Author results

3RRX
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CRYSTAL STRUCTURE OF Q683A MUTANT OF EXO-1,3/1,4-BETA-GLUCANASE (EXOP) FROM PSEUDOALTEROMONAS SP. BB1
分子名称:Exo-1,3/1,4-beta-glucanase, CALCIUM ION, SODIUM ION, ...
著者Nakatani, Y., Cutfield, S.M., Cutfield, J.F.
登録日2011-05-01
公開日2011-12-21
最終更新日2014-03-12
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and activity of exo-1,3/1,4-beta-glucanase from marine bacterium Pseudoalteromonas sp. BB1 showing a novel C-terminal domain
Febs J., 279, 2012
5WED
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STRUCTURE OF BACTERIAL TYPE II NADH DEHYDROGENASE FROM CALDALKALIBACILLUS THERMARUM AT 2.15A RESOLUTION
分子名称:FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE
著者Nakatani, Y., Aragao, D., Cook, G.M.
登録日2017-07-09
公開日2017-10-18
最終更新日2018-04-18
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of type II NADH:quinone oxidoreductase from Caldalkalibacillus thermarum with an improved resolution of 2.15 angstrom.
Acta Crystallogr F Struct Biol Commun, 73, 2017
3F95
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CRYSTAL STRUCTURE OF EXTRA C-TERMINAL DOMAIN (X) OF EXO-1,3/1,4-BETA-GLUCANASE (EXOP) FROM PSEUDOALTEROMONAS SP. BB1
分子名称:Beta-glucosidase, CHLORIDE ION
著者Nakatani, Y., Cutfield, S.M., Cutfield, J.F.
登録日2008-11-13
公開日2009-11-17
最終更新日2011-12-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and activity of exo-1,3/1,4-beta-glucanase from marine bacterium Pseudoalteromonas sp. BB1 showing a novel C-terminal domain
Febs J., 2011
3I4I
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CRYSTAL STRUCTURE OF A PROKARYOTIC BETA-1,3-1,4-GLUCANASE (LICHENASE) DERIVED FROM A MOUSE HINDGUT METAGENOME
分子名称:1,3-1,4-beta-glucanase, CALCIUM ION
著者Nakatani, Y., Nalder, T.D., Tannock, G.W., Cutfield, J.F., Jack, R.W., Carne, A.
登録日2009-07-01
公開日2010-07-21
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal structure of a prokaryotic beta-1,3-1,4-glucanase (lichenase) derived from a mouse hindgut metagenome
To be Published
3USZ
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CRYSTAL STRUCTURE OF TRUNCATED EXO-1,3/1,4-BETA-GLUCANASE (EXOP) FROM PSEUDOALTEROMONAS SP. BB1
分子名称:Exo-1,3/1,4-beta-glucanase, CALCIUM ION, SODIUM ION, ...
著者Nakatani, Y., Cutfield, S.M., Cutfield, J.F.
登録日2011-11-24
公開日2011-12-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and activity of exo-1,3/1,4-beta-glucanase from marine bacterium Pseudoalteromonas sp. BB1 showing a novel C-terminal domain
Febs J., 2011
3UT0
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CRYSTAL STRUCTURE OF EXO-1,3/1,4-BETA-GLUCANASE (EXOP) FROM PSEUDOALTEROMONAS SP. BB1
分子名称:Exo-1,3/1,4-beta-glucanase, CALCIUM ION, SODIUM ION, ...
著者Nakatani, Y., Cutfield, S.M., Cutfield, J.F.
登録日2011-11-24
公開日2011-12-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and activity of exo-1,3/1,4-beta-glucanase from marine bacterium Pseudoalteromonas sp. BB1 showing a novel C-terminal domain
Febs J., 2011
4IC3
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CRYSTAL STRUCTURE OF THE F495L MUTANT XIAP RING DOMAIN
分子名称:E3 ubiquitin-protein ligase XIAP, ZINC ION, NICKEL (II) ION
著者Nakatani, Y., Day, C.L.
登録日2012-12-09
公開日2012-12-19
最終更新日2013-07-10
実験手法X-RAY DIFFRACTION (1.783 Å)
主引用文献Regulation of ubiquitin transfer by XIAP, a dimeric RING E3 ligase
Biochem.J., 450, 2013
4M80
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THE STRUCTURE OF E292S GLYCOSYNTHASE VARIANT OF EXO-1,3-BETA-GLUCANASE FROM CANDIDA ALBICANS AT 1.85A RESOLUTION
分子名称:EXO-1,3-BETA-GLUCANASE
著者Nakatani, Y., Cutfield, S.M., Larsen, D.S., Cutfield, J.F.
登録日2013-08-12
公開日2014-06-25
実験手法X-RAY DIFFRACTION (1.858 Å)
主引用文献Major Change in Regiospecificity for the Exo-1,3-beta-glucanase from Candida albicans following Its Conversion to a Glycosynthase.
Biochemistry, 53, 2014
4M81
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THE STRUCTURE OF E292S GLYCOSYNTHASE VARIANT OF EXO-1,3-BETA-GLUCANASE FROM CANDIDA ALBICANS COMPLEXED WITH 1-FLUORO-ALPHA-D-GLUCOPYRANOSIDE (DONOR) AND P-NITROPHENYL BETA-D-GLUCOPYRANOSIDE (ACCEPTOR) AT 1.86A RESOLUTION
分子名称:EXO-1,3-BETA-GLUCANASE, 1-FLUORO-ALPHA-1-DEOXY-D-GLUCOSE, 4-nitrophenyl beta-D-glucopyranoside, ...
著者Nakatani, Y., Cutfield, S.M., Larsen, D.S., Cutfield, J.F.
登録日2013-08-12
公開日2014-06-25
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Major Change in Regiospecificity for the Exo-1,3-beta-glucanase from Candida albicans following Its Conversion to a Glycosynthase.
Biochemistry, 53, 2014
4M82
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THE STRUCTURE OF E292S GLYCOSYNTHASE VARIANT OF EXO-1,3-BETA-GLUCANASE FROM CANDIDA ALBICANS COMPLEXED WITH P-NITROPHENYL-GENTIOBIOSIDE (PRODUCT) AT 1.6A RESOLUTION
分子名称:EXO-1,3-BETA-GLUCANASE, 4-nitrophenyl 6-O-beta-D-glucopyranosyl-beta-D-glucopyranoside, BETA-D-GLUCOSE, ...
著者Nakatani, Y., Cutfield, S.M., Larsen, D.S., Cutfield, J.F.
登録日2013-08-12
公開日2014-06-25
実験手法X-RAY DIFFRACTION (1.592 Å)
主引用文献Major Change in Regiospecificity for the Exo-1,3-beta-glucanase from Candida albicans following Its Conversion to a Glycosynthase.
Biochemistry, 53, 2014
3N9K
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F229A/E292S DOUBLE MUTANT OF EXO-BETA-1,3-GLUCANASE FROM CANDIDA ALBICANS IN COMPLEX WITH LAMINARITRIOSE AT 1.7 A
分子名称:Glucan 1,3-beta-glucosidase, CALCIUM ION, BETA-D-GLUCOSE
著者Nakatani, Y., Cutfield, S.M., Cutfield, J.F.
登録日2010-05-30
公開日2010-09-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Carbohydrate binding sites in Candida albicans exo-beta-1,3-glucanase and the role of the Phe-Phe 'clamp' at the active site entrance
Febs J., 277, 2010
3O6A
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F144Y/F258Y DOUBLE MUTANT OF EXO-BETA-1,3-GLUCANASE FROM CANDIDA ALBICANS AT 2 A
分子名称:Glucan 1,3-beta-glucosidase
著者Nakatani, Y., Cutfield, S.M., Cutfield, J.F.
登録日2010-07-28
公開日2010-09-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Carbohydrate binding sites in Candida albicans exo-beta-1,3-glucanase and the role of the Phe-Phe 'clamp' at the active site entrance
Febs J., 277, 2010
4IC2
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CRYSTAL STRUCTURE OF THE XIAP RING DOMAIN
分子名称:E3 ubiquitin-protein ligase XIAP, ZINC ION, NICKEL (II) ION
著者Linke, K., Nakatani, Y., Day, C.L.
登録日2012-12-09
公開日2012-12-19
最終更新日2013-07-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Regulation of ubiquitin transfer by XIAP, a dimeric RING E3 ligase
Biochem.J., 450, 2013
4NWZ
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STRUCTURE OF BACTERIAL TYPE II NADH DEHYDROGENASE FROM CALDALKALIBACILLUS THERMARUM AT 2.5A RESOLUTION
分子名称:FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE
著者Nakatani, Y., Heikal, A., Lott, J.S., Sazanov, L.A., Baker, E.N., Cook, G.M.
登録日2013-12-07
公開日2014-02-19
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the bacterial type II NADH dehydrogenase: a monotopic membrane protein with an essential role in energy generation.
Mol.Microbiol., 2014
1BO4
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CRYSTAL STRUCTURE OF A GCN5-RELATED N-ACETYLTRANSFERASE: SERRATIA MARESCENS AMINOGLYCOSIDE 3-N-ACETYLTRANSFERASE
分子名称:PROTEIN (SERRATIA MARCESCENS AMINOGLYCOSIDE-3-N-ACETYLTRANSFERASE), SPERMIDINE, COENZYME A
著者Wolf, E., Vassilev, A., Makino, Y., Sali, A., Nakatani, Y., Burley, S.K.
登録日1998-08-08
公開日1998-10-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a GCN5-related N-acetyltransferase: Serratia marcescens aminoglycoside 3-N-acetyltransferase.
Cell(Cambridge,Mass.), 94, 1998
6BDO
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STRUCTURE OF BACTERIAL TYPE II NADH DEHYDROGENASE FROM CALDALKALIBACILLUS THERMARUM COMPLEXED WITH A QUINONE INHIBITOR HQNO AT 2.8A RESOLUTION
分子名称:FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE, 2-HEPTYL-4-HYDROXY QUINOLINE N-OXIDE
著者Cook, G.M., Aragao, D., Nakatani, Y.
登録日2017-10-23
公開日2018-05-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the NDH-2 - HQNO inhibited complex provides molecular insight into quinone-binding site inhibitors.
Biochim. Biophys. Acta, 1859, 2018
1TAF
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DROSOPHILA TBP ASSOCIATED FACTORS DTAFII42/DTAFII62 HETEROTETRAMER
分子名称:TFIID TBP ASSOCIATED FACTOR 42, TFIID TBP ASSOCIATED FACTOR 62, ZINC ION
著者Xie, X., Kokubo, T., Cohen, S.L., Mirza, U.A., Hoffmann, A., Chait, B.T., Roeder, R.G., Nakatani, Y., Burley, S.K.
登録日1996-06-01
公開日1996-12-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural similarity between TAFs and the heterotetrameric core of the histone octamer.
Nature, 380, 1996
1TBA
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SOLUTION STRUCTURE OF A TBP-TAFII230 COMPLEX: PROTEIN MIMICRY OF THE MINOR GROOVE SURFACE OF THE TATA BOX UNWOUND BY TBP, NMR, 25 STRUCTURES
分子名称:TRANSCRIPTION INITIATION FACTOR IID 230K CHAIN, TRANSCRIPTION INITIATION FACTOR TFIID
著者Liu, D., Ishima, R., Tong, K.I., Bagby, S., Kokubo, T., Muhandiram, D.R., Kay, L.E., Nakatani, Y., Ikura, M.
登録日1998-08-16
公開日1999-08-16
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution structure of a TBP-TAF(II)230 complex: protein mimicry of the minor groove surface of the TATA box unwound by TBP.
Cell(Cambridge,Mass.), 94, 1998
4KQ6
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PRODUCT COMPLEX OF LUMAZINE SYNTHASE FROM CANDIDA GLABRATA
分子名称:6,7-dimethyl-8-ribityllumazine synthase, SULFATE ION, 1-deoxy-1-(6,7-dimethyl-2,4-dioxo-3,4-dihydropteridin-8(2H)-yl)-D-ribitol, ...
著者Shankar, M., Wilbanks, S.M., Nakatani, Y., Monk, B.C., Tyndall, J.D.A.
登録日2013-05-14
公開日2013-05-29
最終更新日2013-08-28
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Catalysis product captured in lumazine synthase from the fungal pathogen Candida glabrata.
Acta Crystallogr.,Sect.D, 69, 2013
4OSF
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4-(2-ISOTHIOCYANATOETHYL)PHENOL INHIBITOR COMPLEXED WITH MACROPHAGE MIGRATION INHIBITORY FACTOR
分子名称:Macrophage migration inhibitory factor, N-[2-(4-hydroxyphenyl)ethyl]thioformamide, SULFATE ION, ...
著者Spencer, E.S., Dale, E.J., Gommans, A.L., Vo, C.T., Rutledge, M.T., Nakatani, Y., Gamble, A.B., Smith, R.A.J., Wilbanks, S.M., Hampton, M.B., Tyndall, J.D.A.
登録日2014-02-12
公開日2014-03-12
最終更新日2015-04-01
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Multiple binding modes of isothiocyanates that inhibit macrophage migration inhibitory factor
Eur.J.Med.Chem., 93, 2015
4OYQ
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(6-ISOTHIOCYANATOHEXYL)BENZENE INHIBITOR COMPLEXED WITH MACROPHAGE MIGRATION INHIBITORY FACTOR
分子名称:Macrophage migration inhibitory factor, 6-isothiocyanatohexylbenzene, SULFATE ION, ...
著者Spencer, E.S., Dale, E.J., Gommans, A.L., Vo, C.T., Rutledge, M.T., Nakatani, Y., Gamble, A.B., Smith, R.A.J., Wilbanks, S.M., Hampton, M.B., Tyndall, J.D.A.
登録日2014-02-12
公開日2014-03-05
最終更新日2014-08-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献To be published
To be published
4QHR
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THE STRUCTURE OF ALANINE RACEMASE FROM ACINETOBACTER BAUMANNII
分子名称:Alanine racemase
著者Davis, E., Scaletti-Hutchinson, E., Nakatani, Y., Krause, K.L.
登録日2014-05-29
公開日2015-05-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structure of alanine racemase from Acinetobacter baumannii
ACTA CRYSTALLOGR.,SECT.F, 70, 2014
4ZK9
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THE CHEMOKINE BINDING PROTEIN OF ORF VIRUS COMPLEXED WITH CCL2
分子名称:Chemokine binding protein, C-C motif chemokine 2, N-ACETYL-D-GLUCOSAMINE, ...
著者Knapp, K.M., Nakatani, Y., Krause, K.L.
登録日2015-04-30
公開日2015-07-08
最終更新日2018-06-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of Orf Virus Chemokine Binding Protein in Complex with Host Chemokines Reveal Clues to Broad Binding Specificity.
Structure, 23, 2015
4ZKB
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THE CHEMOKINE BINDING PROTEIN OF ORF VIRUS COMPLEXED WITH CCL3
分子名称:Chemokine binding protein, C-C motif chemokine 3, N-ACETYL-D-GLUCOSAMINE, ...
著者Knapp, K.M., Nakatani, Y., Krause, K.L.
登録日2015-04-30
公開日2015-07-08
最終更新日2018-06-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of Orf Virus Chemokine Binding Protein in Complex with Host Chemokines Reveal Clues to Broad Binding Specificity.
Structure, 23, 2015
4ZKC
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THE CHEMOKINE BINDING PROTEIN OF ORF VIRUS COMPLEXED WITH CCL7
分子名称:Chemokine binding protein, C-C motif chemokine 7, N-ACETYL-D-GLUCOSAMINE, ...
著者Knapp, K.M., Nakatani, Y., Krause, K.L.
登録日2015-04-30
公開日2015-07-08
最終更新日2018-06-13
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structures of Orf Virus Chemokine Binding Protein in Complex with Host Chemokines Reveal Clues to Broad Binding Specificity.
Structure, 23, 2015
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