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1DYP
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BU of 1dyp by Molmil
1,3-ALPHA-1,4-BETA-D-GALACTOSE-4-SULFATE-3,6-ANHYDRO-D-GALACTOSE 4 GALACTOHYDROLASE
Descriptor: CADMIUM ION, CHLORIDE ION, KAPPA-CARRAGEENASE
Authors:Michel, G, Chantalat, L, Dideberg, O.
Deposit date:2000-02-04
Release date:2001-01-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:The Kappa-Carrageenase of P. Carrageenovora Features a Tunnel-Shaped Active Site: A Novel Insight in the Evolution of Clan-B Glycoside Hydrolases
Structure, 9, 2001
1H80
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BU of 1h80 by Molmil
1,3-ALPHA-1,4-BETA-D-GALACTOSE-4-SULFATE- 3,6-ANHYDRO-D-GALACTOSE-2-SULFATE 4 GALACTOHYDROLASE
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Michel, G, Chantalat, L, Dideberg, O.
Deposit date:2001-01-22
Release date:2001-11-27
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Iota-Carrageenase of Alteromonas Fortis. A Beta-Helix Fold-Containing Enzyme for the Degradation of a Highly Polyanionic Polysaccharide
J.Biol.Chem., 276, 2001
1KTW
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BU of 1ktw by Molmil
IOTA-CARRAGEENASE COMPLEXED TO IOTA-CARRAGEENAN FRAGMENTS
Descriptor: 3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose, 3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose-(1-4)-3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose, CALCIUM ION, ...
Authors:Michel, G, Kahn, R, Dideberg, O.
Deposit date:2002-01-18
Release date:2003-06-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Structural Bases of the Processive Degradation of iota-Carrageenan, a Main Cell Wall Polysaccharide of Red Algae.
J.Mol.Biol., 334, 2003
1GZ0
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BU of 1gz0 by Molmil
23S RIBOSOMAL RNA G2251 2'O-METHYLTRANSFERASE RLMB
Descriptor: HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH
Authors:Michel, G, Cygler, M.
Deposit date:2002-05-03
Release date:2002-10-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Structure of the Rlmb 23S Rrna Methyltransferase Reveals a New Methyltransferase Fold with a Unique Knot
Structure, 10, 2002
1O9B
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BU of 1o9b by Molmil
QUINATE/SHIKIMATE DEHYDROGENASE YDIB COMPLEXED WITH NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, HYPOTHETICAL SHIKIMATE 5-DEHYDROGENASE-LIKE PROTEIN YDIB, PHOSPHATE ION
Authors:Michel, G, Cygler, M.
Deposit date:2002-12-12
Release date:2003-02-01
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of Shikimate Dehydrogenase Aroe and its Paralog Ydib: A Common Structural Framework for Different Activities
J.Biol.Chem., 278, 2003
1OFM
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BU of 1ofm by Molmil
CRYSTAL STRUCTURE OF CHONDROITINASE B COMPLEXED TO CHONDROITIN 4-SULFATE TETRASACCHARIDE
Descriptor: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose, CHONDROITINASE B, alpha-D-galactopyranose-(1-3)-[beta-D-glucopyranose-(1-4)]2-O-methyl-alpha-L-fucopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-glucopyranuronic acid-(1-2)-[alpha-L-rhamnopyranose-(1-4)]alpha-D-mannopyranose
Authors:Michel, G, Cygler, M.
Deposit date:2003-04-15
Release date:2004-04-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Structure of Chondroitin B Lyase Complexed with Glycosaminoglycan Oligosaccharides Unravels a Calcium-Dependent Catalytic Machinery
J.Biol.Chem., 279, 2004
1OFL
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BU of 1ofl by Molmil
CRYSTAL STRUCTURE OF CHONDROITINASE B COMPLEXED TO DERMATAN SULFATE HEXASACCHARIDE
Descriptor: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-alpha-D-galactopyranose, 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose, CALCIUM ION, ...
Authors:Michel, G, Cygler, M.
Deposit date:2003-04-15
Release date:2004-06-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structure of Chondroitin B Lyase Complexed with Glycosaminoglycan Oligosaccharides Unravels a Calcium-Dependent Catalytic Machinery
J.Biol.Chem., 279, 2004
5OLC
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BU of 5olc by Molmil
Crystal structure of the 3,6-anhydro-D-galactonate cycloisomerase from Zobellia galactanivorans
Descriptor: Galactonate dehydratase, MAGNESIUM ION
Authors:Michel, G, Czjzek, M, Jam, M.
Deposit date:2017-07-27
Release date:2017-12-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria.
Nat Commun, 8, 2017
4USZ
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BU of 4usz by Molmil
Crystal structure of the first bacterial vanadium dependant iodoperoxidase
Descriptor: SODIUM ION, VANADATE ION, VANADIUM-DEPENDENT HALOPEROXIDASE
Authors:Rebuffet, E, Delage, L, Fournier, J.B, Rzonca, J, Potin, P, Michel, G, Czjzek, M, Leblanc, C.
Deposit date:2014-07-17
Release date:2014-10-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Bacterial Vanadium Iodoperoxidase from the Marine Flavobacteriaceae Zobellia Galactanivorans Reveals Novel Molecular and Evolutionary Features of Halide Specificity in This Enzyme Family.
Appl.Environ.Microbiol., 80, 2014
4ATF
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BU of 4atf by Molmil
Crystal structure of inactivated mutant beta-agarase B in complex with agaro-octaose
Descriptor: 3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose, BETA-AGARASE B, SODIUM ION
Authors:Bernard, T, Hehemann, J.H, Correc, G, Jam, M, Michel, G, Czjzek, M.
Deposit date:2012-05-06
Release date:2012-07-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biochemical and Structural Characterization of the Complex Agarolytic Enzyme System from the Marine Bacterium Zobellia Galactanivorans.
J.Biol.Chem., 287, 2012
4ATE
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BU of 4ate by Molmil
High resolution crystal structure of beta-porphyranase A from Zobellia galactanivorans
Descriptor: BETA-PORPHYRANASE A, CALCIUM ION, CHLORIDE ION, ...
Authors:Hehemann, J.H, Correc, G, Jam, M, Michel, G, Czjzek, M.
Deposit date:2012-05-06
Release date:2012-07-25
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Biochemical and Structural Characterization of the Complex Agarolytic Enzyme System from the Marine Bacterium Zobellia Galactanivorans.
J.Biol.Chem., 287, 2012
3ILF
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BU of 3ilf by Molmil
Crystal structure of porphyranase A (PorA) in complex with neo-porphyrotetraose
Descriptor: 6-O-sulfo-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-6-O-sulfo-alpha-L-galactopyranose-(1-3)-alpha-D-galactopyranose, ACETATE ION, CALCIUM ION, ...
Authors:Hehemann, J.H, Correc, G, Barbeyron, T, Helbert, W, Michel, G, Czjzek, M.
Deposit date:2009-08-07
Release date:2010-04-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota.
Nature, 464, 2010
3JUU
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BU of 3juu by Molmil
Crystal structure of porphyranase B (PorB) from Zobellia galactanivorans
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, SULFATE ION, ...
Authors:Hehemann, J.H, Correc, G, Barbeyron, T, Michel, G, Czjzek, M.
Deposit date:2009-09-15
Release date:2010-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota.
Nature, 464, 2010
2VH9
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BU of 2vh9 by Molmil
CRYSTAL STRUCTURE OF NXG1-DELTAYNIIG IN COMPLEX WITH XLLG, A XYLOGLUCAN DERIVED OLIGOSACCHARIDE
Descriptor: CELLULASE, GLYCEROL, ZINC ION, ...
Authors:Czjzek, M, Mark, P, Baumann, M.J, Eklof, J.M, Michel, G, Brumer, H.
Deposit date:2007-11-20
Release date:2008-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Analysis of Nasturtium Tmnxg1 Complexes by Crystallography and Molecular Dynamics Provides Detailed Insight Into Substrate Recognition by Family Gh16 Xyloglucan Endo-Transglycosylases and Endo-Hydrolases.
Proteins, 75, 2009
5FUI
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BU of 5fui by Molmil
Crystal structure of the C-terminal CBM6 of LamC a marine laminarianse from Zobellia galactanivorans
Descriptor: 2-AMINOMETHYL-PYRIDINE, ENDO-1,3-BETA-GLUCANASE, FAMILY GH16, ...
Authors:Labourel, A, Jam, M, Legentil, L, Sylla, B, Hehemann, J.H, Ficko-Blean, E, Ferrieres, V, Czjzek, M, Michel, G.
Deposit date:2016-01-27
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Unraveling the Multivalent Binding of a Marine Family 6 Carbohydrate-Binding Module with its Native Laminarin Ligand.
FEBS J., 283, 2016
4ASM
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BU of 4asm by Molmil
Crystal structure of the catalytic domain of beta-agarase D from Zobellia galactanivorans
Descriptor: BETA-AGARASE D, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Hehemann, J.H, Correc, G, Bernard, T, Michel, G, Czjzek, M.
Deposit date:2012-05-02
Release date:2012-07-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Biochemical and Structural Characterization of the Complex Agarolytic Enzyme System from the Marine Bacterium Zobellia Galactanivorans.
J.Biol.Chem., 287, 2012
3LMW
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BU of 3lmw by Molmil
Crystal structure of iota-carrageenase family GH82 from A. fortis in absence of chloride ions
Descriptor: CALCIUM ION, Iota-carrageenase, CgiA, ...
Authors:Rebuffet, E, Barbeyron, T, Jeudy, A, Czjzek, M, Michel, G.
Deposit date:2010-02-01
Release date:2010-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of catalytic residues and mechanistic analysis of family GH82 iota-carrageenases
Biochemistry, 49, 2010
3P2N
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BU of 3p2n by Molmil
Discovery and structural characterization of a new glycoside hydrolase family abundant in coastal waters that was annotated as 'hypothetical protein'
Descriptor: 3,6-anhydro-alpha-L-galactosidase, CHLORIDE ION, ZINC ION
Authors:Rebuffet, E, Barbeyron, T, Czjzek, M, Michel, G.
Deposit date:2010-10-03
Release date:2011-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Discovery and structural characterization of a novel glycosidase family of marine origin.
Environ Microbiol, 13, 2011
5OPQ
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BU of 5opq by Molmil
A 3,6-anhydro-D-galactosidase produced by Zobellia galactanivorans. This is an exo-lytic enzyme that hydrolyzes terminal 3,6-anhydro-D-galactose from the non-reducing end of carrageenan oligosaccharides.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6-anhydro-D-galactosidase, ...
Authors:Ficko-Blean, E, Michel, G, Czjzek, M.
Deposit date:2017-08-10
Release date:2017-11-29
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria.
Nat Commun, 8, 2017
2UWC
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BU of 2uwc by Molmil
Crystal structure of Nasturtium xyloglucan hydrolase isoform NXG2
Descriptor: CELLULASE
Authors:Baumann, M.J, Eklof, J.M, Michel, G, Kallas, A, Teeri, T.T, Brumer, H, Czjzek, M.
Deposit date:2007-03-20
Release date:2007-06-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Evidence for the Evolution of Xyloglucanase Activity from Xyloglucan Endo-Transglycosylases: Biological Implications for Cell Wall Metabolism.
Plant Cell, 19, 2007
2UWA
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BU of 2uwa by Molmil
Crystal structure of the Nasturtium seedling xyloglucanase isoform NXG1
Descriptor: CELLULASE, GLYCEROL
Authors:Baumann, M.J, Eklof, J, Michel, G, Kallasa, A, Teeri, T.T, Brumer, H, Czjzek, M.
Deposit date:2007-03-19
Release date:2007-06-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Evidence for the Evolution of Xyloglucanase Activity from Xyloglucan Endo-Transglycosylases: Biological Implications for Cell Wall Metabolism.
Plant Cell, 19, 2007
2UWB
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BU of 2uwb by Molmil
Crystal structure of the Nasturtium seedling mutant xyloglucanase isoform NXG1-delta-YNIIG
Descriptor: CELLULASE
Authors:Baumann, M.J, Eklof, J, Michel, G, Kallasa, A, Teeri, T.T, Brumer, H, Czjzek, M.
Deposit date:2007-03-20
Release date:2007-06-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Evidence for the Evolution of Xyloglucanase Activity from Xyloglucan Endo-Transglycosylases: Biological Implications for Cell Wall Metabolism.
Plant Cell, 19, 2007
3ZPY
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BU of 3zpy by Molmil
Crystal structure of the marine PL7 alginate lyase AlyA1 from Zobellia galactanivorans
Descriptor: ALGINATE LYASE, FAMILY PL7, SODIUM ION
Authors:Thomas, F, Jeudy, A, Michel, G, Czjzek, M.
Deposit date:2013-03-04
Release date:2013-06-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Comparative Characterization of Two Marine Alginate Lyases from Zobellia Galactanivorans Reveals Distinct Modes of Action and Exquisite Adaptation to Their Natural Substrate.
J.Biol.Chem., 288, 2013
4A15
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BU of 4a15 by Molmil
Crystal structure of an XPD DNA complex
Descriptor: 5'-D(*DTP*AP*CP*GP)-3', ATP-DEPENDENT DNA HELICASE TA0057, CALCIUM ION, ...
Authors:Kuper, J, Wolski, S.C, Michels, G, Kisker, C.
Deposit date:2011-09-14
Release date:2012-02-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Functional and Structural Studies of the Nucleotide Excision Repair Helicase Xpd Suggest a Polarity for DNA Translocation.
Embo J., 31, 2011
4BE3
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BU of 4be3 by Molmil
crystal structure of the exolytic PL7 alginate lyase AlyA5 from Zobellia galactanivorans
Descriptor: ALGINATE LYASE, FAMILY PL7, D(-)-TARTARIC ACID, ...
Authors:Thomas, F, Jeudy, A, Michel, G, Czjzek, M.
Deposit date:2013-03-05
Release date:2013-06-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Comparative Characterization of Two Marine Alginate Lyases from Zobellia Galactanivorans Reveals Distinct Modes of Action and Exquisite Adaptation to Their Natural Substrate.
J.Biol.Chem., 288, 2013

 

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