Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1MXD
DownloadVisualize
BU of 1mxd by Molmil
Structure of a (Ca,Zn)-dependent alpha-amylase from the hyperthermophilic archaeon Pyrococcus woesei
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
Authors:Linden, A, Mayans, O, Meyer-Klaucke, W, Antranikian, G, Wilmanns, M.
Deposit date:2002-10-02
Release date:2003-06-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Differential Regulation of a Hyperthermophilic alpha-Amylase with a Novel (Ca,Zn) Two-metal Center by Zinc
J.Biol.Chem., 278, 2003
1MXG
DownloadVisualize
BU of 1mxg by Molmil
Crystal Structure of a (Ca,Zn)-dependent alpha-amylase from the hyperthermophilic archaeon Pyrococcus woesei in complex with acarbose
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Linden, A, Mayans, O, Meyer-Klaucke, W, Antranikian, G, Wilmanns, M.
Deposit date:2002-10-02
Release date:2003-06-10
Last modified:2020-09-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Differential Regulation of a Hyperthermophilic alpha-Amylase with a Novel (Ca,Zn) Two-metal Center by Zinc
J.Biol.Chem., 278, 2003
2L62
DownloadVisualize
BU of 2l62 by Molmil
Protein and metal cluster structure of the wheat metallothionein domain g-Ec-1. The second part of the puzzle.
Descriptor: EC protein I/II, ZINC ION
Authors:Loebus, J, Peroza, E.A, Bluethgen, N, Fox, T, Meyer-Klaucke, W, Zerbe, O, Freisinger, E.
Deposit date:2010-11-12
Release date:2011-05-25
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Protein and metal cluster structure of the wheat metallothionein domain gamma-E(c)-1: the second part of the puzzle.
J.Biol.Inorg.Chem., 16, 2011
1MWO
DownloadVisualize
BU of 1mwo by Molmil
Crystal Structure Analysis of the Hyperthermostable Pyrocoocus woesei alpha-amylase
Descriptor: CALCIUM ION, ZINC ION, alpha amylase
Authors:Linden, A, Mayans, O, Meyer-Klaucke, W, Antranikian, G, Wilmanns, M.
Deposit date:2002-09-30
Release date:2003-06-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Differential Regulation of a Hyperthermophilic alpha-Amylase with a Novel (Ca,Zn) Two-metal Center by Zinc
J.Biol.Chem., 278, 2003
2L61
DownloadVisualize
BU of 2l61 by Molmil
Protein and metal cluster structure of the wheat metallothionein domain g-Ec-1. The second part of the puzzle.
Descriptor: CADMIUM ION, EC protein I/II
Authors:Loebus, J, Peroza, E.A, Bluethgen, N, Fox, T, Meyer-Klaucke, W, Zerbe, O, Freisinger, E.
Deposit date:2010-11-12
Release date:2011-05-25
Last modified:2013-06-19
Method:SOLUTION NMR
Cite:Protein and metal cluster structure of the wheat metallothionein domain gamma-E(c)-1: the second part of the puzzle.
J.Biol.Inorg.Chem., 16, 2011
2CBN
DownloadVisualize
BU of 2cbn by Molmil
Crystal structure of ZipD from Escherichia coli
Descriptor: RIBONUCLEASE Z, ZINC ION
Authors:Pohl, E, Meyer-Klaucke, W, Kostelecky, B.
Deposit date:2006-01-06
Release date:2006-02-15
Last modified:2014-02-05
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Crystal Structure of the Zinc Phosphodiesterase from Escherichia Coli Provides Insight Into Function and Cooperativity of Trnase Z-Family Proteins.
J.Bacteriol., 188, 2006
1RU3
DownloadVisualize
BU of 1ru3 by Molmil
Crystal Structure of the monomeric acetyl-CoA synthase from Carboxydothermus hydrogenoformans
Descriptor: Acetyl-CoA synthase, GLYCEROL, IRON/SULFUR CLUSTER, ...
Authors:Svetlitchnyi, V, Dobbek, H, Meyer-Klaucke, W, Meins, T, Thiele, B, Rmer, P, Huber, R, Meyer, O.
Deposit date:2003-12-11
Release date:2003-12-23
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A functional Ni-Ni-[4Fe-4S] cluster in the monomeric acetyl-CoA synthase from Carboxydothermus hydrogenoformans
Proc.Natl.Acad.Sci.USA, 101, 2004
2O03
DownloadVisualize
BU of 2o03 by Molmil
Crystal structure of FurB from M. tuberculosis- a Zinc uptake regulator
Descriptor: ZINC ION, probable Zinc uptake regulation protein FurB
Authors:Lucarelli, D, Russo, S, Pohl, E.
Deposit date:2006-11-27
Release date:2007-02-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.699 Å)
Cite:Crystal structure and function of the zinc uptake regulator FurB from Mycobacterium tuberculosis.
J.Biol.Chem., 282, 2007
3F47
DownloadVisualize
BU of 3f47 by Molmil
The Crystal Structure of [Fe]-Hydrogenase (Hmd) Holoenzyme from Methanocaldococcus jannaschii
Descriptor: 5'-O-[(S)-hydroxy{[2-hydroxy-3,5-dimethyl-6-(2-oxoethyl)pyridin-4-yl]oxy}phosphoryl]guanosine, 5,10-methenyltetrahydromethanopterin hydrogenase, CARBON MONOXIDE, ...
Authors:Hiromoto, T, Pilak, O, Warkentin, E, Thauer, R.K, Shima, S, Ermler, U.
Deposit date:2008-10-31
Release date:2009-02-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The crystal structure of C176A mutated [Fe]-hydrogenase suggests an acyl-iron ligation in the active site iron complex.
Febs Lett., 583, 2009
1OIH
DownloadVisualize
BU of 1oih by Molmil
Crystal structure of the alkylsulfatase AtsK, a non-heme Fe(II) alphaketoglutarate dependent Dioxygenase
Descriptor: PUTATIVE ALKYLSULFATASE ATSK, SODIUM ION
Authors:Mueller, I, Kahnert, A, Pape, T, Dierks, T, Meyer-Klauke, W, Kertesz, M, Uson, I.
Deposit date:2003-06-18
Release date:2004-03-30
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal Structure of the Alkylsulfatase Atsk: Insights Into the Catalytic Mechanism of the Fe(II) -Ketoglutarate-Dependent Dioxygenase Superfamily
Biochemistry, 42, 2004
1OII
DownloadVisualize
BU of 1oii by Molmil
Crystal structure of the alkylsulfatase AtsK, a non-heme Fe(II) alphaketoglutarate dependent Dioxygenase in complex with iron and alphaketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, FE (II) ION, PUTATIVE ALKYLSULFATASE ATSK
Authors:Mueller, I, Kahnert, A, Pape, T, Dierks, T, Meyer-Klauke, W, Kertesz, M.A, Uson, I.
Deposit date:2003-06-18
Release date:2004-03-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Crystal Structure of the Alkylsulfatase Atsk: Insights Into the Catalytic Mechanism of the Fe(II) Alpha-Ketoglutarate-Dependent Dioxygenase Superfamily
Biochemistry, 42, 2004
1OIK
DownloadVisualize
BU of 1oik by Molmil
Crystal structure of the alkylsulfatase AtsK, a non-heme Fe(II) alphaketoglutarate dependent Dioxygenase in complex with fe, alphaketoglutarate and 2-ethyl-1-hexanesulfuric acid
Descriptor: (2R)-2-ETHYL-1-HEXANESULFONIC ACID, 2-OXOGLUTARIC ACID, FE (II) ION, ...
Authors:Mueller, I, Kahnert, A, Pape, T, Dierks, T, Meyer-Klauke, W, Kertesz, M.A, Uson, I.
Deposit date:2003-06-18
Release date:2004-03-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Crystal Structure of the Alkylsulfatase Atsk: Insights Into the Catalytic Mechanism of the Fe(II) Alpha-Ketoglutarate-Dependent Dioxygenase Superfamily
Biochemistry, 42, 2004
1OIJ
DownloadVisualize
BU of 1oij by Molmil
Crystal structure of the alkylsulfatase AtsK, a non-heme Fe(II) alphaketoglutarate dependent Dioxygenase in complex with alphaketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, PUTATIVE ALKYLSULFATASE ATSK, SODIUM ION
Authors:Mueller, I, Kahnert, A, Pape, T, Dierks, T, Meyer-Klauke, W, Kertesz, M.A, Uson, I.
Deposit date:2003-06-18
Release date:2004-03-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the Alkylsulfatase Atsk: Insights Into the Catalytic Mechanism of the Fe(II) Alpha-Ketoglutarate-Dependent Dioxygenase Superfamily
Biochemistry, 42, 2004
4JJF
DownloadVisualize
BU of 4jjf by Molmil
Crystal structure of FE-hydrogenase from methanothermobacter marburgensis in complex with 2-naphthylisocyanide
Descriptor: 5,10-methenyltetrahydromethanopterin hydrogenase, N-(naphthalen-2-yl)methanimine, iron-guanylyl pyridinol cofactor
Authors:Tamura, H, Warkentin, E, Ermler, U, Shima, S.
Deposit date:2013-03-07
Release date:2013-08-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of [fe]-hydrogenase in complex with inhibitory isocyanides: implications for the h2 -activation site.
Angew.Chem.Int.Ed.Engl., 52, 2013
4JJG
DownloadVisualize
BU of 4jjg by Molmil
Crystal structure of FE-hydrogenase from methanothermobacter marburgensis in complex with toluenesulfonylmethylisocyanide
Descriptor: 5,10-methenyltetrahydromethanopterin hydrogenase, N-methyl-1-[(4-methylbenzyl)sulfonyl]methanamine, iron-guanylyl pyridinol cofactor
Authors:Tamura, H, Warkentin, E, Ermler, U, Shima, S.
Deposit date:2013-03-07
Release date:2013-08-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of [fe]-hydrogenase in complex with inhibitory isocyanides: implications for the h2 -activation site.
Angew.Chem.Int.Ed.Engl., 52, 2013
2IAH
DownloadVisualize
BU of 2iah by Molmil
Crystal structure of the ferripyoverdine receptor of the outer membrane of Pseudomonas aeruginosa bound to ferripyoverdine.
Descriptor: (1S)-1-CARBOXY-5-[(3-CARBOXYPROPANOYL)AMINO]-8,9-DIHYDROXY-1,2,3,4-TETRAHYDROPYRIMIDO[1,2-A]QUINOLIN-11-IUM, FE (III) ION, Ferripyoverdine receptor, ...
Authors:Wirth, C, Pattus, F, Cobessi, D.
Deposit date:2006-09-08
Release date:2007-09-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:From the periplasmic signaling domain to the extracellular face of an outer membrane signal transducer of Pseudomonas aeruginosa: crystal structure of the ferric pyoverdine outer membrane receptor.
J.Mol.Biol., 368, 2007
2K8D
DownloadVisualize
BU of 2k8d by Molmil
Solution structure of a zinc-binding methionine sulfoxide reductase
Descriptor: Peptide methionine sulfoxide reductase msrB, ZINC ION
Authors:Carella, M, Ohlenschlager, O, Gorlach, M.
Deposit date:2008-09-05
Release date:2008-12-16
Last modified:2015-10-28
Method:SOLUTION NMR
Cite:Structure-function relationship in an archaebacterial methionine sulphoxide reductase B.
Mol.Microbiol., 79, 2011
1MZB
DownloadVisualize
BU of 1mzb by Molmil
Ferric uptake regulator
Descriptor: ZINC ION, ferric uptake regulation protein
Authors:Pohl, E, Vasil, M.L, Haller, J.C.
Deposit date:2002-10-07
Release date:2003-10-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Architecture of a protein central to iron homeostatis: Crystal structure and spectroscopic analysis of the Ferric uptake regulator
Mol.Microbiol., 47, 2003
2BW1
DownloadVisualize
BU of 2bw1 by Molmil
Iron-bound crystal structure of Dps-like peroxide resistance protein (Dpr) from Streptococcus suis.
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, DPS-LIKE PEROXIDE RESISTANCE PROTEIN, ...
Authors:Kauko, A, Pulliainen, A, Haataja, S, Finne, J, Papageorgiou, A.C.
Deposit date:2005-07-07
Release date:2006-09-27
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Iron incorporation in Streptococcus suis Dps-like peroxide resistance protein Dpr requires mobility in the ferroxidase center and leads to the formation of a ferrihydrite-like core.
J. Mol. Biol., 364, 2006
2CF7
DownloadVisualize
BU of 2cf7 by Molmil
Asp74Ala mutant crystal structure for Dps-like peroxide resistance protein Dpr from Streptococcus suis.
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Kauko, A, Pulliainen, A.T, Haataja, S, Finne, J, Papageorgiou, A.C.
Deposit date:2006-02-16
Release date:2006-09-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Iron incorporation in Streptococcus suis Dps-like peroxide resistance protein Dpr requires mobility in the ferroxidase center and leads to the formation of a ferrihydrite-like core.
J. Mol. Biol., 364, 2006
2F8B
DownloadVisualize
BU of 2f8b by Molmil
NMR structure of the C-terminal domain (dimer) of HPV45 oncoprotein E7
Descriptor: Protein E7, ZINC ION
Authors:Ohlenschlager, O, Gorlach, M.
Deposit date:2005-12-02
Release date:2006-08-08
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of the partially folded high-risk human papilloma virus 45 oncoprotein E7.
Oncogene, 25, 2006
2EWL
DownloadVisualize
BU of 2ewl by Molmil
Solution structure of the C-terminal domain (monomer) of the HPV45 oncoprotein E7
Descriptor: Protein E7, ZINC ION
Authors:Ohlenschlager, O, Gorlach, M.
Deposit date:2005-11-04
Release date:2006-10-17
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the partially folded high-risk human papilloma virus 45 oncoprotein E7.
Oncogene, 25, 2006
3CFZ
DownloadVisualize
BU of 3cfz by Molmil
Crystal structure of M. jannaschii periplasmic binding protein ModA/WtpA with bound tungstate
Descriptor: TUNGSTATE(VI)ION, UPF0100 protein MJ1186
Authors:Comellas-Bigler, M, Hollenstein, K, Locher, K.P.
Deposit date:2008-03-04
Release date:2009-03-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Distorted octahedral coordination of tungstate in a subfamily of specific binding proteins.
J.Biol.Inorg.Chem., 14, 2009
3CG1
DownloadVisualize
BU of 3cg1 by Molmil
Crystal structure of P. furiosus periplasmic binding protein ModA/WtpA with bound tungstate
Descriptor: TUNGSTATE(VI)ION, UPF0100 protein PF0080
Authors:Comellas-Bigler, M, Hollenstein, K, Locher, K.P.
Deposit date:2008-03-04
Release date:2009-03-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Distorted octahedral coordination of tungstate in a subfamily of specific binding proteins.
J.Biol.Inorg.Chem., 14, 2009
3CG3
DownloadVisualize
BU of 3cg3 by Molmil
Crystal structure of P. horikoshii periplasmic binding protein ModA/WtpA with bound tungstate
Descriptor: TUNGSTATE(VI)ION, UPF0100 protein PH0151
Authors:Comellas-Bigler, M, Hollenstein, K, Locher, K.P.
Deposit date:2008-03-04
Release date:2009-03-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Distorted octahedral coordination of tungstate in a subfamily of specific binding proteins.
J.Biol.Inorg.Chem., 14, 2009

 

12>

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon