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3AU6
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BU of 3au6 by Molmil
DNA polymerase X from Thermus thermophilus HB8 ternary complex with primer/template DNA and ddGTP
Descriptor: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*AP*GP*TP*AP*TP*(DDG))-3', 5'-D(*CP*GP*GP*CP*CP*AP*TP*AP*CP*TP*G)-3', ...
Authors:Nakane, S, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-01-28
Release date:2012-01-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3AU2
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BU of 3au2 by Molmil
DNA polymerase X from Thermus thermophilus HB8 complexed with Ca-dGTP
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
Authors:Nakane, S, Ishikawa, H, Wakamatsu, T, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-01-28
Release date:2012-01-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3AUO
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BU of 3auo by Molmil
DNA polymerase X from Thermus thermophilus HB8 ternary complex with 1-nt gapped DNA and ddGTP
Descriptor: 1-nt gapped DNA, 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA polymerase beta family (X family), ...
Authors:Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-02-11
Release date:2012-01-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3AYT
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BU of 3ayt by Molmil
TTHB071 protein from Thermus thermophilus HB8
Descriptor: Putative uncharacterized protein TTHB071, ZINC ION
Authors:Nakane, S, Wakamatsu, T, Fukui, K, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-05-17
Release date:2011-10-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:In vivo, in vitro, and x-ray crystallographic analyses suggest the involvement of an uncharacterized triose-phosphate isomerase (TIM) barrel protein in protection against oxidative stress
J.Biol.Chem., 286, 2011
3AYV
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BU of 3ayv by Molmil
TTHB071 protein from Thermus thermophilus HB8 soaking with ZnCl2
Descriptor: Putative uncharacterized protein TTHB071, ZINC ION
Authors:Nakane, S, Wakamatsu, T, Fukui, K, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-05-17
Release date:2011-10-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:In vivo, in vitro, and x-ray crystallographic analyses suggest the involvement of an uncharacterized triose-phosphate isomerase (TIM) barrel protein in protection against oxidative stress
J.Biol.Chem., 286, 2011
3B0Y
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BU of 3b0y by Molmil
K263D mutant of PolX from Thermus thermophilus HB8 complexed with Ca-dGTP
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
Authors:Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-06-17
Release date:2012-05-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3B0X
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BU of 3b0x by Molmil
K263A mutant of PolX from Thermus thermophilus HB8 complexed with Ca-dGTP
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
Authors:Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-06-17
Release date:2012-05-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3AAM
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BU of 3aam by Molmil
Crystal structure of endonuclease IV from Thermus thermophilus HB8
Descriptor: Endonuclease IV, MANGANESE (II) ION, PHOSPHATE ION
Authors:Asano, R, Ishikawa, H, Nakane, S, Baba, S, Nakagawa, N, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-11-20
Release date:2010-12-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:An additional C-terminal loop in endonuclease IV, an apurinic/apyrimidinic endonuclease, controls binding affinity to DNA
Acta Crystallogr.,Sect.D, 67, 2011
3AAL
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BU of 3aal by Molmil
Crystal Structure of endonuclease IV from Geobacillus kaustophilus
Descriptor: CACODYLATE ION, FE (III) ION, Probable endonuclease 4, ...
Authors:Asano, R, Ishikawa, H, Nakane, S, Nakagawa, N, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-11-20
Release date:2010-12-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:An additional C-terminal loop in endonuclease IV, an apurinic/apyrimidinic endonuclease, controls binding affinity to DNA
Acta Crystallogr.,Sect.D, 67, 2011

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