Author results

2A1M
  • Download 2a1m
  • View 2a1m
Molmil generated image of 2a1m
CRYSTAL STRUCTURE OF FERROUS DIOXYGEN COMPLEX OF WILD-TYPE CYTOCHROME P450CAM
Descriptor:Cytochrome P450-cam, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Nagano, S., Poulos, T.L.
Deposit date:2005-06-20
Release date:2005-07-05
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic study on the dioxygen complex of wild-type and mutant cytochrome P450cam. Implications for the dioxygen activation mechanism
J.Biol.Chem., 280, 2005
2A1N
  • Download 2a1n
  • View 2a1n
Molmil generated image of 2a1n
CRYSTAL STRUCTURE OF FERROUS DIOXYGEN COMPLEX OF D251N CYTOCHROME P450CAM
Descriptor:Cytochrome P450-cam, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Nagano, S., Poulos, T.L.
Deposit date:2005-06-20
Release date:2005-07-05
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic study on the dioxygen complex of wild-type and mutant cytochrome P450cam. Implications for the dioxygen activation mechanism
J.Biol.Chem., 280, 2005
2A1O
  • Download 2a1o
  • View 2a1o
Molmil generated image of 2a1o
CRYSTAL STRUCTURE OF FERROUS DIOXYGEN COMPLEX OF T252A CYTOCHROME P450CAM
Descriptor:Cytochrome P450-cam, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Nagano, S., Poulos, T.L.
Deposit date:2005-06-20
Release date:2005-07-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystallographic study on the dioxygen complex of wild-type and mutant cytochrome P450cam. Implications for the dioxygen activation mechanism
J.Biol.Chem., 280, 2005
1IWI
  • Download 1iwi
  • View 1iwi
Molmil generated image of 1iwi
PUTIDAREDOXIN-BINDING STABLILIZES AN ACTIVE CONFORMER OF CYTOCHROME P450CAM IN ITS REDUCED STATE; CRYSTAL STRUCTURE OF CYTOCHROME P450CAM
Descriptor:CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE, CAMPHOR
Authors:Nagano, S., Shimada, H., Tarumi, A., Hishiki, T., Kimata-Ariga, Y., Egawa, T., Park, S.-Y., Adachi, S., Shiro, Y., Ishimura, Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-05-15
Release date:2002-06-05
Last modified:2019-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Infrared spectroscopic and mutational studies on putidaredoxin-induced conformational changes in ferrous CO-P450cam
Biochemistry, 42, 2003
1IWJ
  • Download 1iwj
  • View 1iwj
Molmil generated image of 1iwj
PUTIDAREDOXIN-BINDING STABLILIZES AN ACTIVE CONFORMER OF CYTOCHROME P450CAM IN ITS REDUCED STATE; CRYSTAL STRUCTURE OF MUTANT(109K) CYTOCHROME P450CAM
Descriptor:CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE, CAMPHOR
Authors:Nagano, S., Shimada, H., Tarumi, A., Hishiki, T., Kimata-Ariga, Y., Egawa, T., Park, S.-Y., Adachi, S., Shiro, Y., Ishimura, Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-05-15
Release date:2002-06-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Infrared spectroscopic and mutational studies on putidaredoxin-induced conformational changes in ferrous CO-P450cam
Biochemistry, 42, 2003
1IWK
  • Download 1iwk
  • View 1iwk
Molmil generated image of 1iwk
PUTIDAREDOXIN-BINDING STABLILIZES AN ACTIVE CONFORMER OF CYTOCHROME P450CAM IN ITS REDUCED STATE; CRYSTAL STRUCTURE OF MUTANT(112K) CYTOCHROME P450CAM
Descriptor:CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nagano, S., Shimada, H., Tarumi, A., Hishiki, T., Kimata-Ariga, Y., Egawa, T., Park, S.-Y., Adachi, S., Shiro, Y., Ishimura, Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-05-15
Release date:2002-06-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Infrared spectroscopic and mutational studies on putidaredoxin-induced conformational changes in ferrous CO-P450cam
Biochemistry, 42, 2003
1PKF
  • Download 1pkf
  • View 1pkf
Molmil generated image of 1pkf
CRYSTAL STRUCTURE OF EPOTHILONE D-BOUND CYTOCHROME P450EPOK
Descriptor:cytochrome p450EpoK, PROTOPORPHYRIN IX CONTAINING FE, EPOTHILONE D
Authors:Nagano, S., Li, H., Shimizu, H., Nishida, C., Ogura, H., Ortiz de Montellano, P.R., Poulos, T.L.
Deposit date:2003-06-05
Release date:2003-10-28
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of Epothilone D-bound, Epothilone B-bound, and Substrate-free Forms of Cytochrome P450epoK
J.Biol.Chem., 278, 2003
1Q5D
  • Download 1q5d
  • View 1q5d
Molmil generated image of 1q5d
EPOTHILONE B-BOUND CYTOCHROME P450EPOK
Descriptor:P450 epoxidase, PROTOPORPHYRIN IX CONTAINING FE, 7,11-DIHYDROXY-8,8,10,12,16-PENTAMETHYL-3-[1-METHYL-2-(2-METHYL-THIAZOL-4-YL)VINYL]-4,17-DIOXABICYCLO[14.1.0]HEPTADECANE-5,9-DIONE
Authors:Nagano, S., Li, H., Shimizu, H., Nishida, C., Ogura, H., Ortiz de Montellano, P.R., Poulos, T.L.
Deposit date:2003-08-06
Release date:2003-10-28
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structures of epothilone D-bound, epothilone B-bound, and substrate-free forms of cytochrome P450epoK
J.Biol.Chem., 278, 2003
1Q5E
  • Download 1q5e
  • View 1q5e
Molmil generated image of 1q5e
SUBSTRATE-FREE CYTOCHROME P450EPOK
Descriptor:P450 epoxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nagano, S., Li, H., Shimizu, H., Nishida, C., Ogura, H., Ortiz de Montellano, P.R., Poulos, T.L.
Deposit date:2003-08-06
Release date:2003-10-28
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structures of epothilone D-bound, epothilone B-bound, and substrate-free forms of cytochrome P450epoK
J.Biol.Chem., 278, 2003
1T85
  • Download 1t85
  • View 1t85
Molmil generated image of 1t85
CRYSTAL STRUCTURE OF THE FERROUS CO-BOUND CYTOCHROME P450CAM MUTANT (L358P/C334A)
Descriptor:Cytochrome P450-cam, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Nagano, S., Tosha, T., Ishimori, K., Morishima, I., Poulos, T.L.
Deposit date:2004-05-11
Release date:2004-06-01
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the cytochrome p450cam mutant that exhibits the same spectral perturbations induced by putidaredoxin binding.
J.Biol.Chem., 279, 2004
1T86
  • Download 1t86
  • View 1t86
Molmil generated image of 1t86
CRYSTAL STRUCTURE OF THE FERROUS CYTOCHROME P450CAM MUTANT (L358P/C334A)
Descriptor:Cytochrome P450-cam, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Nagano, S., Tosha, T., Ishimori, K., Morishima, I., Poulos, T.L.
Deposit date:2004-05-11
Release date:2004-05-25
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the cytochrome p450cam mutant that exhibits the same spectral perturbations induced by putidaredoxin binding.
J.Biol.Chem., 279, 2004
1T87
  • Download 1t87
  • View 1t87
Molmil generated image of 1t87
CRYSTAL STRUCTURE OF THE FERROUS CO-BOUND CYTOCHROME P450CAM (C334A)
Descriptor:Cytochrome P450-cam, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Nagano, S., Tosha, T., Ishimori, K., Morishima, I., Poulos, T.L.
Deposit date:2004-05-11
Release date:2004-05-25
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the cytochrome p450cam mutant that exhibits the same spectral perturbations induced by putidaredoxin binding.
J.Biol.Chem., 279, 2004
1T88
  • Download 1t88
  • View 1t88
Molmil generated image of 1t88
CRYSTAL STRUCTURE OF THE FERROUS CYTOCHROME P450CAM (C334A)
Descriptor:Cytochrome P450-cam, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Nagano, S., Tosha, T., Ishimori, K., Morishima, I., Poulos, T.L.
Deposit date:2004-05-11
Release date:2004-05-25
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the cytochrome p450cam mutant that exhibits the same spectral perturbations induced by putidaredoxin binding.
J.Biol.Chem., 279, 2004
1Z8O
  • Download 1z8o
  • View 1z8o
Molmil generated image of 1z8o
FERROUS DIOXYGEN COMPLEX OF THE WILD-TYPE CYTOCHROME P450ERYF
Descriptor:6-deoxyerythronolide B hydroxylase, PROTOPORPHYRIN IX CONTAINING FE, OXYGEN MOLECULE, ...
Authors:Nagano, S., Cupp-Vickery, J.R., Poulos, T.L.
Deposit date:2005-03-31
Release date:2005-04-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of the ferrous dioxygen complex of wild-type cytochrome P450eryF and its mutants, A245S and A245T: investigation of the proton transfer system in P450eryF.
J.Biol.Chem., 280, 2005
1Z8Q
  • Download 1z8q
  • View 1z8q
Molmil generated image of 1z8q
FERROUS DIOXYGEN COMPLEX OF THE A245T CYTOCHROME P450ERYF
Descriptor:6-deoxyerythronolide B hydroxylase, PROTOPORPHYRIN IX CONTAINING FE, OXYGEN MOLECULE, ...
Authors:Nagano, S., Cupp-Vickery, J.R., Poulos, T.L.
Deposit date:2005-03-31
Release date:2005-04-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the ferrous dioxygen complex of wild-type cytochrome P450eryF and its mutants, A245S and A245T: investigation of the proton transfer system in P450eryF.
J.Biol.Chem., 280, 2005
5HSQ
  • Download 5hsq
  • View 5hsq
Molmil generated image of 5hsq
THE SURFACE ENGINEERED PHOTOSENSORY MODULE (PAS-GAF-PHY) OF THE BACTERIAL PHYTOCHROME AGP1 (ATBPHP1) IN THE PR FORM, CHROMOPHORE MODELLED WITH AN ENDOCYCLIC DOUBLE BOND IN PYRROLE RING A.
Descriptor:Bacteriophytochrome protein, BILIVERDINE IX ALPHA, CALCIUM ION, ...
Authors:Nagano, S., Scheerer, P., Zubow, K., Lamparter, T., Krauss, N.
Deposit date:2016-01-26
Release date:2016-08-03
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Crystal Structures of the N-terminal Photosensory Core Module of Agrobacterium Phytochrome Agp1 as Parallel and Anti-parallel Dimers.
J.Biol.Chem., 291, 2016
5I5L
  • Download 5i5l
  • View 5i5l
Molmil generated image of 5i5l
THE PHOTOSENSORY MODULE (PAS-GAF-PHY) OF THE BACTERIAL PHYTOCHROME AGP1 (ATBPHP1) IN THE PR FORM, CHROMOPHORE MODELLED WITH AN ENDOCYCLIC DOUBLE BOND IN PYRROLE RING A
Descriptor:Bacteriophytochrome protein, BILIVERDINE IX ALPHA, CALCIUM ION, ...
Authors:Nagano, S., Scheerer, P., Zubow, K., Lamparter, T., Krauss, N.
Deposit date:2016-02-15
Release date:2016-08-03
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Crystal Structures of the N-terminal Photosensory Core Module of Agrobacterium Phytochrome Agp1 as Parallel and Anti-parallel Dimers.
J.Biol.Chem., 291, 2016
6TBY
  • Download 6tby
  • View 6tby
Molmil generated image of 6tby
PHYCOCYANOBILIN-ADDUCTED PAS-GAF BIDOMAIN OF SORGHUM BICOLOR PHYB
Descriptor:Phytochrome, PHYCOCYANOBILIN, GLYCEROL, ...
Authors:Nagano, S., Guan, K., Shenkutie, S.M., Hughes, J.E.
Deposit date:2019-11-04
Release date:2020-05-06
Last modified:2020-05-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into photoactivation and signalling in plant phytochromes.
Nat.Plants, 6, 2020
6TC5
  • Download 6tc5
  • View 6tc5
Molmil generated image of 6tc5
PHYTOCHROMOBILIN-ADDUCTED PAS-GAF BIDOMAIN OF SORGHUM BICOLOR PHYB
Descriptor:Phytochrome, 3-[5-[[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, BETA-MERCAPTOETHANOL
Authors:Nagano, S., Guan, K., Shenkutie, S.M., Hughes, J.E.
Deposit date:2019-11-05
Release date:2020-05-06
Last modified:2020-05-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into photoactivation and signalling in plant phytochromes.
Nat.Plants, 6, 2020
6TC7
  • Download 6tc7
  • View 6tc7
Molmil generated image of 6tc7
PAS-GAF BIDOMAIN OF GLYCINE MAX PHYTOCHROMEA
Descriptor:Phytochrome, PHYCOCYANOBILIN, DI(HYDROXYETHYL)ETHER
Authors:Nagano, S., Guan, K., Shenkutie, S.M., Hughes, J.E.
Deposit date:2019-11-05
Release date:2020-05-06
Last modified:2020-05-27
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structural insights into photoactivation and signalling in plant phytochromes.
Nat.Plants, 6, 2020
6TL4
  • Download 6tl4
  • View 6tl4
Molmil generated image of 6tl4
PHOTOSENSORY MODULE (PAS-GAF-PHY) OF GLYCINE MAX PHYB
Descriptor:Phytochrome, PHYCOCYANOBILIN
Authors:Nagano, S., Guan, K., Shenkutie, S.M., Hughes, J.E.
Deposit date:2019-12-01
Release date:2020-05-06
Last modified:2020-05-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural insights into photoactivation and signalling in plant phytochromes.
Nat.Plants, 6, 2020
3WVS
  • Download 3wvs
  • View 3wvs
Molmil generated image of 3wvs
CRYSTAL STRUCTURE OF CYTOCHROME P450REVI
Descriptor:Putative monooxygenase, PROTOPORPHYRIN IX CONTAINING FE, (2E,4S,5S,6E,8E)-10-{(2R,3S,6S,8R,9S)-9-butyl-8-[(1E,3E)-4-carboxy-3-methylbuta-1,3-dien-1-yl]-3-methyl-1,7-dioxaspiro[5.5]undec-2-yl}-5-hydroxy-4,8-dimethyldeca-2,6,8-trienoic acid, ...
Authors:Nagano, S., Takahashi, S., Osada, H., Shiro, Y.
Deposit date:2014-06-06
Release date:2014-10-01
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-Function Analyses of Cytochrome P450revI Involved in Reveromycin A Biosynthesis and Evaluation of the Biological Activity of Its Substrate, Reveromycin T
J.Biol.Chem., 2014
4Y1Q
  • Download 4y1q
  • View 4y1q
Molmil generated image of 4y1q
CRYSTAL STRUCTURE OF HASA MUTANT Y75A MONOMER FROM YERSINIA PSEUDOTUBERCULOSIS
Descriptor:Extracellular heme acquisition hemophore HasA, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nagano, S., Hino, T., Kanadani, M., Ozaki, S., Sato, T.
Deposit date:2015-02-08
Release date:2015-08-12
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The crystal structure of heme acquisition system A from Yersinia pseudotuberculosis (HasAypt): Roles of the axial ligand Tyr75 and two distal arginines in heme binding
J.Inorg.Biochem., 151, 2015
1Z8P
  • Download 1z8p
  • View 1z8p
Molmil generated image of 1z8p
FERROUS DIOXYGEN COMPLEX OF THE A245S CYTOCHROME P450ERYF
Descriptor:6-deoxyerythronolide B hydroxylase, PROTOPORPHYRIN IX CONTAINING FE, OXYGEN MOLECULE, ...
Authors:Poulos, T.L., Nagano, S.
Deposit date:2005-03-31
Release date:2005-04-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of the ferrous dioxygen complex of wild-type cytochrome P450eryF and its mutants, A245S and A245T: investigation of the proton transfer system in P450eryF.
J.Biol.Chem., 280, 2005
2Z3U
  • Download 2z3u
  • View 2z3u
Molmil generated image of 2z3u
CRYSTAL STRUCTURE OF CHROMOPYRROLIC ACID BOUND CYTOCHROME P450 STAP (CYP245A1)
Descriptor:Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE, 3,4-DI-1H-INDOL-3-YL-1H-PYRROLE-2,5-DICARBOXYLIC ACID, ...
Authors:Makino, M., Sugimoto, H., Shiro, Y., Asamizu, S., Onaka, H., Nagano, S.
Deposit date:2007-06-06
Release date:2007-07-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures and catalytic mechanism of cytochrome P450 StaP that produces the indolocarbazole skeleton
Proc.Natl.Acad.Sci.Usa, 104, 2007
<123>