, Morikawa, K.
Deposit date:2004-08-31
Release date:2005-02-01
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure and Functional Implications of Pyrococcus furiosus Hef Helicase Domain Involved in Branched DNA Processing
Structure, 13, 2005
1X2I
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BU of 1x2i by Molmil
Crystal Structure Of Archaeal Xpf/Mus81 Homolog, Hef From Pyrococcus Furiosus, Helix-hairpin-helix Domain
Descriptor: Hef helicase/nuclease
Authors:Nishino, T, Komori, K, Ishino, Y, Morikawa, K.
Deposit date:2005-04-24
Release date:2005-09-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural and Functional Analyses of an Archaeal XPF/Rad1/Mus81 Nuclease: Asymmetric DNA Binding and Cleavage Mechanisms
STRUCTURE, 13, 2005
7DA2
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BU of 7da2 by Molmil
The crystal structure of the chicken FANCM-MHF complex
Descriptor: Centromere protein S, Centromere protein X, Fanconi anemia group M protein
Authors:Nishino, T, Ito, S.
Deposit date:2020-10-14
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural analysis of the chicken FANCM-MHF complex and its stability.
Acta Crystallogr.,Sect.F, 77, 2021
1C7Y
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BU of 1c7y by Molmil
E.COLI RUVA-HOLLIDAY JUNCTION COMPLEX
Descriptor: DNA (5'-D(P*DAP*DAP*DGP*DTP*DTP*DGP*DGP*DGP*DAP*DTP*DTP*DGP*DT)-3'), DNA (5'-D(P*DCP*DAP*DAP*DTP*DCP*DCP*DCP*DAP*DAP*DCP*DTP*DT)-3'), DNA (5'-D(P*DCP*DGP*DAP*DAP*DTP*DGP*DTP*DGP*DTP*DGP*DTP*DCP*DT)-3'), ...
Authors:Ariyoshi, M, Nishino, T, Iwasaki, H, Shinagawa, H, Morikawa, K.
Deposit date:2000-04-03
Release date:2000-07-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the holliday junction DNA in complex with a single RuvA tetramer.
Proc.Natl.Acad.Sci.USA, 97, 2000
1FO4
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BU of 1fo4 by Molmil
CRYSTAL STRUCTURE OF XANTHINE DEHYDROGENASE ISOLATED FROM BOVINE MILK
Descriptor: 2-HYDROXYBENZOIC ACID, CALCIUM ION, DIOXOTHIOMOLYBDENUM(VI) ION, ...
Authors:Enroth, C, Eger, B.T, Okamoto, K, Nishino, T, Nishino, T, Pai, E.F.
Deposit date:2000-08-24
Release date:2000-10-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of bovine milk xanthine dehydrogenase and xanthine oxidase: structure-based mechanism of conversion.
Proc.Natl.Acad.Sci.USA, 97, 2000
1FIQ
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BU of 1fiq by Molmil
CRYSTAL STRUCTURE OF XANTHINE OXIDASE FROM BOVINE MILK
Descriptor: 2-HYDROXYBENZOIC ACID, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Enroth, C, Eger, B.T, Okamoto, K, Nishino, T, Nishino, T, Pai, E.F.
Deposit date:2000-08-04
Release date:2000-10-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of bovine milk xanthine dehydrogenase and xanthine oxidase: structure-based mechanism of conversion.
Proc.Natl.Acad.Sci.USA, 97, 2000

 

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