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5ZWL
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CRYSTAL STRUCTURE OF THE GAMMA - EPSILON COMPLEX OF PHOTOSYNTHETIC CYANOBACTERIAL F1-ATPASE
Descriptor:ATP synthase epsilon chain, ATP synthase gamma chain
Authors:Murakami, S., Yamashita, E., Hisabori, T.
Deposit date:2018-05-16
Release date:2018-09-26
Last modified:2018-10-03
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure of the gamma-epsilon complex of cyanobacterial F1-ATPase reveals a suppression mechanism of the gamma subunit on ATP hydrolysis in phototrophs.
Biochem. J., 475, 2018
1IWG
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CRYSTAL STRUCTURE OF BACTERIAL MULTIDRUG EFFLUX TRANSPORTER ACRB
Descriptor:AcrB
Authors:Murakami, S., Nakashima, R., Yamashita, E., Yamaguchi, A.
Deposit date:2002-05-15
Release date:2002-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structure of bacterial multidrug efflux transporter AcrB
NATURE, 419, 2002
2DHH
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CRYSTAL STRUCTURE OF A MULTIDRUG TRANSPORTER REVEAL A FUNCTIONALLY ROTATING MECHANISM
Descriptor:ACRB
Authors:Murakami, S., Nakashima, R., Yamashita, E., Matsumoto, T.
Deposit date:2006-03-23
Release date:2006-08-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of a multidrug transporter reveal a functionally rotating mechanism
Nature, 443, 2006
2DR6
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CRYSTAL STRUCTURE OF A MULTIDRUG TRANSPORTER REVEAL A FUNCTIONALLY ROTATING MECHANISM
Descriptor:ACRB, DOXORUBICIN
Authors:Murakami, S., Nakashima, R., Yamashita, E., Matsumoto, T.
Deposit date:2006-06-08
Release date:2006-08-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structures of a multidrug transporter reveal a functionally rotating mechanism
Nature, 443, 2006
2DRD
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CRYSTAL STRUCTURE OF A MULTIDRUG TRANSPORTER REVEAL A FUNCTIONALLY ROTATING MECHANISM
Descriptor:ACRB, (4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE
Authors:Murakami, S., Nakashima, R., Yamashita, E., Matsumoto, T.
Deposit date:2006-06-08
Release date:2006-08-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structures of a multidrug transporter reveal a functionally rotating mechanism
Nature, 443, 2006
5GKO
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CRYSTAL STRUCTURE OF TRIPARTITE-TYPE ABC TRANSPORTER, MACB FROM ACINETOBACTER BAUMANNII
Descriptor:Macrolide export ATP-binding/permease protein MacB
Authors:Murakami, S., Okada, U., Yamashita, E.
Deposit date:2016-07-04
Release date:2017-11-15
Method:X-RAY DIFFRACTION (3.393 Å)
Cite:Crystal structure of tripartite-type ABC transporter MacB from Acinetobacter baumannii
Nat Commun, 8, 2017
5WS4
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CRYSTAL STRUCTURE OF TRIPARTITE-TYPE ABC TRANSPORTER MACB FROM ACINETOBACTER BAUMANNII
Descriptor:Macrolide export ATP-binding/permease protein MacB, 5'-O-[(R)-HYDROXY(THIOPHOSPHONOOXY)PHOSPHORYL]ADENOSINE
Authors:Murakami, S., Okada, U., Yamashita, E.
Deposit date:2016-12-05
Release date:2017-11-15
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structure of tripartite-type ABC transporter MacB from Acinetobacter baumannii
Nat Commun, 8, 2017
3AGV
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CRYSTAL STRUCTURE OF A HUMAN IGG-APTAMER COMPLEX
Descriptor:Ig gamma-1 chain C region, 5'-R(*GP*GP*AP*GP*GP*(UFT)P*GP*(CFZ)P*(UFT)P*(CFZ)P*(CFZ)P*GP*AP*AP*A*GP*GP*AP*AP*(CFZ)P*(UFT)P*(CFZ)P*(CFZ)P*A)-3', ALPHA-D-MANNOSE, ...
Authors:Nomura, Y., Sugiyama, S., Sakamoto, T., Miyakawa, S., Adachi, H., Takano, K., Murakami, S., Inoue, T., Mori, Y., Nakamura, Y., Matsumura, H.
Deposit date:2010-04-08
Release date:2010-11-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Conformational plasticity of RNA for target recognition as revealed by the 2.15 A crystal structure of a human IgG-aptamer complex
Nucleic Acids Res., 38, 2010
3WBG
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STRUCTURE OF THE HUMAN HEART FATTY ACID-BINDING PROTEIN IN COMPLEX WITH 1-ANILINONAPHTALENE-8-SULPHONIC ACID
Descriptor:Fatty acid-binding protein, heart, 8-ANILINO-1-NAPHTHALENE SULFONATE
Authors:Hirose, M., Sugiyama, S., Ishida, H., Niiyama, M., Matsuoka, D., Hara, T., Sato, F., Mizohata, E., Murakami, S., Inoue, T., Matsuoka, S., Murata, M.
Deposit date:2013-05-16
Release date:2013-10-30
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of the human-heart fatty-acid-binding protein 3 in complex with the fluorescent probe 1-anilinonaphthalene-8-sulphonic acid
J.SYNCHROTRON RADIAT., 20, 2013
3WR7
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CRYSTAL STRUCTURE OF SPERMIDINE ACETYLTRANSFERASE FROM ESCHERICHIA COLI
Descriptor:Spermidine N1-acetyltransferase, SPERMIDINE, COENZYME A
Authors:Sugiyama, S., Ishikawa, S., Tomitori, S., Niiyama, M., Hirose, M., Miyazaki, Y., Higashi, K., Adachi, H., Takano, K., Murakami, S., Inoue, T., Mori, Y., Kashiwagi, K., Igarashi, K., Matsumura, H.
Deposit date:2014-02-20
Release date:2015-09-02
Last modified:2016-06-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular mechanism underlying promiscuous polyamine recognition by spermidine acetyltransferase
Int.J.Biochem.Cell Biol., 76, 2016
3WVM
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THE 0.88 ANGSTROM X-RAY STRUCTURE OF THE HUMAN HEART FATTY ACID-BINDING PROTEIN COMPLEXED WITH STEARIC ACID
Descriptor:Fatty acid-binding protein, heart, STEARIC ACID, ...
Authors:Sugiyama, S., Matsuoka, S., Mizohata, E., Matsuoka, D., Ishida, H., Hirose, M., Kakinouchi, K., Hara, T., Matsumura, H., Murakami, S., Inoue, T., Murata, M.
Deposit date:2014-05-25
Release date:2015-01-28
Method:X-RAY DIFFRACTION (0.88 Å)
Cite:Water-Mediated Recognition of Simple Alkyl Chains by Heart-Type Fatty-Acid-Binding Protein
Angew.Chem.Int.Ed.Engl., 2014
4TJZ
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THE 0.87 ANGSTROM X-RAY STRUCTURE OF THE HUMAN HEART FATTY ACID-BINDING PROTEIN COMPLEXED WITH CAPRIC ACID
Descriptor:Fatty acid-binding protein, heart, DECANOIC ACID, ...
Authors:Sugiyama, S., Matsuoka, S., Mizohata, E., Ishida, H., Hirose, M., Kakinouchi, K., Hara, T., Murakami, S., Inoue, T., Murata, M.
Deposit date:2014-05-25
Release date:2015-01-28
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (0.87 Å)
Cite:Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein
Angew.Chem.Int.Ed.Engl., 54, 2015
4TKB
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THE 0.86 ANGSTROM X-RAY STRUCTURE OF THE HUMAN HEART FATTY ACID-BINDING PROTEIN COMPLEXED WITH LAURIC ACID
Descriptor:Fatty acid-binding protein, heart, LAURIC ACID, ...
Authors:Sugiyama, S., Matsuoka, S., Mizohata, E., Matsuoka, D., Ishida, H., Hirose, M., Kakinouchi, K., Hara, T., Murakami, S., Inoue, T., Murata, M.
Deposit date:2014-05-26
Release date:2015-01-28
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (0.86 Å)
Cite:Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein
Angew.Chem.Int.Ed.Engl., 54, 2015
4TKH
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THE 0.93 ANGSTROM X-RAY STRUCTURE OF THE HUMAN HEART FATTY ACID-BINDING PROTEIN COMPLEXED WITH MYRISTIC ACID
Descriptor:Fatty acid-binding protein, heart, MYRISTIC ACID, ...
Authors:Sugiyama, S., Matsuoka, S., Mizohata, E., Matsuoka, D., Ishida, H., Hirose, M., Kakinouchi, K., Hara, T., Murakami, S., Inoue, T., Murata, M.
Deposit date:2014-05-26
Release date:2015-01-28
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein
Angew.Chem.Int.Ed.Engl., 54, 2015
4TKJ
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THE 0.87 ANGSTROM X-RAY STRUCTURE OF THE HUMAN HEART FATTY ACID-BINDING PROTEIN COMPLEXED WITH PALMITIC ACID
Descriptor:Fatty acid-binding protein, heart, PALMITIC ACID, ...
Authors:Sugiyama, S., Matsuoka, S., Mizohata, E., Matsuoka, D., Ishida, H., Hirose, M., Kakinouchi, K., Hara, T., Murakami, S., Inoue, T., Murata, M.
Deposit date:2014-05-26
Release date:2015-01-28
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (0.87 Å)
Cite:Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein
Angew.Chem.Int.Ed.Engl., 54, 2015
5AVD
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THE 0.86 ANGSTROM STRUCTURE OF ELASTASE CRYSTALLIZED IN HIGH-STRENGTH AGAROSE HYDROGEL
Descriptor:Chymotrypsin-like elastase family member 1, SULFATE ION
Authors:Sugiyama, S., Shimizu, N., Maruyama, M., Sazaki, G., Adachi, H., Takano, K., Murakami, S., Inoue, T., Mori, Y., Matsumura, H.
Deposit date:2015-06-15
Release date:2015-07-08
Method:X-RAY DIFFRACTION (0.86 Å)
Cite:Growth of protein crystals in hydrogels prevents osmotic shock
J.Am.Chem.Soc., 134, 2012
5AVG
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THE 0.95 ANGSTROM STRUCTURE OF THAUMATIN CRYSTALLIZED IN HIGH-STRENGTH AGAROSE HYDROGEL
Descriptor:Thaumatin-1
Authors:Sugiyama, S., Shimizu, N., Maruyama, M., Sazaki, G., Hirose, M., Adachi, H., Takano, K., Murakami, S., Inoue, T., Mori, Y., Matsumura, H.
Deposit date:2015-06-16
Release date:2015-07-08
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Growth of protein crystals in hydrogels prevents osmotic shock
J.Am.Chem.Soc., 134, 2012
5AVH
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THE 0.90 ANGSTROM STRUCTURE (I222) OF GLUCOSE ISOMERASE CRYSTALLIZED IN HIGH-STRENGTH AGAROSE HYDROGEL
Descriptor:Xylose isomerase
Authors:Sugiyama, S., Shimizu, N., Maruyama, N., Sazaki, G., Adachi, H., Takano, K., Murakami, S., Inoue, T., Mori, Y., Matsumura, H.
Deposit date:2015-06-16
Release date:2015-07-08
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Growth of protein crystals in hydrogels prevents osmotic shock
J.Am.Chem.Soc., 134, 2012
5AVN
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THE 1.03 ANGSTROM STRUCTURE (P212121) OF GLUCOSE ISOMERASE CRYSTALLIZED IN HIGH-STRENGTH AGAROSE HYDROGEL
Descriptor:Xylose isomerase, MANGANESE (II) ION, CALCIUM ION, ...
Authors:Sugiyama, S., Shimizu, N., Maruyama, N., Sazaki, G., Adachi, H., Takano, K., Murakami, S., Inoue, T., Mori, Y., Matsumura, H.
Deposit date:2015-06-23
Release date:2015-07-08
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Growth of protein crystals in hydrogels prevents osmotic shock
J.Am.Chem.Soc., 134, 2012
5NIK
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STRUCTURE OF THE MACAB-TOLC ABC-TYPE TRIPARTITE MULTIDRUG EFFLUX PUMP
Descriptor:Outer membrane protein TolC, Macrolide export protein MacA, Macrolide export ATP-binding/permease protein MacB
Authors:Fitzpatrick, A.W.P., Llabres, S., Neuberger, A., Blaza, J.N., Bai, X.-C., Okada, U., Murakami, S., van Veen, H.W., Zachariae, U., Scheres, S.H.W., Luisi, B.F., Du, D.
Deposit date:2017-03-24
Release date:2017-05-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of the MacAB-TolC ABC-type tripartite multidrug efflux pump.
Nat Microbiol, 2, 2017
5NIL
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STRUCTURE OF THE MACAB-TOLC ABC-TYPE TRIPARTITE MULTIDRUG EFFLUX PUMP-MACB SECTION
Descriptor:Outer membrane protein TolC, Macrolide export protein MacA, Macrolide export ATP-binding/permease protein MacB
Authors:Fitzpatrick, A.W.P., Llabres, S., Neuberger, A., Blaza, J.N., Bai, X.-C., Okada, U., Murakami, S., van Veen, H.W., Zachariae, U., Scheres, S.H.W., Luisi, B.F., Du, D.
Deposit date:2017-03-24
Release date:2017-05-24
Method:ELECTRON MICROSCOPY (5.3 Å)
Cite:Structure of the MacAB-TolC ABC-type tripartite multidrug efflux pump.
Nat Microbiol, 2, 2017
2HI7
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CRYSTAL STRUCTURE OF DSBA-DSBB-UBIQUINONE COMPLEX
Descriptor:Thiol:disulfide interchange protein dsbA, Disulfide bond formation protein B, ZINC ION, ...
Authors:Inaba, K., Murakami, S., Suzuki, M., Nakagawa, A., Yamashita, E., Okada, K., Ito, K.
Deposit date:2006-06-29
Release date:2006-12-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Crystal Structure of the DsbB-DsbA Complex Reveals a Mechanism of Disulfide Bond Generation
Cell(Cambridge,Mass.), 127, 2006
2ZUP
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UPDATED CRYSTAL STRUCTURE OF DSBB-DSBA COMPLEX FROM E. COLI
Descriptor:Thiol:disulfide interchange protein dsbA, Disulfide bond formation protein B, ZINC ION, ...
Authors:Inaba, K., Suzuki, M., Murakami, S., Nakagawa, A.
Deposit date:2008-10-28
Release date:2009-04-14
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Dynamic nature of disulphide bond formation catalysts revealed by crystal structures of DsbB
Embo J., 28, 2009
2ZUQ
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CRYSTAL STRUCTURE OF DSBB-FAB COMPLEX
Descriptor:Disulfide bond formation protein B, Fab fragment light chain, Fab fragment heavy chain, ...
Authors:Inaba, K., Suzuki, M., Murakami, S.
Deposit date:2008-10-28
Release date:2009-04-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Dynamic nature of disulphide bond formation catalysts revealed by crystal structures of DsbB
Embo J., 28, 2009
4K7Q
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CRYSTAL STRUCTURE OF ACRB COMPLEXED WITH LINEZOLID AT 3.5 RESOLUTION
Descriptor:Acriflavine resistance protein B, N-{[(5S)-3-(3-fluoro-4-morpholin-4-ylphenyl)-2-oxo-1,3-oxazolidin-5-yl]methyl}acetamide
Authors:Hung, L.W., Kim, H.B., Murakami, S., Gupta, G., Kim, C.Y., Terwilliger, T.C.
Deposit date:2013-04-17
Release date:2013-07-03
Last modified:2015-07-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structure of AcrB complexed with linezolid at 3.5 Angstrom resolution.
J.Struct.Funct.Genom., 14, 2013
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