Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5YHN
DownloadVisualize
BU of 5yhn by Molmil
Solution structure of the LEKTI Domain 4
Descriptor: cDNA FLJ60407, highly similar to Serine protease inhibitor Kazal-type 5
Authors:Mok, Y.K, Ramesh, K.
Deposit date:2017-09-29
Release date:2018-08-08
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Homologous Lympho-Epithelial Kazal-type Inhibitor Domains Delay Blood Coagulation by Inhibiting Factor X and XI with Differential Specificity.
Structure, 26, 2018
2A0A
DownloadVisualize
BU of 2a0a by Molmil
Solution Structure of Der f 13, Group 13 Allergen from House Dust Mites
Descriptor: Der f 13
Authors:Chan, S.L, Mok, Y.K.
Deposit date:2005-06-16
Release date:2006-04-11
Last modified:2019-11-06
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance structure-based epitope mapping and modulation of dust mite group 13 allergen as a hypoallergen.
J Immunol., 176, 2006
3PH0
DownloadVisualize
BU of 3ph0 by Molmil
Crystal structure of the heteromolecular chaperone, AscE-AscG, from the type III secretion system in Aeromonas hydrophila
Descriptor: AscE, AscG
Authors:Chatterjee, C, Kumar, S, Chakraborty, S, Tan, Y.W, Leung, K.Y, Sivaraman, J, Mok, Y.K.
Deposit date:2010-11-03
Release date:2011-07-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the heteromolecular chaperone, AscE-AscG, from the type III secretion system in Aeromonas hydrophila
Plos One, 6, 2011
4N7C
DownloadVisualize
BU of 4n7c by Molmil
Structural re-examination of native Bla g 4
Descriptor: 4-(2-aminoethyl)phenol, Bla g 4 allergen variant 1, CITRIC ACID, ...
Authors:Offermann, L.R, Chan, S.L, Osinski, T, Tan, Y.W, Chew, F.T, Sivaraman, J, Mok, Y.K, Minor, W, Chruszcz, M.
Deposit date:2013-10-15
Release date:2014-05-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The major cockroach allergen Bla g 4 binds tyramine and octopamine.
Mol.Immunol., 60, 2014
4N7D
DownloadVisualize
BU of 4n7d by Molmil
Selenomethionine incorporated Bla g 4
Descriptor: Bla g 4 allergen variant 1, CITRIC ACID, GLYCEROL
Authors:Offermann, L.R, Chan, S.L, Osinski, T, Tan, Y.W, Chew, F.T, Sivaraman, J, Mok, Y.K, Minor, W, Chruszcz, M.
Deposit date:2013-10-15
Release date:2014-05-21
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The major cockroach allergen Bla g 4 binds tyramine and octopamine.
Mol.Immunol., 60, 2014
2LM9
DownloadVisualize
BU of 2lm9 by Molmil
The NMR structure of a major allergen from dust mite
Descriptor: Blo t 21 allergen
Authors:Tan, K.W, Mok, Y.K.
Deposit date:2011-11-29
Release date:2012-08-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR structure and IgE epitopes of Blo t 21, a major dust mite allergen from Blomia tropicalis
J.Biol.Chem., 2012
3UV1
DownloadVisualize
BU of 3uv1 by Molmil
Crystal structure a major allergen from dust mite
Descriptor: Der f 7 allergen
Authors:Tan, K.W, Kumar, T, Chew, F.T, Mok, Y.K.
Deposit date:2011-11-29
Release date:2012-10-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Der f 7, a Dust Mite Allergen from Dermatophagoides farinae.
Plos One, 7, 2012
1Q5F
DownloadVisualize
BU of 1q5f by Molmil
NMR Structure of Type IVb pilin (PilS) from Salmonella typhi
Descriptor: PilS
Authors:Xu, X.F, Tan, Y.W, Hackett, J, Zhang, M, Mok, Y.K.
Deposit date:2003-08-07
Release date:2004-07-27
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:NMR Structure of a Type IVb Pilin from Salmonella typhi and Its Assembly into Pilus
J.Biol.Chem., 279, 2004
7E4V
DownloadVisualize
BU of 7e4v by Molmil
Crystal structure of mosquito Staufen dsRNA binding domain 4
Descriptor: GLYCEROL, Staufen
Authors:Gayathiri, S.K, Jobichen, C, Mok, Y.K.
Deposit date:2021-02-15
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal structure of mosquito Staufen dsRNA binding domain 4
To Be Published
7E50
DownloadVisualize
BU of 7e50 by Molmil
Crystal structure of human microplasmin in complex with kazal-type inhibitor AaTI
Descriptor: AAEL006007-PA, GLYCEROL, Plasminogen, ...
Authors:Varsha, A.W, Jobichen, C, Mok, Y.K.
Deposit date:2021-02-16
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of Aedes aegypti trypsin inhibitor in complex with mu-plasmin reveals role for scaffold stability in Kazal-type serine protease inhibitor.
Protein Sci., 31, 2022
7E4U
DownloadVisualize
BU of 7e4u by Molmil
Crystal structure of Peroxiredoxin-1
Descriptor: CALCIUM ION, GLYCEROL, Peroxiredoxin 1
Authors:Ahmed, S, Mok, Y.K, Jobichen, C.
Deposit date:2021-02-15
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Peroxiredoxin-1
To Be Published
2NDK
DownloadVisualize
BU of 2ndk by Molmil
20 lowest energy ensemble of dermcidin (DCD1L) NMR structure
Descriptor: Dermcidin
Authors:Tan, K.W, Mok, Y.K.
Deposit date:2016-06-29
Release date:2017-07-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for the bacterial membrane insertion of dermcidin peptide, DCD-1L.
Sci Rep, 7, 2017
2Q1K
DownloadVisualize
BU of 2q1k by Molmil
Cyrstal Structure of AscE from Aeromonas hydrophilla
Descriptor: AscE
Authors:Tan, Y.W, Yu, H.B, Leung, K.Y, Sivaraman, J, Mok, Y.K.
Deposit date:2007-05-24
Release date:2008-06-03
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of AscE and induced burial regions in AscE and AscG upon formation of the chaperone needle-subunit complex of type III secretion system in Aeromonas hydrophila.
Protein Sci., 17, 2008
3EBK
DownloadVisualize
BU of 3ebk by Molmil
Crystal structure of major allergens, Bla g 4 from cockroaches
Descriptor: Allergen Bla g 4
Authors:Tan, Y.W, Chan, S.L, Chew, F.T, Sivaraman, J, Mok, Y.K.
Deposit date:2008-08-28
Release date:2008-12-02
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of two major allergens, Bla g 4 and Per a 4, from cockroaches and their IgE binding epitopes.
J.Biol.Chem., 284, 2008
3EBW
DownloadVisualize
BU of 3ebw by Molmil
Crystal structure of major allergens, Per a 4 from cockroaches
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Per a 4 allergen
Authors:Tan, Y.W, Chan, S.L, Chew, F.T, Sivaraman, J, Mok, Y.K.
Deposit date:2008-08-28
Release date:2008-12-02
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of two major allergens, Bla g 4 and Per a 4, from cockroaches and their IgE binding epitopes.
J.Biol.Chem., 284, 2008
5ZPV
DownloadVisualize
BU of 5zpv by Molmil
Solution Structure of Thioredoxin-Like Effector Protein (TRX3) from Edwardsiella piscicida
Descriptor: Thioredoxin (H-type,TRX-H)
Authors:Sayed, A.M, Mok, Y.K.
Deposit date:2018-04-16
Release date:2019-05-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Trxlp, a thioredoxin-like effector from Edwardsiella piscicida inhibits cellular redox signaling and nuclear translocation of NF-kappa B.
Int.J.Biol.Macromol., 148, 2020
4KT5
DownloadVisualize
BU of 4kt5 by Molmil
Structure of GrlR-GrlA complex
Descriptor: GrlA, GrlR, TETRAETHYLENE GLYCOL
Authors:Padavannil, A, Jobichen, C, Sivaraman, J.
Deposit date:2013-05-20
Release date:2013-10-09
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of GrlR-GrlA complex that prevents GrlA activation of virulence genes
Nat Commun, 4, 2013
2JRK
DownloadVisualize
BU of 2jrk by Molmil
NMR Structure and Epitope Mapping of Blo t 5
Descriptor: Mite allergen Blo t 5
Authors:Chan, S, Mok, Y.
Deposit date:2007-06-27
Release date:2008-07-01
Last modified:2020-02-19
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance structure and IgE epitopes of Blo t 5, a major dust mite allergen
J.Immunol., 181, 2008
7EQZ
DownloadVisualize
BU of 7eqz by Molmil
Crystal structure of Carboxypeptidase B complexed with Potato Carboxypeptidase Inhibitor
Descriptor: Carboxypeptidase B, GLYCINE, Metallocarboxypeptidase inhibitor, ...
Authors:Choong, Y.K, Gavor, E, Jobichen, C, Sivaraman, J.
Deposit date:2021-05-05
Release date:2021-11-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of Aedes aegypti carboxypeptidase B1-inhibitor complex uncover the disparity between mosquito and non-mosquito insect carboxypeptidase inhibition mechanism.
Protein Sci., 30, 2021
7EQX
DownloadVisualize
BU of 7eqx by Molmil
Crystal structure of an Aedes aegypti procarboxypeptidase B1
Descriptor: Carboxypeptidase B, ZINC ION
Authors:Choong, Y.K, Gavor, E, Jobichen, C, Sivaraman, J.
Deposit date:2021-05-05
Release date:2021-11-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structure of Aedes aegypti procarboxypeptidase B1 and its binding with Dengue virus for controlling infection.
Life Sci Alliance, 5, 2022
3WXX
DownloadVisualize
BU of 3wxx by Molmil
Crystal Structure of a T3SS complex from Aeromonas hydrophila
Descriptor: AcrH, AopB, MAGNESIUM ION
Authors:Nguyen, V.S, Jobichen, C, Sivaraman, J, Henry, Y.K.M.
Deposit date:2014-08-12
Release date:2015-10-14
Last modified:2015-11-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of AcrH-AopB Chaperone-Translocator Complex Reveals a Role for Membrane Hairpins in Type III Secretion System Translocon Assembly
Structure, 23, 2015
2OVS
DownloadVisualize
BU of 2ovs by Molmil
Crystal structure of a Type Three secretion System protein
Descriptor: L0044, TETRAETHYLENE GLYCOL
Authors:Jobichen, C, Li, M, Sivaraman, J.
Deposit date:2007-02-15
Release date:2007-05-29
Last modified:2020-09-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of GrlR and the implication of its EDED motif in mediating the regulation of type III secretion system in EHEC.
Plos Pathog., 3, 2007
6KOR
DownloadVisualize
BU of 6kor by Molmil
Crystal structure of the RRM domain of SYNCRIP
Descriptor: Heterogeneous nuclear ribonucleoprotein Q
Authors:Chen, Y, Chan, J, Chen, W, Jobichen, C.
Deposit date:2019-08-12
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:SYNCRIP, a new player in pri-let-7a processing.
Rna, 26, 2020
3E3C
DownloadVisualize
BU of 3e3c by Molmil
Structure of GrlR-lipid complex
Descriptor: (2R)-2-HYDROXY-3-(PHOSPHONOOXY)PROPYL HEXANOATE, L0044
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2008-08-07
Release date:2009-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Identification and characterization of the lipid binding property of GrlR, a locus of enterocyte effacement regulator.
Biochem.J., 2009
3EAA
DownloadVisualize
BU of 3eaa by Molmil
Structure of a type six secretion system protein
Descriptor: EvpC
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2008-08-25
Release date:2009-08-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.794 Å)
Cite:Structural basis for the secretion of EvpC: a key type VI secretion system protein from Edwardsiella tarda
Plos One, 5, 2010

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon