1BHI | | STRUCTURE OF TRANSACTIVATION DOMAIN OF CRE-BP1/ATF-2, NMR, 20 STRUCTURES | | Descriptor: | CRE-BP1 | | Authors: | Nagadoi, A., Nakazawa, K., Uda, H., Maekawa, T., Ishii, S., Nishimura, Y. | | Deposit date: | 1998-06-09 | | Release date: | 1999-06-15 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the transactivation domain of ATF-2 comprising a zinc finger-like subdomain and a flexible subdomain.
J.Mol.Biol., 287, 1999
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1PRU | | PURINE REPRESSOR DNA-BINDING DOMAIN DNA BINDING | | Descriptor: | PURINE REPRESSOR | | Authors: | Nagadoi, A., Morikawa, S., Nakamura, H., Enari, M., Kobayashi, K., Yamamoto, H., Sampei, G., Mizobuchi, K., Schumacher, M.A., Brennan, R.G., Nishimura, Y. | | Deposit date: | 1995-05-08 | | Release date: | 1996-03-08 | | Last modified: | 2012-02-22 | | Method: | SOLUTION NMR | | Cite: | Structural comparison of the free and DNA-bound forms of the purine repressor DNA-binding domain.
Structure, 3, 1995
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1PRV | | PURINE REPRESSOR DNA-BINDING DOMAIN DNA BINDING | | Descriptor: | PURINE REPRESSOR | | Authors: | Nagadoi, A., Morikawa, S., Nakamura, H., Enari, M., Kobayashi, K., Yamamoto, H., Sampei, G., Mizobuchi, K., Schumacher, M.A., Brennan, R.G., Nishimura, Y. | | Deposit date: | 1995-05-08 | | Release date: | 1996-03-08 | | Last modified: | 2012-02-22 | | Method: | SOLUTION NMR | | Cite: | Structural comparison of the free and DNA-bound forms of the purine repressor DNA-binding domain.
Structure, 3, 1995
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1VD4 | | SOLUTION STRUCTURE OF THE ZINC FINGER DOMAIN OF TFIIE ALPHA | | Descriptor: | Transcription initiation factor IIE, alpha subunit, ZINC ION | | Authors: | Okuda, M., Tanaka, A., Arai, Y., Satoh, M., Okamura, H., Nagadoi, A., Hanaoka, F., Ohkuma, Y., Nishimura, Y. | | Deposit date: | 2004-03-18 | | Release date: | 2004-10-05 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | A novel zinc finger structure in the large subunit of human general transcription factor TFIIE.
J.Biol.Chem., 279, 2004
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1BA5 | | DNA-BINDING DOMAIN OF HUMAN TELOMERIC PROTEIN, HTRF1, NMR, 18 STRUCTURES | | Descriptor: | HTRF1 | | Authors: | Nishikawa, T., Nagadoi, A., Yoshimura, S., Aimoto, S., Nishimura, Y. | | Deposit date: | 1998-04-22 | | Release date: | 1999-04-27 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the DNA-binding domain of human telomeric protein, hTRF1.
Structure, 6, 1998
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1ITY | | SOLUTION STRUCTURE OF THE DNA BINDING DOMAIN OF HUMAN TRF1 | | Descriptor: | TRF1 | | Authors: | Nishikawa, T., Okamura, H., Nagadoi, A., Konig, P., Rhodes, D., Nishimura, Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2002-02-15 | | Release date: | 2002-03-06 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Solution structure of a telomeric DNA complex of human TRF1
Structure, 9, 2001
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1IV6 | | SOLUTION STRUCTURE OF THE DNA COMPLEX OF HUMAN TRF1 | | Descriptor: | 5'-D(*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3', 5'-D(*CP*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP*C)-3', TELOMERIC REPEAT BINDING FACTOR 1 | | Authors: | Nishikawa, T., Okamura, H., Nagadoi, A., Konig, P., Rhodes, D., Nishimura, Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2002-03-14 | | Release date: | 2002-04-17 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Solution structure of a telomeric DNA complex of human TRF1.
Structure, 9, 2001
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1QQI | | SOLUTION STRUCTURE OF THE DNA-BINDING AND TRANSACTIVATION DOMAIN OF PHOB FROM ESCHERICHIA COLI | | Descriptor: | PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN PHOB | | Authors: | Okamura, H., Hanaoka, S., Nagadoi, A., Makino, K., Nishimura, Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 1999-06-07 | | Release date: | 2000-06-07 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Structural comparison of the PhoB and OmpR DNA-binding/transactivation domains and the arrangement of PhoB molecules on the phosphate box.
J.Mol.Biol., 295, 2000
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2RVQ | | SOLUTION STRUCTURE OF THE ISOLATED HISTONE H2A-H2B HETERODIMER | | Descriptor: | Histone H2A type 1-B/E, Histone H2B type 1-J | | Authors: | Moriwaki, Y., Yamane, T., Ohtomo, H., Ikeguchi, M., Kurita, J., Sato, M., Nagadoi, A., Shimojo, H., Nishimura, Y. | | Deposit date: | 2016-03-28 | | Release date: | 2016-05-25 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the isolated histone H2A-H2B heterodimer
Sci Rep, 6, 2016
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1FEX | |
1VF9 | | SOLUTION STRUCTURE OF HUMAN TRF2 | | Descriptor: | Telomeric repeat binding factor 2 | | Authors: | Nishimura, Y., Hanaoka, S. | | Deposit date: | 2004-04-12 | | Release date: | 2005-05-17 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Comparison between TRF2 and TRF1 of their telomeric DNA-bound structures and DNA-binding activities
Protein Sci., 14, 2005
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1VFC | | SOLUTION STRUCTURE OF THE DNA COMPLEX OF HUMAN TRF2 | | Descriptor: | Short G-rich strand, Short C-rich starnd, Telomeric repeat binding factor 2 | | Authors: | Nishimura, Y., Hanaoka, S. | | Deposit date: | 2004-04-12 | | Release date: | 2005-05-17 | | Last modified: | 2011-07-13 | | Method: | SOLUTION NMR | | Cite: | Comparison between TRF2 and TRF1 of their telomeric DNA-bound structures and DNA-binding activities
Protein Sci., 14, 2005
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2N5U | |
3X1W | | RAS-RELATED PROTEIN RAP1B WITH GDP | | Descriptor: | Ras-related protein Rap-1b, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... | | Authors: | Noguchi, H., Ikegami, T., Akashi, S., Park, S.Y., Tame, J.R.H., Unzai, S. | | Deposit date: | 2014-12-02 | | Release date: | 2015-06-03 | | Method: | X-RAY DIFFRACTION (1.2 Å) | | Cite: | The structure and conformational switching of Rap1B
Biochem.Biophys.Res.Commun., 462, 2015
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3X1X | | RAS-RELATED PROTEIN RAP1B WITH GPPNHP | | Descriptor: | Ras-related protein Rap-1b, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, MAGNESIUM ION, ... | | Authors: | Noguchi, H., Ikegami, T., Park, S.Y., Tame, J.R.H., Unzai, S. | | Deposit date: | 2014-12-02 | | Release date: | 2015-06-03 | | Method: | X-RAY DIFFRACTION (1 Å) | | Cite: | The structure and conformational switching of Rap1B
Biochem.Biophys.Res.Commun., 462, 2015
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3X1Y | | RAS-RELATED PROTEIN RAP1B(L9V) WITH GPPNHP | | Descriptor: | Ras-related protein Rap-1b, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, MAGNESIUM ION, ... | | Authors: | Noguchi, H., Ikegami, T., Park, S.Y., Tame, J.R.H., Unzai, S. | | Deposit date: | 2014-12-02 | | Release date: | 2015-06-03 | | Method: | X-RAY DIFFRACTION (1.168 Å) | | Cite: | The structure and conformational switching of Rap1B
Biochem.Biophys.Res.Commun., 462, 2015
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3X1Z | | RAS-RELATED PROTEIN RAP1B(T65A) WITH GPPNHP | | Descriptor: | Ras-related protein Rap-1b, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, MAGNESIUM ION, ... | | Authors: | Noguchi, H., Ikegami, T., Park, S.Y., Tame, J.R.H., Unzai, S. | | Deposit date: | 2014-12-02 | | Release date: | 2015-06-03 | | Method: | X-RAY DIFFRACTION (1.25 Å) | | Cite: | The structure and conformational switching of Rap1B
Biochem.Biophys.Res.Commun., 462, 2015
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