Author results

1LHS
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LOGGERHEAD SEA TURTLE MYOGLOBIN (AQUO-MET)
Descriptor:MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nardini, M., Tarricone, C., Lania, A., Desideri, A., De Sanctis, G., Coletta, M., Petruzzelli, R., Ascenzi, P., Coda, A., Bolognesi, M.
Deposit date:1995-02-01
Release date:1995-06-03
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Reptile heme protein structure: X-ray crystallographic study of the aquo-met and cyano-met derivatives of the loggerhead sea turtle (Caretta caretta) myoglobin at 2.0 A resolution.
J.Mol.Biol., 247, 1995
1LHT
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LOGGERHEAD SEA TURTLE MYOGLOBIN (CYANO-MET)
Descriptor:MYOGLOBIN, CYANIDE ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nardini, M., Tarricone, C., Lania, A., Desideri, A., De Sanctis, G., Coletta, M., Petruzzelli, R., Ascenzi, P., Coda, A., Bolognesi, M.
Deposit date:1995-02-01
Release date:1995-06-03
Last modified:2017-02-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Reptile heme protein structure: X-ray crystallographic study of the aquo-met and cyano-met derivatives of the loggerhead sea turtle (Caretta caretta) myoglobin at 2.0 A resolution.
J.Mol.Biol., 247, 1995
1EHY
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X-RAY STRUCTURE OF THE EPOXIDE HYDROLASE FROM AGROBACTERIUM RADIOBACTER AD1
Descriptor:PROTEIN (SOLUBLE EPOXIDE HYDROLASE), POTASSIUM ION
Authors:Nardini, M., Ridder, I.S., Rozeboom, H.J., Kalk, K.H., Rink, R., Janssen, D.B., Dijkstra, B.W.
Deposit date:1998-10-17
Release date:1999-10-16
Last modified:2012-05-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The x-ray structure of epoxide hydrolase from Agrobacterium radiobacter AD1. An enzyme to detoxify harmful epoxides.
J.Biol.Chem., 274, 1999
1HKU
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CTBP/BARS: A DUAL-FUNCTION PROTEIN INVOLVED IN TRANSCRIPTION COREPRESSION AND GOLGI MEMBRANE FISSION
Descriptor:C-TERMINAL BINDING PROTEIN 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, GLYCEROL, ...
Authors:Nardini, M., Spano, S., Cericola, C., Pesce, A., Massaro, A., Millo, E., Luini, A., Corda, D., Bolognesi, M.
Deposit date:2003-03-11
Release date:2003-06-19
Last modified:2016-12-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ctbp/Bars: A Dual-Function Protein Involved in Transcription Co-Repression and Golgi Membrane Fission
Embo J., 22, 2003
1HL3
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CTBP/BARS IN TERNARY COMPLEX WITH NAD(H) AND PIDLSKK PEPTIDE
Descriptor:C-TERMINAL BINDING PROTEIN 3, PRO-ILE-ASP-LEU-SER-LYS-LYS PEPTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Nardini, M., Spano, S., Cericola, C., Pesce, A., Massaro, A., Millo, E., Luini, A., Corda, D., Bolognesi, M.
Deposit date:2003-03-13
Release date:2003-06-19
Last modified:2016-12-21
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Ctbp/Bars: A Dual-Function Protein Involved in Transcription Co-Repression and Golgi Membrane Fission
Embo J., 22, 2003
1T1V
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CRYSTAL STRUCTURE OF THE GLUTAREDOXIN-LIKE PROTEIN SH3BGRL3 AT 1.6 A RESOLUTION
Descriptor:SH3 domain-binding glutamic acid-rich protein-like 3, GLYCEROL, SULFATE ION, ...
Authors:Nardini, M., Mazzocco, M., Massaro, M., Maffei, M., Vergano, A., Donadini, A., Scartezzini, M., Bolognesi, M.
Deposit date:2004-04-19
Release date:2004-06-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the glutaredoxin-like protein SH3BGRL3 at 1.6 A resolution
Biochem.Biophys.Res.Commun., 318, 2004
1UMA
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ALPHA-THROMBIN (HIRUGEN) COMPLEXED WITH NA-(N,N-DIMETHYLCARBAMOYL)-ALPHA-AZALYSINE
Descriptor:ALPHA-THROMBIN, HIRUDIN I, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Nardini, M., Pesce, A., Rizzi, M., Casale, E., Ferraccioli, R., Balliano, G., Milla, P., Ascenzi, P., Bolognesi, M.
Deposit date:1996-03-26
Release date:1996-11-08
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Human alpha-thrombin inhibition by the active site titrant N alpha-(N,N-dimethylcarbamoyl)-alpha-azalysine p-nitrophenyl ester: a comparative kinetic and X-ray crystallographic study.
J.Mol.Biol., 258, 1996
2IG3
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CRYSTAL STRUCTURE OF GROUP III TRUNCATED HEMOGLOBIN FROM CAMPYLOBACTER JEJUNI
Descriptor:Group III truncated haemoglobin, CYANIDE ION, ACETATE ION, ...
Authors:Nardini, M., Pesce, A., Labarre, M., Ascenzi, P., Guertin, M., Bolognesi, M.
Deposit date:2006-09-22
Release date:2006-10-10
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural determinants in the group III truncated hemoglobin from Campylobacter jejuni.
J.Biol.Chem., 281, 2006
2VEB
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HIGH RESOLUTION STRUCTURE OF PROTOGLOBIN FROM METHANOSARCINA ACETIVORANS C2A
Descriptor:PROTOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, PHOSPHATE ION, ...
Authors:Nardini, M., Pesce, A., Thijs, L., Saito, J.A., Dewilde, S., Alam, M., Ascenzi, P., Coletta, M., Ciaccio, C., Moens, L., Bolognesi, M.
Deposit date:2007-10-18
Release date:2008-01-22
Last modified:2012-08-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Archaeal Protoglobin Structure Indicates New Ligand Diffusion Paths and Modulation of Haem-Reactivity.
Embo Rep., 9, 2008
2VEE
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STRUCTURE OF PROTOGLOBIN FROM METHANOSARCINA ACETIVORANS C2A
Descriptor:PROTOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nardini, M., Pesce, A., Thijs, L., Saito, J.A., Dewilde, S., Alam, M., Ascenzi, P., Coletta, M., Ciaccio, C., Moens, L., Bolognesi, M.
Deposit date:2007-10-22
Release date:2008-01-22
Last modified:2012-07-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Archaeal Protoglobin Structure Indicates New Ligand Diffusion Paths and Modulation of Haem-Reactivity.
Embo Rep., 9, 2008
3GA0
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CTBP1/BARS GLY172->GLU MUTANT STRUCTURE: IMPAIRING NAD(H) BINDING AND DIMERIZATION
Descriptor:C-terminal-binding protein 1, FORMIC ACID
Authors:Nardini, M., Valente, C., Ricagno, S., Luini, A., Corda, D., Bolognesi, M.
Deposit date:2009-02-16
Release date:2009-04-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:CtBP1/BARS Gly172-->Glu mutant structure: impairing NAD(H)-binding and dimerization
Biochem.Biophys.Res.Commun., 381, 2009
4AWL
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THE NF-Y TRANSCRIPTION FACTOR IS STRUCTURALLY AND FUNCTIONALLY A SEQUENCE SPECIFIC HISTONE
Descriptor:NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT ALPHA, NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT BETA, NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA, ...
Authors:Nardini, M., Gnesutta, N., Donati, G., Gatta, R., Forni, C., Fossati, A., Vonrhein, C., Moras, D., Romier, C., Mantovani, R., Bolognesi, M.
Deposit date:2012-06-04
Release date:2013-01-30
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Sequence-Specific Transcription Factor NF-Y Displays Histone-Like DNA Binding and H2B-Like Ubiquitination.
Cell(Cambridge,Mass.), 152, 2013
1EX9
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CRYSTAL STRUCTURE OF THE PSEUDOMONAS AERUGINOSA LIPASE COMPLEXED WITH RC-(RP,SP)-1,2-DIOCTYLCARBAMOYL-GLYCERO-3-O-OCTYLPHOSPHONATE
Descriptor:LACTONIZING LIPASE, CALCIUM ION, OCTYL-PHOSPHINIC ACID 1,2-BIS-OCTYLCARBAMOYLOXY-ETHYL ESTER
Authors:Nardini, M., Lang, D.A., Liebeton, K., Jaeger, K.-E., Dijkstra, B.W.
Deposit date:2000-05-02
Release date:2000-10-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Crystal structure of pseudomonas aeruginosa lipase in the open conformation. The prototype for family I.1 of bacterial lipases.
J.Biol.Chem., 275, 2000
6EIO
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CRYSTAL STRUCTURE OF AN ICE BINDING PROTEIN FROM AN ANTARCTIC BIOLOGICAL CONSORTIUM
Descriptor:Antifreeze protein, GLYCEROL, SULFATE ION
Authors:Nardini, M., Mangiagalli, M., Nardone, V., Bar Dolev, M., Vena, V.F., Sarusi, G., Braslavsky, I., Lotti, M.
Deposit date:2017-09-19
Release date:2018-03-28
Last modified:2018-05-16
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Structure of a bacterial ice binding protein with two faces of interaction with ice.
FEBS J., 285, 2018
2HU2
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CTBP/BARS IN TERNARY COMPLEX WITH NAD(H) AND RRTGAPPAL PEPTIDE
Descriptor:C-terminal-binding protein 1, 9-mer peptide from Zinc finger protein 217, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Nardini, M., Bolognesi, M., Quinlan, K.G.R., Verger, A., Francescato, P., Crossley, M.
Deposit date:2006-07-26
Release date:2006-10-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Specific Recognition of ZNF217 and Other Zinc Finger Proteins at a Surface Groove of C-Terminal Binding Proteins
Mol.Cell.Biol., 26, 2006
1KR7
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CRYSTAL STRUCTURE OF THE NERVE TISSUE MINI-HEMOGLOBIN FROM THE NEMERTEAN WORM CEREBRATULUS LACTEUS
Descriptor:Neural globin, SULFATE ION, ACETATE ION, ...
Authors:Pesce, A., Nardini, M., Dewilde, S., Geuens, E., Yamauchi, k., Ascenzi, P., Riggs, A.F., Moens, L., Bolognesi, M.
Deposit date:2002-01-09
Release date:2002-05-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The 109 residue nerve tissue minihemoglobin from Cerebratulus lacteus highlights striking structural plasticity of the alpha-helical globin fold
Structure, 10, 2002
3QZX
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3D STRUCTURE OF FERRIC METHANOSARCINA ACETIVORANS PROTOGLOBIN Y61A MUTANT WITH UNKNOWN LIGAND
Descriptor:Methanosarcina acetivorans protoglobin, PROTOPORPHYRIN IX CONTAINING FE, PHOSPHATE ION, ...
Authors:Pesce, A., Tilleman, L., Dewilde, S., Ascenzi, P., Coletta, M., Ciaccio, C., Bruno, S., Moens, L., Bolognesi, M., Nardini, M.
Deposit date:2011-03-07
Release date:2011-06-08
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural heterogeneity and ligand gating in ferric methanosarcina acetivorans protoglobin mutants.
Iubmb Life, 63, 2011
3QZZ
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3D STRUCTURE OF FERRIC METHANOSARCINA ACETIVORANS PROTOGLOBIN Y61W MUTANT IN AQUOMET FORM
Descriptor:Methanosarcina acetivorans protoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pesce, A., Tilleman, L., Dewilde, S., Ascenzi, P., Coletta, M., Ciaccio, C., Bruno, S., Moens, L., Bolognesi, M., Nardini, M.
Deposit date:2011-03-07
Release date:2011-06-08
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural heterogeneity and ligand gating in ferric methanosarcina acetivorans protoglobin mutants.
Iubmb Life, 63, 2011
3R0G
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3D STRUCTURE OF FERRIC METHANOSARCINA ACETIVORANS PROTOGLOBIN I149F MUTANT IN AQUOMET FORM
Descriptor:Methanosarcina acetivorans protoglobin, PROTOPORPHYRIN IX CONTAINING FE, GLYCEROL, ...
Authors:Pesce, A., Tilleman, L., Dewilde, S., Ascenzi, P., Coletta, M., Ciaccio, C., Bruno, S., Moens, L., Bolognesi, M., Nardini, M.
Deposit date:2011-03-08
Release date:2011-06-08
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural heterogeneity and ligand gating in ferric methanosarcina acetivorans protoglobin mutants.
Iubmb Life, 63, 2011
4CSR
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HIGH RESOLUTION CRYSTAL STRUCTURE OF THE HISTONE FOLD DIMER (NF-YB)-(NF-YC)
Descriptor:NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT BETA, NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA, GLYCEROL
Authors:Gnesutta, N., Cocolo, S., Mantovani, R., Bolognesi, M., Nardini, M.
Deposit date:2014-03-09
Release date:2015-03-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High Resolution Crystal Structure of the Histone Fold Dimer (NF-Yb)-(NF-Yc)
To be Published
2W31
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GLOBIN DOMAIN OF GEOBACTER SULFURREDUCENS GLOBIN-COUPLED SENSOR
Descriptor:GLOBIN, PROTOPORPHYRIN IX CONTAINING FE, GLYCEROL
Authors:Pesce, A., Thijs, L., Nardini, M., Desmet, F., Sisinni, L., Gourlay, L., Bolli, A., Coletta, M., Van Doorslaer, S., Wan, X., Alam, M., Ascenzi, P., Moens, L., Bolognesi, M., Dewilde, S.
Deposit date:2008-11-05
Release date:2009-01-13
Last modified:2019-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Hise11 and Hisf8 Provide Bis-Histidyl Heme Hexa-Coordination in the Globin Domain of Geobacter Sulfurreducens Globin-Coupled Sensor.
J.Mol.Biol., 386, 2009
2XYK
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GROUP II 2-ON-2 HEMOGLOBIN FROM THE PLANT PATHOGEN AGROBACTERIUM TUMEFACIENS
Descriptor:2-ON-2 HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pesce, A., Nardini, M., LaBarre, M., Richard, C., Wittenberg, J.B., Wittenberg, B.A., Guertin, M., Bolognesi, M.
Deposit date:2010-11-18
Release date:2010-12-01
Last modified:2012-10-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Characterization of a Group II 2/2 Hemoglobin from the Plant Pathogen Agrobacterium Tumefaciens.
Biochim.Biophys.Acta, 1814, 2011
3U0Z
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TETRAMERIZATION DYNAMICS OF THE C-TERMINUS UNDERLIES ISOFORM-SPECIFIC CAMP-GATING IN HCN CHANNELS
Descriptor:Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
Authors:Lolicato, M., Nardini, M., Gazzarrini, S., Moller, S., Bertinetti, D., Herberg, F.W., Bolognesi, M., Martin, H., Fasolini, M., Bertrand, J.A., Arrigoni, C., Thiel, G., Moroni, A.
Deposit date:2011-09-29
Release date:2011-10-26
Last modified:2013-07-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Tetramerization dynamics of C-terminal domain underlies isoform-specific cAMP gating in hyperpolarization-activated cyclic nucleotide-gated channels.
J.Biol.Chem., 286, 2011
3U10
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TETRAMERIZATION DYNAMICS OF THE C-TERMINUS UNDERLIES ISOFORM-SPECIFIC CAMP-GATING IN HCN CHANNELS
Descriptor:Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
Authors:Lolicato, M., Nardini, M., Gazzarrini, S., Moller, S., Bertinetti, D., Herberg, F.W., Bolognesi, M., Martin, H., Fasolini, M., Bertrand, J.A., Arrigoni, C., Thiel, G., Moroni, A.
Deposit date:2011-09-29
Release date:2011-10-26
Last modified:2013-07-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Tetramerization dynamics of C-terminal domain underlies isoform-specific cAMP gating in hyperpolarization-activated cyclic nucleotide-gated channels.
J.Biol.Chem., 286, 2011
3U11
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TETRAMERIZATION DYNAMICS OF THE C-TERMINUS UNDERLIES ISOFORM-SPECIFIC CAMP-GATING IN HCN CHANNELS
Descriptor:Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, GLYCEROL
Authors:Lolicato, M., Nardini, M., Gazzarrini, S., Moller, S., Bertinetti, D., Herberg, F.W., Bolognesi, M., Martin, H., Fasolini, M., Bertrand, J.A., Arrigoni, C., Thiel, G., Moroni, A.
Deposit date:2011-09-29
Release date:2011-10-26
Last modified:2013-07-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Tetramerization dynamics of C-terminal domain underlies isoform-specific cAMP gating in hyperpolarization-activated cyclic nucleotide-gated channels.
J.Biol.Chem., 286, 2011