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1QGI
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BU of 1qgi by Molmil
CHITOSANASE FROM BACILLUS CIRCULANS
Descriptor: 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEIN (CHITOSANASE), SULFATE ION
Authors:Saito, J, Kita, A, Higuchi, Y, Nagata, Y, Ando, A, Miki, K.
Deposit date:1999-04-28
Release date:1999-10-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of chitosanase from Bacillus circulans MH-K1 at 1.6-A resolution and its substrate recognition mechanism.
J.Biol.Chem., 274, 1999
1D07
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Hydrolytic haloalkane dehalogenase linb from sphingomonas paucimobilis UT26 with 1,3-propanediol, a product of debromidation of dibrompropane, at 2.0A resolution
Descriptor: 1,3-PROPANDIOL, BROMIDE ION, HALOALKANE DEHALOGENASE
Authors:Marek, J, Vevodova, J, Damborsky, J, Smatanova, I, Svensson, L.A, Newman, J, Nagata, Y, Takagi, M.
Deposit date:1999-09-09
Release date:2000-09-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the haloalkane dehalogenase from Sphingomonas paucimobilis UT26.
Biochemistry, 39, 2000
1CV2
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Hydrolytic haloalkane dehalogenase linb from sphingomonas paucimobilis UT26 AT 1.6 A resolution
Descriptor: HALOALKANE DEHALOGENASE
Authors:Marek, J, Vevodova, J, Damborsky, J, Smatanova, I, Svensson, L.A, Newman, J, Nagata, Y, Takagi, M.
Deposit date:1999-08-22
Release date:2000-09-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of the haloalkane dehalogenase from Sphingomonas paucimobilis UT26.
Biochemistry, 39, 2000
1G42
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STRUCTURE OF 1,3,4,6-TETRACHLORO-1,4-CYCLOHEXADIENE HYDROLASE (LINB) FROM SPHINGOMONAS PAUCIMOBILIS COMPLEXED WITH 1,2-DICHLOROPROPANE
Descriptor: 1,2-DICHLORO-PROPANE, 1,3,4,6-TETRACHLORO-1,4-CYCLOHEXADIENE HYDROLASE, ACETATE ION, ...
Authors:Oakley, A.J, Prokop, Z, Bohac, M, Kmunicek, J, Jedlicka, T, Monincova, M, Kuta-Smatanova, I, Nagata, Y, Damborsky, J, Wilce, M.C.J.
Deposit date:2000-10-26
Release date:2001-10-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Exploring the structure and activity of haloalkane dehalogenase from Sphingomonas paucimobilis UT26: evidence for product- and water-mediated inhibition.
Biochemistry, 41, 2002
1G4H
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LINB COMPLEXED WITH BUTAN-1-OL
Descriptor: 1,3,4,6-TETRACHLORO-1,4-CYCLOHEXADIENE HYDROLASE, 1-BUTANOL, CALCIUM ION, ...
Authors:Oakley, A.J, Prokop, Z, Bohac, M, Kmunicek, J, Jedlicka, T, Monincova, M, Kuta-Smatanova, I, Nagata, Y, Damborsky, J, Wilce, M.C.J.
Deposit date:2000-10-27
Release date:2001-10-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Exploring the structure and activity of haloalkane dehalogenase from Sphingomonas paucimobilis UT26: evidence for product- and water-mediated inhibition.
Biochemistry, 41, 2002
1G5F
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STRUCTURE OF LINB COMPLEXED WITH 1,2-DICHLOROETHANE
Descriptor: 1,2-DICHLOROETHANE, 1,3,4,6-TETRACHLORO-1,4-CYCLOHEXADIENE HYDROLASE, CALCIUM ION, ...
Authors:Oakley, A.J, Prokop, Z, Bohac, M, Kmunicek, J, Jedlicka, T, Monincova, M, Kuta-Smatanova, I, Nagata, Y, Damborsky, J, Wilce, M.C.J.
Deposit date:2000-11-01
Release date:2001-11-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Exploring the structure and activity of haloalkane dehalogenase from Sphingomonas paucimobilis UT26: evidence for product- and water-mediated inhibition.
Biochemistry, 41, 2002
4H7E
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Crystal structure of haloalkane dehalogenase LinB V112A mutant from Sphingobium sp. MI1205
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Okai, M, Ohtsuka, J, Imai, L.F, Mase, T, Moriuchi, R, Tsuda, M, Nagata, K, Nagata, Y, Tanokura, M.
Deposit date:2012-09-20
Release date:2013-06-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure and Site-Directed Mutagenesis Analyses of Haloalkane Dehalogenase LinB from Sphingobium sp. Strain MI1205.
J.Bacteriol., 195, 2013
4H7F
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Crystal structure of haloalkane dehalogenase LinB V134I mutant from Sphingobium sp. MI1205
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Okai, M, Ohtsuka, J, Imai, L.F, Mase, T, Moriuchi, R, Tsuda, M, Nagata, K, Nagata, Y, Tanokura, M.
Deposit date:2012-09-20
Release date:2013-06-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure and Site-Directed Mutagenesis Analyses of Haloalkane Dehalogenase LinB from Sphingobium sp. Strain MI1205.
J.Bacteriol., 195, 2013
4H77
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Crystal structure of haloalkane dehalogenase LinB from Sphingobium sp. MI1205
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Okai, M, Ohtsuka, J, Imai, F.L, Mase, T, Moriuchi, R, Tsuda, M, Nagata, K, Nagata, Y, Tanokura, M.
Deposit date:2012-09-20
Release date:2013-06-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure and Site-Directed Mutagenesis Analyses of Haloalkane Dehalogenase LinB from Sphingobium sp. Strain MI1205.
J.Bacteriol., 195, 2013
4H7J
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Crystal structure of haloalkane dehalogenase LinB H247A mutant from Sphingobium sp. MI1205
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Okai, M, Ohtsuka, J, Imai, L.F, Mase, T, Moriuchi, R, Tsuda, M, Nagata, K, Nagata, Y, Tanokura, M.
Deposit date:2012-09-20
Release date:2013-06-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure and Site-Directed Mutagenesis Analyses of Haloalkane Dehalogenase LinB from Sphingobium sp. Strain MI1205.
J.Bacteriol., 195, 2013
4H7K
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Crystal structure of haloalkane dehalogenase LinB I253M mutant from Sphingobium sp. MI1205
Descriptor: CALCIUM ION, CHLORIDE ION, Haloalkane dehalogenase
Authors:Okai, M, Ohtsuka, J, Imai, L.F, Mase, T, Moriuchi, R, Tsuda, M, Nagata, K, Nagata, Y, Tanokura, M.
Deposit date:2012-09-20
Release date:2013-06-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure and Site-Directed Mutagenesis Analyses of Haloalkane Dehalogenase LinB from Sphingobium sp. Strain MI1205.
J.Bacteriol., 195, 2013
4H7H
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Crystal structure of haloalkane dehalogenase LinB T135A mutant from Sphingobium sp. MI1205
Descriptor: CALCIUM ION, CHLORIDE ION, Haloalkane dehalogenase
Authors:Okai, M, Ohtsuka, J, Imai, L.F, Mase, T, Moriuchi, R, Tsuda, M, Nagata, K, Nagata, Y, Tanokura, M.
Deposit date:2012-09-20
Release date:2013-06-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure and Site-Directed Mutagenesis Analyses of Haloalkane Dehalogenase LinB from Sphingobium sp. Strain MI1205.
J.Bacteriol., 195, 2013
4H7D
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BU of 4h7d by Molmil
Crystal structure of haloalkane dehalogenase LinB T81A mutant from Sphingobium sp. MI1205
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Okai, M, Ohtsuka, J, Imai, L.F, Mase, T, Moriuchi, R, Tsuda, M, Nagata, K, Nagata, Y, Tanokura, M.
Deposit date:2012-09-20
Release date:2013-06-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure and Site-Directed Mutagenesis Analyses of Haloalkane Dehalogenase LinB from Sphingobium sp. Strain MI1205.
J.Bacteriol., 195, 2013
4H7I
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Crystal structure of haloalkane dehalogenase LinB L138I mutant from Sphingobium sp. MI1205
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Okai, M, Ohtsuka, J, Imai, L.F, Mase, T, Moriuchi, R, Tsuda, M, Nagata, K, Nagata, Y, Tanokura, M.
Deposit date:2012-09-20
Release date:2013-06-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure and Site-Directed Mutagenesis Analyses of Haloalkane Dehalogenase LinB from Sphingobium sp. Strain MI1205.
J.Bacteriol., 195, 2013
1IUC
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BU of 1iuc by Molmil
Fucose-specific lectin from Aleuria aurantia with three ligands
Descriptor: Fucose-specific lectin, SULFATE ION, alpha-L-fucopyranose, ...
Authors:Fujihashi, M, Peapus, D.H, Kamiya, N, Nagata, Y, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-03-01
Release date:2003-09-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal Structure of Fucose-Specific Lectin from Aleuria aurantia Binding Ligands at Three of Its Five Sugar Recognition Sites
Biochemistry, 42, 2003
1IUB
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Fucose-specific lectin from Aleuria aurantia (Hg-derivative form)
Descriptor: CHLORIDE ION, Fucose-specific lectin, MERCURY (II) ION, ...
Authors:Fujihashi, M, Peapus, D.H, Kamiya, N, Nagata, Y, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-03-01
Release date:2003-09-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal Structure of Fucose-Specific Lectin from Aleuria aurantia Binding Ligands at Three of Its Five Sugar Recognition Sites
Biochemistry, 42, 2003
3A76
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The crystal structure of LinA
Descriptor: GLYCEROL, Gamma-hexachlorocyclohexane dehydrochlorinase, SPERMIDINE
Authors:Okai, M, Kubota, K, Fukuda, M, Nagata, Y, Nagata, K, Tanokura, M.
Deposit date:2009-09-15
Release date:2010-09-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of g-hexachlorocyclohexane dehydrochlorinase LinA from Sphingobium japonicum UT26
J.Mol.Biol., 2010
4K2A
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BU of 4k2a by Molmil
Crystal structure of haloalkane dehalogenase DbeA from Bradyrhizobium elkani USDA94
Descriptor: ACETATE ION, CHLORIDE ION, Haloalkane dehalogenase
Authors:Prudnikova, T, Chaloupkova, R, Rezacova, P, Mozga, T, Koudelakova, T, Sato, Y, Kuty, M, Nagata, Y, Damborsky, J, Kuta Smatanova, I, Structure 2 Function Project (S2F)
Deposit date:2013-04-08
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional analysis of a novel haloalkane dehalogenase with two halide-binding sites.
Acta Crystallogr.,Sect.D, 70, 2014
2V9Z
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BU of 2v9z by Molmil
Structure of the Rhodococcus haloalkane dehalogenase mutant with enhanced enantioselectivity
Descriptor: HALOALKANE DEHALOGENASE
Authors:Koudelakova, T, Prokop, Z, Sato, Y, Lapkouski, M, Chovancova, E, Monincova, M, Jesenska, A, Emmer, J, Senda, T, Nagata, Y, Kuta Smatanova, I, Damborsky, J.
Deposit date:2007-08-28
Release date:2008-09-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Rational Engineering of Rhodococcus Haloalkane Dehalogenase with Enhanced Enantioselectivity
To be Published
2D05
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BU of 2d05 by Molmil
Chitosanase From Bacillus circulans mutant K218P
Descriptor: Chitosanase, SULFATE ION
Authors:Fukamizo, T, Amano, S, Yamaguchi, K, Yoshikawa, T, Katsumi, T, Saito, J, Suzuki, M, Miki, K, Nagata, Y, Ando, A.
Deposit date:2005-07-25
Release date:2005-12-06
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bacillus circulans MH-K1 Chitosanase: Amino Acid Residues Responsible for Substrate Binding
J.Biochem.(Tokyo), 138, 2005
1K6E
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BU of 1k6e by Molmil
COMPLEX OF HYDROLYTIC HALOALKANE DEHALOGENASE LINB FROM SPHINGOMONAS PAUCIMOBILIS UT26 WITH 1,2-PROPANEDIOL (PRODUCT OF DEHALOGENATION OF 1,2-DIBROMOPROPANE) AT 1.85A
Descriptor: 1-BROMOPROPANE-2-OL, BROMIDE ION, CHLORIDE ION, ...
Authors:Streltsov, V.A, Prokop, Z, Damborsky, J, Nagata, Y, Oakley, A, Wilce, M.C.J.
Deposit date:2001-10-16
Release date:2003-08-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26: X-ray crystallographic studies of dehalogenation of brominated substrates.
Biochemistry, 42, 2003
1V4T
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Crystal structure of human glucokinase
Descriptor: SODIUM ION, SULFATE ION, glucokinase isoform 2
Authors:Kamata, K, Mitsuya, M, Nishimura, T, Eiki, J, Nagata, Y.
Deposit date:2003-11-19
Release date:2004-03-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural basis for allosteric regulation of the monomeric allosteric enzyme human glucokinase
Structure, 12, 2004
1V4S
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Crystal structure of human glucokinase
Descriptor: 2-AMINO-4-FLUORO-5-[(1-METHYL-1H-IMIDAZOL-2-YL)SULFANYL]-N-(1,3-THIAZOL-2-YL)BENZAMIDE, SODIUM ION, alpha-D-glucopyranose, ...
Authors:Kamata, K, Mitsuya, M, Nishimura, T, Eiki, J, Nagata, Y.
Deposit date:2003-11-19
Release date:2004-03-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for allosteric regulation of the monomeric allosteric enzyme human glucokinase
Structure, 12, 2004
6XY9
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Crystal structure of haloalkane dehalogenase DbeA-M1 loop variant from Bradyrhizobium elkanii
Descriptor: ACETATE ION, CHLORIDE ION, Haloalkane dehalogenase
Authors:Prudnikova, T, Rezacova, P, Kuta Smatanova, I, Chaloupkova, R, Damborsky, J.
Deposit date:2020-01-29
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and catalytic effects of surface loop-helix transplantation within haloalkane dehalogenase family.
Comput Struct Biotechnol J, 18, 2020
3GOI
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Human glucokinase in complex with a synthetic activator
Descriptor: 2-(methylamino)-N-(4-methyl-1,3-thiazol-2-yl)-5-[(4-methyl-4H-1,2,4-triazol-3-yl)sulfanyl]benzamide, Glucokinase, alpha-D-glucopyranose
Authors:Kamata, K, Mitsuya, M.
Deposit date:2009-03-19
Release date:2009-04-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Discovery of novel 3,6-disubstituted 2-pyridinecarboxamide derivatives as GK activators
Bioorg.Med.Chem.Lett., 19, 2009

 

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