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1C89
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NMR STRUCTURE OF INTRAMOLECULAR DIMER ANTIFREEZE PROTEIN RD3, 40 SA STRUCTURES
Descriptor:ANTIFREEZE PROTEIN TYPE III
Authors:Miura, K., Tsuda, S.
Deposit date:2000-05-04
Release date:2001-02-28
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR analysis of type III antifreeze protein intramolecular dimer. Structural basis for enhanced activity.
J.Biol.Chem., 276, 2001
1C8A
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NMR STRUCTURE OF INTRAMOLECULAR DIMER ANTIFREEZE PROTEIN RD3, 40 SA STRUCTURES
Descriptor:PROTEIN (ANTIFREEZE PROTEIN TYPE III)
Authors:Miura, K., Tsuda, S.
Deposit date:2000-05-04
Release date:2001-02-28
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR analysis of type III antifreeze protein intramolecular dimer. Structural basis for enhanced activity.
J.Biol.Chem., 276, 2001
1IOX
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NMR STRUCTURE OF HUMAN BETACELLULIN-2
Descriptor:Betacellulin
Authors:Miura, K., Doura, H., Aizawa, T., Tada, H., Seno, M., Yamada, H., Kawano, K.
Deposit date:2001-04-18
Release date:2002-07-24
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of betacellulin, a new member of EGF-family ligands.
Biochem.Biophys.Res.Commun., 294, 2002
1IP0
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NMR STRUCTURE OF HUMAN BETACELLULIN-2
Descriptor:BETACELLULIN
Authors:Miura, K., Doura, H., Aizawa, T., Tada, H., Seno, M., Yamada, H., Kawano, K.
Deposit date:2001-04-19
Release date:2002-07-31
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of betacellulin, a new member of EGF-family ligands.
Biochem.Biophys.Res.Commun., 294, 2002
1IRR
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SOLUTION STRUCTURE OF PARALYTIC PEPTIDE OF THE SILKWORM, BOMBYX MORI
Descriptor:paralytic peptide
Authors:Miura, K., Kamimura, M., Aizawa, T., Kiuchi, M., Hayakawa, Y., Mizuguchi, M., Kawano, K.
Deposit date:2001-10-23
Release date:2003-02-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of paralytic peptide of silkworm, Bombyx mori
peptides, 23, 2002
1IY3
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SOLUTION STRUCTURE OF THE HUMAN LYSOZYME AT 4 DEGREE C
Descriptor:Lysozyme
Authors:Kumeta, H., Miura, A., Kobashigawa, Y., Miura, K., Oka, C., Nitta, K., Nemoto, N., Tsuda, S.
Deposit date:2002-07-15
Release date:2002-07-31
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Low-temperature-induced structural changes in human lysozyme elucidated by three-dimensional NMR spectroscopy
Biochemistry, 42, 2003
1IY4
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SOLUTION STRUCTURE OF THE HUMAN LYSOZYME AT 35 DEGREE C
Descriptor:Lysozyme
Authors:Kumeta, H., Miura, A., Kobashigawa, Y., Miura, K., Oka, C., Nitta, K., Nemoto, N., Tsuda, S.
Deposit date:2002-07-15
Release date:2002-07-31
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Low-temperature-induced structural changes in human lysozyme elucidated by three-dimensional NMR spectroscopy
Biochemistry, 42, 2003
1WMW
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CRYSTAL STRUCTURE OF GERANULGERANYL DIPHOSPHATE SYNTHASE FROM THERMUS THERMOPHILUS
Descriptor:geranylgeranyl diphosphate synthetase
Authors:Suto, K., Nishio, K., Nodake, Y., Hamada, K., Kawamoto, M., Nakagawa, N., Kuramitu, S., Miura, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-07-21
Release date:2005-07-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of geranulgeranyl diphosphate synthase from Thermus thermophilus
To be Published
1IPB
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CRYSTAL STRUCTURE OF EUKARYOTIC INITIATION FACTOR 4E COMPLEXED WITH 7-METHYL GPPPA
Descriptor:EUKARYOTIC TRANSLATION INITIATION FACTOR 4E, P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE
Authors:Tomoo, K., Shen, X., Okabe, K., Nozoe, Y., Fukuhara, S., Morino, S., Ishida, T., Taniguchi, T., Hasegawa, H., Terashima, A., Sasaki, M., Katsuya, Y., Kitamura, K., Miyoshi, H., Ishikawa, M., Miura, K.
Deposit date:2001-05-08
Release date:2002-05-08
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of 7-methylguanosine 5'-triphosphate (m(7)GTP)- and P(1)-7-methylguanosine-P(3)-adenosine-5',5'-triphosphate (m(7)GpppA)-bound human full-length eukaryotic initiation factor 4E: biological importance of the C-terminal flexible region
BIOCHEM.J., 362, 2002
1IPC
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CRYSTAL STRUCTURE OF EUKARYOTIC INITIATION FACTOR 4E COMPLEXED WITH 7-METHYL GTP
Descriptor:EUKARYOTIC TRANSLATION INITIATION FACTOR 4E, 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE
Authors:Tomoo, K., Shen, X., Okabe, K., Nozoe, Y., Fukuhara, S., Morino, S., Ishida, T., Taniguchi, T., Hasegawa, H., Terashima, A., Sasaki, M., Katsuya, Y., Kitamura, K., Miyoshi, H., Ishikawa, M., Miura, K.
Deposit date:2001-05-08
Release date:2002-05-08
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of 7-methylguanosine 5'-triphosphate (m(7)GTP)- and P(1)-7-methylguanosine-P(3)-adenosine-5',5'-triphosphate (m(7)GpppA)-bound human full-length eukaryotic initiation factor 4E: biological importance of the C-terminal flexible region
BIOCHEM.J., 362, 2002
1K36
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NMR STRUCTURE OF HUMAN EPIREGULIN
Descriptor:Epiregulin
Authors:Sato, K., Miura, K., Tada, M., Aizawa, T., Miyamoto, K., Kawano, K.
Deposit date:2001-10-02
Release date:2003-09-30
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of epiregulin and the effect of its C-terminal domain for receptor binding affinity
Febs Lett., 553, 2003
1K37
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NMR STRUCTURE OF HUMAN EPIREGULIN
Descriptor:Epiregulin
Authors:Sato, K., Miura, K., Tada, M., Aizawa, T., Miyamoto, K., Kawano, K.
Deposit date:2001-10-02
Release date:2003-09-30
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of epiregulin and the effect of its C-terminal domain for receptor binding affinity
Febs Lett., 553, 2003
1DQC
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SOLUTION STRUCTURE OF TACHYCITIN, AN ANTIMICROBIAL PROTEIN WITH CHITIN-BINDING FUNCTION
Descriptor:TACHYCITIN
Authors:Suetake, T., Tsuda, S., Kawabata, S., Miura, K., Kawano, K.
Deposit date:2000-01-04
Release date:2000-09-13
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Chitin-binding proteins in invertebrates and plants comprise a common chitin-binding structural motif.
J.Biol.Chem., 275, 2000
1WKW
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CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF EIF4E-M7GPPPA-4EBP1 PEPTIDE
Descriptor:Eukaryotic translation initiation factor 4E, Eukaryotic translation initiation factor 4E binding protein 1, P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE
Authors:Tomoo, K., Matsushita, Y., Fujisaki, H., Shen, X., Miyagawa, H., Kitamura, K., Miura, K., Ishida, T.
Deposit date:2004-06-10
Release date:2005-06-10
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for mRNA Cap-Binding regulation of eukaryotic initiation factor 4E by 4E-binding protein, studied by spectroscopic, X-ray crystal structural, and molecular dynamics simulation methods
Biochim.Biophys.Acta, 1753, 2005
1IXJ
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CRYSTAL STRUCTURE OF D(GCGAAAGCT) CONTAINING PARALLEL-STRANDED DUPLEX WITH HOMO BASE PAIRS AND ANTI-PARALLEL DUPLEX WITH WATSON-CRICK BASE PAIRS
Descriptor:5'-D(*GP*CP*GP*AP*AP*AP*GP*CP*T)-3', MAGNESIUM ION, COBALT HEXAMMINE(III)
Authors:Sunami, T., Kondo, J., Kobuna, T., Hirao, I., Watanabe, K., Miura, K., Takenaka, A.
Deposit date:2002-06-22
Release date:2002-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of d(GCGAAAGCT) Containing a Parallel-stranded Duplex with Homo Base Pairs and an Anti-Parallel Duplex with Watson-Crick Base pairs
Nucleic Acids Res., 30, 2002
1KLV
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SOLUTION STRUCTURE AND BACKBONE DYNAMICS OF GABARAP, GABAA RECEPTOR ASSOCIATED PROTEIN
Descriptor:GABA(A) Receptor associated protein
Authors:Kouno, T., Miura, K., Tada, M., Kanematsu, T., Tate, S., Shirakawa, M., Hirata, M., Kawano, K.
Deposit date:2001-12-13
Release date:2003-10-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:1H, 13C and '5N resonance assignments of GABARAP, GABAA receptor associated protein.
J.Biomol.Nmr, 22, 2002
1KM7
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SOLUTION STRUCTURE AND BACKBONE DYNAMICS OF GABARAP, GABAA RECEPTOR ASSOCIATED PROTEIN
Descriptor:GABA(A) Receptor Associated Protein
Authors:Kouno, T., Miura, K., Tada, M., Kanematsu, T., Tate, S., Shirakawa, M., Hirata, M., Kawano, K.
Deposit date:2001-12-14
Release date:2003-10-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:1H, 13C and '5N resonance assignments of GABARAP, GABAA receptor associated protein.
J.Biomol.Nmr, 22, 2002
1UB8
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CRYSTAL STRUCTURE OF D(GCGAAGC), BENDING DUPLEX WITH A BULGE-IN RESIDUE
Descriptor:5'-D(*GP*CP*GP*AP*AP*GP*C)-3', COBALT HEXAMMINE(III)
Authors:Sunami, T., Kondo, J., Hirao, I., Watanabe, K., Miura, K., Takenaka, A.
Deposit date:2003-03-31
Release date:2004-03-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of d(GCGAAGC) and d(GCGAAAGC) (tetragonal form): a switching of partners of the sheared G.A pairs to form a functional G.AxA.G crossing.
Acta Crystallogr.,Sect.D, 60, 2004
1UE4
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CRYSTAL STRUCTURE OF D(GCGAAAGC)
Descriptor:5'-D(*GP*CP*GP*AP*AP*AP*GP*C)-3', MAGNESIUM ION
Authors:Sunami, T., Kondo, J., Hirao, I., Watanabe, K., Miura, K., Takenaka, A.
Deposit date:2003-05-09
Release date:2004-03-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structures of d(GCGAAGC) and d(GCGAAAGC) (tetragonal form): a switching of partners of the sheared G.A pairs to form a functional G.AxA.G crossing.
Acta Crystallogr.,Sect.D, 60, 2004
2D56
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SOLUTION STRUCTURE OF ASABF, ANTIBACTERIAL PEPTIDE ISOLATED FROM A NEMATODE, ASCARIS SUUM
Descriptor:ASABF
Authors:Nakano, M., Aizawa, T., Kamiya, M., Miura, K., Kumaki, Y., Demura, M., Tsuda, S., Kawano, K.
Deposit date:2005-10-28
Release date:2006-11-14
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure and function of ASABFd18c, antibacterial peptide isolated from a nematode, asucaris suum
To be Published
1IY5
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SOLUTION STRUCTURE OF WILD TYPE OMSVP3
Descriptor:OMSVP3
Authors:Hemmi, H., Kumazaki, T., Yamazaki, T., Kojima, S., Yoshida, T., Kyogoku, Y., Katsu, M., Yokosawa, H., Miura, K., Kobayashi, Y.
Deposit date:2002-07-23
Release date:2003-03-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Inhibitory Specificity Change of Ovomucoid Third Domain of the Silver Pheasant upon Introduction of an Engineered Cys14-Cys39 Bond
BIOCHEMISTRY, 42, 2003
1IY6
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SOLUTION STRUCTURE OF OMSVP3 VARIANT, P14C/N39C
Descriptor:OMSVP3
Authors:Hemmi, H., Kumazaki, T., Yamazaki, T., Kojima, S., Yoshida, T., Kyogoku, Y., Katsu, M., Yokosawa, H., Miura, K., Kobayashi, Y.
Deposit date:2002-07-23
Release date:2003-03-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Inhibitory Specificity Change of Ovomucoid Third Domain of the Silver Pheasant upon Introduction of an Engineered Cys14-Cys39 Bond
BIOCHEMISTRY, 42, 2003
1V5I
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CRYSTAL STRUCTURE OF SERINE PROTEASE INHIBITOR POIA1 IN COMPLEX WITH SUBTILISIN BPN'
Descriptor:Subtilisin BPN', IA-1=serine proteinase inhibitor, SULFATE ION, ...
Authors:Lee, W.C., Kikkawa, M., Kojima, S., Miura, K., Tanokura, M.
Deposit date:2003-11-24
Release date:2005-03-08
Last modified:2014-11-12
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of serine protease inhibitor POIA1 in complex with subtilisin BPN'
To be Published
3NLA
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NMR STRUCTURE OF THE N-TERMINAL DOMAIN WITH A LINKER PORTION OF ANTARCTIC EEL POUT ANTIFREEZE PROTEIN RD3, 40 STRUCTURES
Descriptor:ANTIFREEZE PROTEIN RD3 TYPE III
Authors:Miura, K., Ohgiya, S., Hoshino, T., Nemoto, N., Hikichi, K., Tsuda, S.
Deposit date:1998-02-24
Release date:1999-02-23
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural basis for the binding of a globular antifreeze protein to ice.
Nature, 384, 1996
3RDN
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NMR STRUCTURE OF THE N-TERMINAL DOMAIN WITH A LINKER PORTION OF ANTARCTIC EEL POUT ANTIFREEZE PROTEIN RD3, MINIMIZED AVERAGE STRUCTURE
Descriptor:ANTIFREEZE PROTEIN RD3 TYPE III
Authors:Miura, K., Ohgiya, S., Hoshino, T., Nemoto, N., Hikichi, K., Tsuda, S.
Deposit date:1998-02-24
Release date:1999-02-23
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural basis for the binding of a globular antifreeze protein to ice.
Nature, 384, 1996
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