Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8E0E
DownloadVisualize
BU of 8e0e by Molmil
nbF3:CaV beta subunit 2a complex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, GLYCEROL, ...
Authors:Nirwan, N, Minor, D.L.
Deposit date:2022-08-09
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Selective posttranslational inhibition of Ca V beta 1 -associated voltage-dependent calcium channels with a functionalized nanobody.
Nat Commun, 13, 2022
8DAM
DownloadVisualize
BU of 8dam by Molmil
nbF3:nbE8:CaV beta subunit 1b complex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Nanobody E8, SULFATE ION, ...
Authors:Nirwan, N, Minor, D.L.
Deposit date:2022-06-13
Release date:2022-12-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Selective posttranslational inhibition of Ca V beta 1 -associated voltage-dependent calcium channels with a functionalized nanobody.
Nat Commun, 13, 2022
6HZ6
DownloadVisualize
BU of 6hz6 by Molmil
Structure of McrBC without DNA binding domains (Class 2)
Descriptor: 5-methylcytosine-specific restriction enzyme B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Itoh, Y, Nirwan, N, Saikrishnan, K, Amunts, A.
Deposit date:2018-10-22
Release date:2019-07-24
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure-based mechanism for activation of the AAA+ GTPase McrB by the endonuclease McrC.
Nat Commun, 10, 2019
6HZ4
DownloadVisualize
BU of 6hz4 by Molmil
Structure of McrBC without DNA binding domains (one half of the full complex)
Descriptor: 5-methylcytosine-specific restriction enzyme B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Itoh, Y, Nirwan, N, Saikrishnan, K, Amunts, A.
Deposit date:2018-10-22
Release date:2019-07-24
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure-based mechanism for activation of the AAA+ GTPase McrB by the endonuclease McrC.
Nat Commun, 10, 2019
6HZ5
DownloadVisualize
BU of 6hz5 by Molmil
Structure of McrBC without DNA binding domains (Class 1)
Descriptor: 5-methylcytosine-specific restriction enzyme B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Itoh, Y, Nirwan, N, Saikrishnan, K, Amunts, A.
Deposit date:2018-10-22
Release date:2019-07-24
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure-based mechanism for activation of the AAA+ GTPase McrB by the endonuclease McrC.
Nat Commun, 10, 2019
6HZ8
DownloadVisualize
BU of 6hz8 by Molmil
Structure of McrBC without DNA binding domains (Class 4)
Descriptor: 5-methylcytosine-specific restriction enzyme B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Itoh, Y, Nirwan, N, Saikrishnan, K, Amunts, A.
Deposit date:2018-10-22
Release date:2019-07-24
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure-based mechanism for activation of the AAA+ GTPase McrB by the endonuclease McrC.
Nat Commun, 10, 2019
6HZ7
DownloadVisualize
BU of 6hz7 by Molmil
Structure of McrBC without DNA binding domains (Class 3)
Descriptor: 5-methylcytosine-specific restriction enzyme B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Itoh, Y, Nirwan, N, Saikrishnan, K, Amunts, A.
Deposit date:2018-10-22
Release date:2019-07-24
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure-based mechanism for activation of the AAA+ GTPase McrB by the endonuclease McrC.
Nat Commun, 10, 2019
6HZ9
DownloadVisualize
BU of 6hz9 by Molmil
Structure of McrBC without DNA binding domains (Class 5)
Descriptor: 5-methylcytosine-specific restriction enzyme B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Itoh, Y, Nirwan, N, Saikrishnan, K, Amunts, A.
Deposit date:2018-10-22
Release date:2019-07-24
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structure-based mechanism for activation of the AAA+ GTPase McrB by the endonuclease McrC.
Nat Commun, 10, 2019
5FFJ
DownloadVisualize
BU of 5ffj by Molmil
Structure of a nuclease-deletion mutant of the Type ISP restriction-modification enzyme LlaGI in complex with a DNA substrate mimic
Descriptor: DNA (5'-D(P*TP*AP*GP*CP*TP*AP*AP*TP*AP*GP*AP*CP*TP*GP*GP*AP*TP*GP*GP*AP*GP*G)-3'), DNA (5'-D(P*TP*CP*CP*TP*CP*CP*AP*TP*CP*CP*AP*GP*TP*CP*TP*AP*TP*TP*AP*GP*CP*T)-3'), Endonuclease and methylase LlaGI
Authors:Saikrishnan, K, Kulkarni, M, Nirwan, N.
Deposit date:2015-12-18
Release date:2016-03-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Structural insights into DNA sequence recognition by Type ISP restriction-modification enzymes
Nucleic Acids Res., 44, 2016
4XQK
DownloadVisualize
BU of 4xqk by Molmil
ATP-dependent Type ISP restriction-modification enzyme LlaBIII bound to DNA
Descriptor: DNA (28-MER), LlaBIII, POTASSIUM ION
Authors:Chand, M.K, Saikrishnan, K.
Deposit date:2015-01-19
Release date:2015-09-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Translocation-coupled DNA cleavage by the Type ISP restriction-modification enzymes
Nat.Chem.Biol., 11, 2015
7VSR
DownloadVisualize
BU of 7vsr by Molmil
Structure of McrBC (stalkless mutant)
Descriptor: 5-methylcytosine-specific restriction enzyme B, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Saikrishnan, K, Adhav, V.A, Bose, S, Kutti R, V.
Deposit date:2021-10-27
Release date:2023-02-15
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structure of McrBC (stalkless mutant)
To Be Published

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon