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4WVC
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BU of 4wvc by Molmil
Crystal structure of GH63 mannosylglycerate hydrolase from Thermus thermophilus HB8 in complex with Tris and D-glycerate
Descriptor: (2R)-2,3-DIHYDROXYPROPANOIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
Authors:Miyazaki, T, Ichikawa, M, Nishikawa, A, Tonozuka, T.
Deposit date:2014-11-05
Release date:2015-03-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure and substrate-binding mode of GH63 mannosylglycerate hydrolase from Thermus thermophilus HB8.
J.Struct.Biol., 190, 2015
4WVA
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BU of 4wva by Molmil
Crystal structure of GH63 mannosylglycerate hydrolase from Thermus thermophilus HB8 in complex with Tris
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
Authors:Miyazaki, T, Ichikawa, M, Nishikawa, A, Tonozuka, T.
Deposit date:2014-11-05
Release date:2015-03-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Crystal structure and substrate-binding mode of GH63 mannosylglycerate hydrolase from Thermus thermophilus HB8.
J.Struct.Biol., 190, 2015
4WVB
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BU of 4wvb by Molmil
Crystal structure of GH63 mannosylglycerate hydrolase from Thermus thermophilus HB8 in complex with glucose
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Uncharacterized protein, ...
Authors:Miyazaki, T, Ichikawa, M, Nishikawa, A, Tonozuka, T.
Deposit date:2014-11-05
Release date:2015-03-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure and substrate-binding mode of GH63 mannosylglycerate hydrolase from Thermus thermophilus HB8.
J.Struct.Biol., 190, 2015
4EN6
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BU of 4en6 by Molmil
Crystal structure of HA70 (HA3) subcomponent of Clostridium botulinum type C progenitor toxin in complex with alpha 2-3-sialyllactose
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Hemagglutinin components HA-22/23/53, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Yamashita, S, Yoshida, H, Tonozuka, T, Nishikawa, A, Kamitori, S.
Deposit date:2012-04-12
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides
Febs Lett., 586, 2012
4EN7
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BU of 4en7 by Molmil
Crystal structure of HA70 (HA3) subcomponent of Clostridium botulinum type C progenitor toxin in complex with alpha 2-3-sialyllactosamine
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Hemagglutinin components HA-22/23/53, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Yamashita, S, Yoshida, H, Tonozuka, T, Nishikawa, A, Kamitori, S.
Deposit date:2012-04-12
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides
Febs Lett., 586, 2012
4EN8
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BU of 4en8 by Molmil
Crystal structure of HA70 (HA3) subcomponent of Clostridium botulinum type C progenitor toxin in complex with alpha 2-6-sialyllactose
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Hemagglutinin components HA-22/23/53, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Yamashita, S, Yoshida, H, Tonozuka, T, Nishikawa, A, Kamitori, S.
Deposit date:2012-04-12
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides
Febs Lett., 586, 2012
4EN9
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BU of 4en9 by Molmil
Crystal structure of HA70 (HA3) subcomponent of Clostridium botulinum type C progenitor toxin in complex with alpha 2-6-sialyllactosamine
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Hemagglutinin components HA-22/23/53, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Yamashita, S, Yoshida, H, Tonozuka, T, Nishikawa, A, Kamitori, S.
Deposit date:2012-04-12
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides
Febs Lett., 586, 2012
2Z8G
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BU of 2z8g by Molmil
Aspergillus niger ATCC9642 isopullulanase complexed with isopanose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Isopullulanase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-6)-beta-D-glucopyranose
Authors:Mizuno, M, Koide, A, Yamamura, A, Akeboshi, H, Yoshida, H, Kamitori, S, Sakano, Y, Nishikawa, A, Tonozuka, T.
Deposit date:2007-09-05
Release date:2007-12-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Aspergillus niger Isopullulanase, a Member of Glycoside Hydrolase Family 49
J.Mol.Biol., 376, 2008
2ZS6
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BU of 2zs6 by Molmil
HA3 subcomponent of botulinum type C progenitor toxin
Descriptor: Hemagglutinin components HA3
Authors:Nakamura, T, Tonozuka, T, Kotani, M, Oguma, K, Nishikawa, A.
Deposit date:2008-09-02
Release date:2008-09-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the HA3 Subcomponent of Clostridium botulinum Type C Progenitor Toxin
J.Mol.Biol., 385, 2009
3AH4
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BU of 3ah4 by Molmil
HA1 subcomponent of botulinum type C progenitor toxin complexed with galactose
Descriptor: Main hemagglutinin component, beta-D-galactopyranose
Authors:Nakamura, T, Tonozuka, T, Ide, A, Yuzawa, T, Oguma, K, Nishikawa, A.
Deposit date:2010-04-13
Release date:2010-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Sugar-binding sites of the HA1 subcomponent of Clostridium botulinum type C progenitor toxin
J.Mol.Biol., 376, 2008
3AH2
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BU of 3ah2 by Molmil
HA1 subcomponent of botulinum type C progenitor toxin complexed with N-acetylgalactosamine
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, Main hemagglutinin component
Authors:Nakamura, T, Tonozuka, T, Ide, A, Yuzawa, T, Oguma, K, Nishikawa, A.
Deposit date:2010-04-13
Release date:2010-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Sugar-binding sites of the HA1 subcomponent of Clostridium botulinum type C progenitor toxin
J.Mol.Biol., 376, 2008
3AH1
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BU of 3ah1 by Molmil
HA1 subcomponent of botulinum type C progenitor toxin complexed with N-acetylneuramic acid
Descriptor: Main hemagglutinin component, N-acetyl-beta-neuraminic acid
Authors:Nakamura, T, Tonozuka, T, Ide, A, Yuzawa, T, Oguma, K, Nishikawa, A.
Deposit date:2010-04-13
Release date:2010-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Sugar-binding sites of the HA1 subcomponent of Clostridium botulinum type C progenitor toxin
J.Mol.Biol., 376, 2008
4XPO
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BU of 4xpo by Molmil
Crystal structure of a novel alpha-galactosidase from Pedobacter saltans
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha-glucosidase
Authors:Miyazaki, T, Ishizaki, Y, Ichikawa, M, Nishikawa, A, Tonozuka, T.
Deposit date:2015-01-17
Release date:2015-05-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and biochemical characterization of novel bacterial alpha-galactosidases belonging to glycoside hydrolase family 31
Biochem.J., 469, 2015
4XPR
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BU of 4xpr by Molmil
Crystal structure of the mutant D365A of Pedobacter saltans GH31 alpha-galactosidase
Descriptor: 1,2-ETHANEDIOL, Alpha-glucosidase
Authors:Miyazaki, T, Ishizaki, Y, Ichikawa, M, Nishikawa, A, Tonozuka, T.
Deposit date:2015-01-17
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural and biochemical characterization of novel bacterial alpha-galactosidases belonging to glycoside hydrolase family 31
Biochem.J., 469, 2015
4XPP
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BU of 4xpp by Molmil
Crystal structure of Pedobacter saltans GH31 alpha-galactosidase complexed with D-galactose
Descriptor: 1,2-ETHANEDIOL, Alpha-glucosidase, beta-D-galactopyranose
Authors:Miyazaki, T, Ishizaki, Y, Ichikawa, M, Nishikawa, A, Tonozuka, T.
Deposit date:2015-01-17
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and biochemical characterization of novel bacterial alpha-galactosidases belonging to glycoside hydrolase family 31
Biochem.J., 469, 2015
4XPQ
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BU of 4xpq by Molmil
Crystal structure of Pedobacter saltans GH31 alpha-galactosidase complexed with L-fucose
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha-glucosidase, ...
Authors:Miyazaki, T, Ishizaki, Y, Ichikawa, M, Nishikawa, A, Tonozuka, T.
Deposit date:2015-01-17
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and biochemical characterization of novel bacterial alpha-galactosidases belonging to glycoside hydrolase family 31
Biochem.J., 469, 2015
4XPS
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BU of 4xps by Molmil
Crystal structure of the mutant D365A of Pedobacter saltans GH31 alpha-galactosidase complexed with p-nitrophenyl-alpha-galactopyranoside
Descriptor: 1,2-ETHANEDIOL, Alpha-glucosidase, P-NITROPHENOL, ...
Authors:Miyazaki, T, Ishizaki, Y, Ichikawa, M, Nishikawa, A, Tonozuka, T.
Deposit date:2015-01-17
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and biochemical characterization of novel bacterial alpha-galactosidases belonging to glycoside hydrolase family 31
Biochem.J., 469, 2015
2ZOE
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BU of 2zoe by Molmil
HA3 subcomponent of Clostridium botulinum type C progenitor toxin, complex with N-acetylneuramic acid
Descriptor: Hemagglutinin components HA3, N-acetyl-beta-neuraminic acid
Authors:Nakamura, T, Kotani, M, Tonozuka, T, Ide, A, Oguma, K, Nishikawa, A.
Deposit date:2008-05-09
Release date:2008-12-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the HA3 Subcomponent of Clostridium botulinum Type C Progenitor Toxin
J.Mol.Biol., 385, 2009
3D3I
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BU of 3d3i by Molmil
Crystal structural of Escherichia coli K12 YgjK, a glucosidase belonging to glycoside hydrolase family 63
Descriptor: CALCIUM ION, GLYCEROL, Uncharacterized protein ygjK
Authors:Kurakata, Y, Uechi, A, Yoshida, H, Kamitori, S, Sakano, Y, Nishikawa, A, Tonozuka, T.
Deposit date:2008-05-12
Release date:2008-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural insights into the substrate specificity and function of Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside hydrolase family 63.
J.Mol.Biol., 381, 2008
2ZYK
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BU of 2zyk by Molmil
Crystal structure of cyclo/maltodextrin-binding protein complexed with gamma-cyclodextrin
Descriptor: Cyclooctakis-(1-4)-(alpha-D-glucopyranose), Solute-binding protein
Authors:Tonozuka, T, Sogawa, A, Yamada, M, Matsumoto, N, Yoshida, H, Kamitori, S, Ichikawa, K, Mizuno, M, Nishikawa, A, Sakano, Y.
Deposit date:2009-01-26
Release date:2009-02-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for cyclodextrin recognition by Thermoactinomyces vulgaris cyclo/maltodextrin-binding protein
Febs J., 274, 2007
3AJ6
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BU of 3aj6 by Molmil
HA1 (HA33) mutant F179I of botulinum type C progenitor toxin complexed with N-acetylgalactosamine, bound at site II
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, Main hemagglutinin component
Authors:Nakamura, T, Tonozuka, T, Sato, R, Oguma, K, Nishikawa, A.
Deposit date:2010-05-24
Release date:2011-06-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Molecular diversity of the two sugar-binding sites of the beta-trefoil lectin HA33/C (HA1) from Clostridium botulinum type C neurotoxin
Arch.Biochem.Biophys., 512, 2011
3AJ5
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BU of 3aj5 by Molmil
HA1 (HA33) subcomponent of botulinum type C progenitor toxin complexed with N-acetylgalactosamine, bound at site II
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, Main hemagglutinin component
Authors:Nakamura, T, Tonozuka, T, Sato, R, Oguma, K, Nishikawa, A.
Deposit date:2010-05-24
Release date:2011-06-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular diversity of the two sugar-binding sites of the beta-trefoil lectin HA33/C (HA1) from Clostridium botulinum type C neurotoxin
Arch.Biochem.Biophys., 512, 2011
3A64
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BU of 3a64 by Molmil
Crystal structure of CcCel6C, a glycoside hydrolase family 6 enzyme, from Coprinopsis cinerea
Descriptor: Cellobiohydrolase, MAGNESIUM ION
Authors:Liu, Y, Yoshida, M, Kurakata, Y, Miyazaki, T, Nishikawa, A, Tonozuka, T.
Deposit date:2009-08-21
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a glycoside hydrolase family 6 enzyme, CcCel6C, a cellulase constitutively produced by Coprinopsis cinerea
Febs J., 277, 2010
3A9B
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BU of 3a9b by Molmil
CcCel6C, a glycoside hydrolase family 6 enzyme, complexed with cellobiose
Descriptor: Cellobiohydrolase, MAGNESIUM ION, beta-D-glucopyranose, ...
Authors:Liu, Y, Yoshida, M, Kurakata, Y, Miyazaki, T, Nishikawa, A, Tonozuka, T.
Deposit date:2009-10-22
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of a glycoside hydrolase family 6 enzyme, CcCel6C, a cellulase constitutively produced by Coprinopsis cinerea
Febs J., 277, 2010
3ABX
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BU of 3abx by Molmil
CcCel6C, a glycoside hydrolase family 6 enzyme, complexed with p-nitrophenyl beta-D-cellotrioside
Descriptor: 4-nitrophenyl beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranoside, Cellobiohydrolase, MAGNESIUM ION
Authors:Liu, Y, Yoshida, M, Kurakata, Y, Miyazaki, T, Nishikawa, A, Tonozuka, T.
Deposit date:2009-12-24
Release date:2010-01-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of a glycoside hydrolase family 6 enzyme, CcCel6C, a cellulase constitutively produced by Coprinopsis cinerea
Febs J., 277, 2010

 

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