Author results

1EW0
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CRYSTAL STRUCTURE ANALYSIS OF THE SENSOR DOMAIN OF RMFIXL(FERROUS FORM)
Descriptor:FIXL, PROTOPORPHYRIN IX CONTAINING FE
Authors:Miyatake, H., Mukai, M., Park, S.-Y., Adachi, S., Tamura, K., Nakamura, H., Nakamura, K., Tsuchiya, T., Iizuka, T., Shiro, Y.
Deposit date:2000-04-21
Release date:2000-05-10
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Sensory mechanism of oxygen sensor FixL from Rhizobium meliloti: crystallographic, mutagenesis and resonance Raman spectroscopic studies
J.MOL.BIOL., 301, 2000
1D06
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STRUCTURAL BASIS OF DIMERIZATION AND SENSORY MECHANISMS OF OXYGEN-SENSING DOMAIN OF RHIZOBIUM MELILOTI FIXL DETERMINED AT 1.4A RESOLUTION
Descriptor:nitrogen fixation regulatory protein fixL, PROTOPORPHYRIN IX CONTAINING FE
Authors:Miyatake, H., Mukai, M., Park, S.-Y., Adachi, S., Tamura, K., Nakamura, H., Nakamura, K., Tsuchiya, T., Iizuka, T., Shiro, Y.
Deposit date:1999-09-09
Release date:2000-03-15
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Sensory mechanism of oxygen sensor FixL from Rhizobium meliloti: crystallographic, mutagenesis and resonance Raman spectroscopic studies
J.MOL.BIOL., 301, 2000
1IDY
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STRUCTURE OF MYB TRANSFORMING PROTEIN, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor:MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3
Authors:Furukawa, K., Oda, M., Nakamura, H.
Deposit date:1996-08-15
Release date:1996-12-23
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:A small engineered protein lacks structural uniqueness by increasing the side-chain conformational entropy.
Proc.Natl.Acad.Sci.USA, 93, 1996
1IDZ
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STRUCTURE OF MYB TRANSFORMING PROTEIN, NMR, 20 STRUCTURES
Descriptor:MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3
Authors:Furukawa, K., Oda, M., Nakamura, H.
Deposit date:1996-08-15
Release date:1996-12-23
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:A small engineered protein lacks structural uniqueness by increasing the side-chain conformational entropy.
Proc.Natl.Acad.Sci.USA, 93, 1996
1MBE
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MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 1
Descriptor:MYB PROTO-ONCOGENE PROTEIN
Authors:Ogata, K., Morikawa, S., Nakamura, H., Hojo, H., Yoshimura, S., Zhang, R., Aimoto, S., Ametani, Y., Hirata, Z., Sarai, A., Ishii, S., Nishimura, Y.
Deposit date:1995-05-19
Release date:1995-07-31
Last modified:2012-02-29
Method:SOLUTION NMR
Cite:Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.
Nat.Struct.Biol., 2, 1995
1MBF
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MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 1
Descriptor:MYB PROTO-ONCOGENE PROTEIN
Authors:Ogata, K., Morikawa, S., Nakamura, H., Hojo, H., Yoshimura, S., Zhang, R., Aimoto, S., Ametani, Y., Hirata, Z., Sarai, A., Ishii, S., Nishimura, Y.
Deposit date:1995-05-19
Release date:1995-07-31
Last modified:2012-02-29
Method:SOLUTION NMR
Cite:Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.
Nat.Struct.Biol., 2, 1995
1MBG
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MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 2
Descriptor:MYB PROTO-ONCOGENE PROTEIN
Authors:Ogata, K., Morikawa, S., Nakamura, H., Hojo, H., Yoshimura, S., Zhang, R., Aimoto, S., Ametani, Y., Hirata, Z., Sarai, A., Ishii, S., Nishimura, Y.
Deposit date:1995-05-19
Release date:1995-07-31
Last modified:2012-02-29
Method:SOLUTION NMR
Cite:Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.
Nat.Struct.Biol., 2, 1995
1MBH
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MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 2
Descriptor:C-MYB
Authors:Ogata, K., Morikawa, S., Nakamura, H., Hojo, H., Yoshimura, S., Zhang, R., Aimoto, S., Ametani, Y., Hirata, Z., Sarai, A., Ishii, S., Nishimura, Y.
Deposit date:1995-05-19
Release date:1995-09-15
Last modified:2012-02-29
Method:SOLUTION NMR
Cite:Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.
Nat.Struct.Biol., 2, 1995
1MBJ
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MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3
Descriptor:MYB PROTO-ONCOGENE PROTEIN
Authors:Ogata, K., Morikawa, S., Nakamura, H., Hojo, H., Yoshimura, S., Zhang, R., Aimoto, S., Ametani, Y., Hirata, Z., Sarai, A., Ishii, S., Nishimura, Y.
Deposit date:1995-05-19
Release date:1995-07-31
Last modified:2012-02-29
Method:SOLUTION NMR
Cite:Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.
Nat.Struct.Biol., 2, 1995
1MBK
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MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3
Descriptor:MYB PROTO-ONCOGENE PROTEIN
Authors:Ogata, K., Morikawa, S., Nakamura, H., Hojo, H., Yoshimura, S., Zhang, R., Aimoto, S., Ametani, Y., Hirata, Z., Sarai, A., Ishii, S., Nishimura, Y.
Deposit date:1995-05-19
Release date:1995-07-31
Last modified:2012-02-29
Method:SOLUTION NMR
Cite:Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb.
Nat.Struct.Biol., 2, 1995
1GOA
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COOPERATIVE STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY INSERTION OF GLY-80B AND GLY-77-> ALA SUBSTITUTION
Descriptor:RIBONUCLEASE H
Authors:Ishikawa, K., Kimura, S., Nakamura, H., Morikawa, K., Kanaya, S.
Deposit date:1993-05-10
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cooperative stabilization of Escherichia coli ribonuclease HI by insertion of Gly-80b and Gly-77-->Ala substitution.
Biochemistry, 32, 1993
1GOB
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COOPERATIVE STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY INSERTION OF GLY-80B AND GLY-77-> ALA SUBSTITUTION
Descriptor:RIBONUCLEASE H
Authors:Ishikawa, K., Kimura, S., Nakamura, H., Morikawa, K., Kanaya, S.
Deposit date:1993-05-10
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cooperative stabilization of Escherichia coli ribonuclease HI by insertion of Gly-80b and Gly-77-->Ala substitution.
Biochemistry, 32, 1993
1GOC
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COOPERATIVE STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY INSERTION OF GLY-80B AND GLY-77-> ALA SUBSTITUTION
Descriptor:RIBONUCLEASE H
Authors:Ishikawa, K., Kimura, S., Nakamura, H., Morikawa, K., Kanaya, S.
Deposit date:1993-05-10
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cooperative stabilization of Escherichia coli ribonuclease HI by insertion of Gly-80b and Gly-77-->Ala substitution.
Biochemistry, 32, 1993
1LAV
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STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY CAVITY-FILLING MUTATIONS WITHIN A HYDROPHOBIC CORE
Descriptor:RIBONUCLEASE H
Authors:Ishikawa, K., Nakamura, H., Morikawa, K., Kanaya, S.
Deposit date:1993-05-10
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Stabilization of Escherichia coli ribonuclease HI by cavity-filling mutations within a hydrophobic core.
Biochemistry, 32, 1993
1LAW
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STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY CAVITY-FILLING MUTATIONS WITHIN A HYDROPHOBIC CORE
Descriptor:RIBONUCLEASE H
Authors:Ishikawa, K., Nakamura, H., Morikawa, K., Kanaya, S.
Deposit date:1993-05-10
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Stabilization of Escherichia coli ribonuclease HI by cavity-filling mutations within a hydrophobic core.
Biochemistry, 32, 1993
1MSE
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SOLUTION STRUCTURE OF A SPECIFIC DNA COMPLEX OF THE MYB DNA-BINDING DOMAIN WITH COOPERATIVE RECOGNITION HELICES
Descriptor:DNA (5'-D(*CP*CP*TP*AP*AP*CP*TP*GP*AP*CP*AP*CP*AP*CP*AP*T)-3'), DNA (5'-D(*AP*TP*GP*TP*GP*TP*GP*TP*CP*AP*GP*TP*TP*AP*GP*G)-3'), C-Myb DNA-Binding Domain
Authors:Ogata, K., Morikawa, S., Nakamura, H., Sekikawa, A., Inoue, T., Kanai, H., Sarai, A., Ishii, S., Nishimura, Y.
Deposit date:1995-01-24
Release date:1995-03-31
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of a specific DNA complex of the Myb DNA-binding domain with cooperative recognition helices.
Cell(Cambridge,Mass.), 79, 1994
1MSF
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SOLUTION STRUCTURE OF A SPECIFIC DNA COMPLEX OF THE MYB DNA-BINDING DOMAIN WITH COOPERATIVE RECOGNITION HELICES
Descriptor:DNA (5'-D(*CP*CP*TP*AP*AP*CP*TP*GP*AP*CP*AP*CP*AP*CP*AP*T)-3'), DNA (5'-D(*AP*TP*GP*TP*GP*TP*GP*TP*CP*AP*GP*TP*TP*AP*GP*G)-3'), C-Myb DNA-Binding Domain
Authors:Ogata, K., Morikawa, S., Nakamura, H., Sekikawa, A., Inoue, T., Kanai, H., Sarai, A., Ishii, S., Nishimura, Y.
Deposit date:1995-01-24
Release date:1995-03-31
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of a specific DNA complex of the Myb DNA-binding domain with cooperative recognition helices.
Cell(Cambridge,Mass.), 79, 1994
3A0R
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CRYSTAL STRUCTURE OF HISTIDINE KINASE THKA (TM1359) IN COMPLEX WITH RESPONSE REGULATOR PROTEIN TRRA (TM1360)
Descriptor:Sensor protein, Response regulator, MERCURY (II) ION
Authors:Yamada, S., Sugimoto, H., Kobayashi, M., Ohno, A., Nakamura, H., Shiro, Y.
Deposit date:2009-03-24
Release date:2009-10-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structure of PAS-linked histidine kinase and the response regulator complex
Structure, 17, 2009
4YN8
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CRYSTAL STRUCTURE OF RESPONSE REGULATOR CHRA IN HEME-SENSING TWO COMPONENT SYSTEM
Descriptor:Response regulator ChrA, SULFATE ION, MAGNESIUM ION
Authors:Doi, A., Nakamura, H., Shiro, Y., Sugimoto, H.
Deposit date:2015-03-09
Release date:2015-08-19
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the response regulator ChrA in the haem-sensing two-component system of Corynebacterium diphtheriae.
Acta Crystallogr.,Sect.F, 71, 2015
1HNR
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H-NS (DNA-BINDING DOMAIN)
Descriptor:H-NS
Authors:Shindo, H., Iwaki, T., Ieda, R., Kurumizaka, H., Ueguchi, C., Mizuno, T., Morikawa, S., Nakamura, H., Kuboniwa, H.
Deposit date:1995-04-06
Release date:1995-07-10
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from Escherichia coli.
FEBS Lett., 360, 1995
1HNS
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H-NS (DNA-BINDING DOMAIN)
Descriptor:H-NS
Authors:Shindo, H., Iwaki, T., Ieda, R., Kurumizaka, H., Ueguchi, C., Mizuno, T., Morikawa, S., Nakamura, H., Kuboniwa, H.
Deposit date:1995-04-06
Release date:1995-07-10
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from Escherichia coli.
FEBS Lett., 360, 1995
1RBR
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STRUCTURAL STUDY OF MUTANTS OF ESCHERICHIA COLI RIBONUCLEASE HI WITH ENHANCED THERMOSTABILITY
Descriptor:RIBONUCLEASE H
Authors:Ishikawa, K., Kimura, S., Kanaya, S., Morikawa, K., Nakamura, H.
Deposit date:1993-02-16
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural study of mutants of Escherichia coli ribonuclease HI with enhanced thermostability.
Protein Eng., 6, 1993
1RBS
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STRUCTURAL STUDY OF MUTANTS OF ESCHERICHIA COLI RIBONUCLEASE HI WITH ENHANCED THERMOSTABILITY
Descriptor:RIBONUCLEASE H
Authors:Ishikawa, K., Kimura, S., Kanaya, S., Morikawa, K., Nakamura, H.
Deposit date:1993-02-16
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural study of mutants of Escherichia coli ribonuclease HI with enhanced thermostability.
Protein Eng., 6, 1993
1RBT
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STRUCTURAL STUDY OF MUTANTS OF ESCHERICHIA COLI RIBONUCLEASE HI WITH ENHANCED THERMOSTABILITY
Descriptor:RIBONUCLEASE H
Authors:Ishikawa, K., Kimura, S., Kanaya, S., Morikawa, K., Nakamura, H.
Deposit date:1993-02-16
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural study of mutants of Escherichia coli ribonuclease HI with enhanced thermostability.
Protein Eng., 6, 1993
1RBU
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STRUCTURAL STUDY OF MUTANTS OF ESCHERICHIA COLI RIBONUCLEASE HI WITH ENHANCED THERMOSTABILITY
Descriptor:RIBONUCLEASE H
Authors:Ishikawa, K., Kimura, S., Kanaya, S., Morikawa, K., Nakamura, H.
Deposit date:1993-02-16
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural study of mutants of Escherichia coli ribonuclease HI with enhanced thermostability.
Protein Eng., 6, 1993