Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5CGZ
DownloadVisualize
BU of 5cgz by Molmil
Crystal structure of GalB, the 4-carboxy-2-hydroxymuconate hydratase, from Pseuodomonas putida KT2440
Descriptor: 4-oxalmesaconate hydratase, GLYCEROL, ZINC ION
Authors:Mazurkewich, S, Brott, A.S, Kimber, M.S, Seah, S.Y.K.
Deposit date:2015-07-09
Release date:2016-02-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Structural and Kinetic Characterization of the 4-Carboxy-2-hydroxymuconate Hydratase from the Gallate and Protocatechuate 4,5-Cleavage Pathways of Pseudomonas putida KT2440.
J.Biol.Chem., 291, 2016
6XYZ
DownloadVisualize
BU of 6xyz by Molmil
Crystal structure of the GH18 chitinase ChiB from the chitin utilization locus of Flavobacterium johnsoniae
Descriptor: 1,2-ETHANEDIOL, Candidate chitinase Glycoside hydrolase family 18, FORMIC ACID
Authors:Mazurkewich, S, Helland, R, MacKenzie, A, Eijsink, V, Pope, P, Branden, G, Larsbrink, J.
Deposit date:2020-01-31
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural insights of the enzymes from the chitin utilization locus of Flavobacterium johnsoniae.
Sci Rep, 10, 2020
6YHH
DownloadVisualize
BU of 6yhh by Molmil
X-ray Structure of Flavobacterium johnsoniae chitobiase (FjGH20)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-N-acetylglucosaminidase-like protein Glycoside hydrolase family 20, GLYCEROL
Authors:Mazurkewich, S, Helland, R, MacKenzie, A, Eijsink, V.G.H, Pope, P.B, Branden, G, Larsbrink, J.
Deposit date:2020-03-30
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights of the enzymes from the chitin utilization locus of Flavobacterium johnsoniae.
Sci Rep, 10, 2020
7NTL
DownloadVisualize
BU of 7ntl by Molmil
AA9 lytic polysaccharide monooxygenase (LPMO) from Malbranchea cinnamomea
Descriptor: CITRIC ACID, COPPER (II) ION, LPMO9F
Authors:Mazurkewich, S, Seveso, A, Huttner, S, Branden, G, Larsbrink, L.
Deposit date:2021-03-10
Release date:2021-08-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Structure of a C1/C4-oxidizing AA9 lytic polysaccharide monooxygenase from the thermophilic fungus Malbranchea cinnamomea.
Acta Crystallogr D Struct Biol, 77, 2021
7ZOP
DownloadVisualize
BU of 7zop by Molmil
Carbohydrate binding domain CBMXX from a multi-catalytic glucanase-chitinase from Chitinophaga pinensis DSM 2588 in complex with sophorose.
Descriptor: Carbohydrate binding domain XX, beta-D-glucopyranose
Authors:Mazurkewich, S, McKee, L.S, Lu, Z, Branden, G, Larsbrink, J.
Deposit date:2022-04-26
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:CBMXX: A new family of Carbohydrate Binding Modules displaying three distinct ligand binding sites with affinity for beta-glucans.
To Be Published
7ZOH
DownloadVisualize
BU of 7zoh by Molmil
Carbohydrate binding domain CBMXX from a multi-catalytic glucanase-chitinase from Chitinophaga pinensis DSM 2588
Descriptor: Carbohydrate binding domain XX
Authors:Mazurkewich, S, McKee, L.S, Lu, Z, Branden, G, Larsbrink, J.
Deposit date:2022-04-25
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:CBMXX: A new family of Carbohydrate Binding Modules displaying three distinct ligand binding sites with affinity for beta-glucans.
To Be Published
7ZON
DownloadVisualize
BU of 7zon by Molmil
Carbohydrate binding domain CBMXX from a multi-catalytic glucanase-chitinase from Chitinophaga pinensis DSM 2588 in complex with glucose
Descriptor: Carbohydrate binding domain XX, PENTAETHYLENE GLYCOL, beta-D-glucopyranose
Authors:Mazurkewich, S, McKee, L.S, Lu, Z, Branden, G, Larsbrink, J.
Deposit date:2022-04-26
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:CBMXX: A new family of Carbohydrate Binding Modules displaying three distinct ligand binding sites with affinity for beta-glucans.
To Be Published
7ZOO
DownloadVisualize
BU of 7zoo by Molmil
Carbohydrate binding domain CBMXX from a multi-catalytic glucanase-chitinase from Chitinophaga pinensis DSM 2588 in complex with gentiobiose
Descriptor: Carbohydrate binding domain XX, beta-D-glucopyranose
Authors:Mazurkewich, S, McKee, L.S, Lu, Z, Branden, G, Larsbrink, J.
Deposit date:2022-04-26
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:CBMXX: A new family of Carbohydrate Binding Modules displaying three distinct ligand binding sites with affinity for beta-glucans.
To Be Published
7ZOI
DownloadVisualize
BU of 7zoi by Molmil
Carbohydrate binding domain CBMXX from a multi-catalytic glucanase-chitinase from Chitinophaga pinensis DSM 2588
Descriptor: Carbohydrate binding domain XX
Authors:Mazurkewich, S, McKee, L.S, Lu, Z, Branden, G, Larsbrink, J.
Deposit date:2022-04-25
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:CBMXX: A new family of Carbohydrate Binding Modules displaying three distinct ligand binding sites with affinity for beta-glucans.
To Be Published
6SZ4
DownloadVisualize
BU of 6sz4 by Molmil
The glucuronoyl esterase OtCE15A H408A variant from Opitutus terrae in complex with, and covalently linked to, D-glucuronate
Descriptor: FORMIC ACID, beta-D-glucopyranuronic acid, glucuronoyl esterase OtCE15A
Authors:Mazurkewich, S, Navarro Poulsen, J.C, Larsbrink, J, Lo Leggio, L.
Deposit date:2019-10-01
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and biochemical studies of the glucuronoyl esteraseOtCE15A illuminate its interaction with lignocellulosic components.
J.Biol.Chem., 294, 2019
6SZO
DownloadVisualize
BU of 6szo by Molmil
The glucuronoyl esterase OtCE15A S267A variant from Opitutus terrae in complex with D-galacturonate
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:Mazurkewich, S, Navarro Poulsen, J.C, Larsbrink, J, Lo Leggio, L.
Deposit date:2019-10-02
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and biochemical studies of the glucuronoyl esteraseOtCE15A illuminate its interaction with lignocellulosic components.
J.Biol.Chem., 294, 2019
6SYR
DownloadVisualize
BU of 6syr by Molmil
The wild type glucuronoyl esterase OtCE15A from Opitutus terrae in complex with D-glucuronate
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, SODIUM ION, ...
Authors:Mazurkewich, S, Navarro Poulsen, J.C, Larsbrink, J, Lo Leggio, L.
Deposit date:2019-10-01
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structural and biochemical studies of the glucuronoyl esteraseOtCE15A illuminate its interaction with lignocellulosic components.
J.Biol.Chem., 294, 2019
6SZ0
DownloadVisualize
BU of 6sz0 by Molmil
The glucuronoyl esterase OtCE15A H408A variant from Opitutus terrae
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Mazurkewich, S, Navarro Poulsen, J.C, Larsbrink, J, Lo Leggio, L.
Deposit date:2019-10-01
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural and biochemical studies of the glucuronoyl esteraseOtCE15A illuminate its interaction with lignocellulosic components.
J.Biol.Chem., 294, 2019
6T0E
DownloadVisualize
BU of 6t0e by Molmil
The glucuronoyl esterase OtCE15A S267A variant from Opitutus terrae in complex with benzyl D-glucuronoate and D-glucuronate
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Mazurkewich, S, Navarro Poulsen, J.C, Larsbrink, J, Lo Leggio, L.
Deposit date:2019-10-03
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural and biochemical studies of the glucuronoyl esteraseOtCE15A illuminate its interaction with lignocellulosic components.
J.Biol.Chem., 294, 2019
6SYU
DownloadVisualize
BU of 6syu by Molmil
The wild type glucuronoyl esterase OtCE15A from Opitutus terrae in complex with xylobiose
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, TETRAETHYLENE GLYCOL, ...
Authors:Mazurkewich, S, Navarro Poulsen, J.C, Larsbrink, J, Lo Leggio, L.
Deposit date:2019-10-01
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Structural and biochemical studies of the glucuronoyl esteraseOtCE15A illuminate its interaction with lignocellulosic components.
J.Biol.Chem., 294, 2019
6T0I
DownloadVisualize
BU of 6t0i by Molmil
The wild type glucuronoyl esterase OtCE15A from Opitutus terrae in complex with the aldotetrauronic acid XUX
Descriptor: 1,2-ETHANEDIOL, 4-O-methyl-alpha-D-glucopyranuronic acid-(1-2)-[beta-D-xylopyranose-(1-4)]beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Mazurkewich, S, Navarro Poulsen, J.C, Larsbrink, J, Lo Leggio, L.
Deposit date:2019-10-03
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structural and biochemical studies of the glucuronoyl esteraseOtCE15A illuminate its interaction with lignocellulosic components.
J.Biol.Chem., 294, 2019
6SYV
DownloadVisualize
BU of 6syv by Molmil
The glucuronoyl esterase OtCE15A S267A variant from Opitutus terrae in complex with D-glucuronate
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
Authors:Mazurkewich, S, Navarro Poulsen, J.C, Larsbrink, J, Lo Leggio, L.
Deposit date:2019-10-01
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Structural and biochemical studies of the glucuronoyl esteraseOtCE15A illuminate its interaction with lignocellulosic components.
J.Biol.Chem., 294, 2019
8B48
DownloadVisualize
BU of 8b48 by Molmil
Structure of Lentithecium fluviatile carbohydrate esterase from the CE15 family (LfCE15C)
Descriptor: Carbohydrate esterase family 15 protein, FORMIC ACID, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Scholzen, K, Mazurkewich, S, Poulsen, J.C.N, Larsbrink, J, Lo Leggio, L.
Deposit date:2022-09-20
Release date:2023-06-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural and functional investigation of a fungal member of carbohydrate esterase family 15 with potential specificity for rare xylans.
Acta Crystallogr D Struct Biol, 79, 2023
6HSW
DownloadVisualize
BU of 6hsw by Molmil
A CE15 glucuronoyl esterase from Teredinibacter turnerae T7901
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, Carbohydrate esterase family 15 domain protein, ...
Authors:Mazurkewich, S, Lo Leggio, L, Navarro Poulsen, J.C, Larsbrink, J.
Deposit date:2018-10-02
Release date:2019-03-20
Last modified:2019-05-29
Method:X-RAY DIFFRACTION (2.14734387 Å)
Cite:Structure-function analyses reveal that a glucuronoyl esterase fromTeredinibacter turneraeinteracts with carbohydrates and aromatic compounds.
J.Biol.Chem., 294, 2019
8Q6S
DownloadVisualize
BU of 8q6s by Molmil
A carbohydrate esterase family 15 (CE15) glucuronoyl esterase from Phocaeicola vulgatus ATCC 8482
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, Putative acetyl xylan esterase, ...
Authors:Mazurkewich, S, Seveso, A, Banerjee, S, Lo Leggio, L, Larsbrink, J.
Deposit date:2023-08-14
Release date:2023-12-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Polysaccharide utilization loci from Bacteroidota encode CE15 enzymes with possible roles in cleaving pectin-lignin bonds.
Appl.Environ.Microbiol., 90, 2024
7B6B
DownloadVisualize
BU of 7b6b by Molmil
The carbohydrate binding module family 48 (CBM48) and carboxy-terminal carbohydrate esterase family 1 (CE1) domains of the multidomain esterase DmCE1B from Dysgonomonas mossii in complex with methyl ferulate
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Carbohydrate Esterase family 1 protein with an N-terminal carbohydrate binding module family 48, ...
Authors:Mazurkewich, S, Kmezik, C, Branden, G, Larsbrink, J.
Deposit date:2020-12-07
Release date:2021-03-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:A polysaccharide utilization locus from the gut bacterium Dysgonomonas mossii encodes functionally distinct carbohydrate esterases.
J.Biol.Chem., 296, 2021
7B5V
DownloadVisualize
BU of 7b5v by Molmil
The carbohydrate binding module family 48 (CBM48) and carboxy-terminal carbohydrate esterase family 1 (CE1) domains of the multidomain esterase DmCE1B from Dysgonomonas mossii
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Carbohydrate Esterase family 1 protein with an N-terminal carbohydrate binding module family 48, ...
Authors:Mazurkewich, S, Kmezik, C, Branden, G, Larsbrink, J.
Deposit date:2020-12-07
Release date:2021-03-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A polysaccharide utilization locus from the gut bacterium Dysgonomonas mossii encodes functionally distinct carbohydrate esterases.
J.Biol.Chem., 296, 2021
7B7H
DownloadVisualize
BU of 7b7h by Molmil
The glucuronoyl esterase OtCE15A R268A variant from Opitutus terrae in complex with, and covalently linked to, D-glucuronate
Descriptor: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, GLYCINE, ...
Authors:Mazurkewich, S, Larsbrink, J, Lo Leggio, L.
Deposit date:2020-12-10
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanism and biomass association of glucuronoyl esterase: an alpha / beta hydrolase with potential in biomass conversion.
Nat Commun, 13, 2022
7Q6Y
DownloadVisualize
BU of 7q6y by Molmil
The X-ray crystal structure of CbTan2, a tannase enzyme from Clostridium butyricum
Descriptor: 1,2-ETHANEDIOL, Alpha/beta hydrolase, DI(HYDROXYETHYL)ETHER
Authors:Coleman, T, Mazurkewich, S, Larsbrink, J.
Deposit date:2021-11-09
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural diversity and substrate preferences of three tannase enzymes encoded by the anaerobic bacterium Clostridium butyricum.
J.Biol.Chem., 298, 2022
3NOJ
DownloadVisualize
BU of 3noj by Molmil
The structure of HMG/CHA aldolase from the protocatechuate degradation pathway of Pseudomonas putida
Descriptor: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase, MAGNESIUM ION, PYRUVIC ACID, ...
Authors:Kimber, M.S, Wang, W, Mazurkewich, S, Seah, S.Y.K.
Deposit date:2010-06-25
Release date:2010-09-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structural and Kinetic Characterization of 4-Hydroxy-4-methyl-2-oxoglutarate/4-Carboxy-4-hydroxy-2-oxoadipate Aldolase, a Protocatechuate Degradation Enzyme Evolutionarily Convergent with the HpaI and DmpG Pyruvate Aldolases.
J.Biol.Chem., 285, 2010

 

12>

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon