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3I9T
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BU of 3i9t by Molmil
Crystal structure of the rat heme oxygenase (HO-1) in complex with heme binding dithiothreitol (DTT)
Descriptor: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Matsui, T, Unno, M, Ikeda-Saito, M.
Deposit date:2009-07-13
Release date:2010-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Dioxygen activation for the self-degradation of heme: reaction mechanism and regulation of heme oxygenase.
Inorg.Chem., 49, 2010
3I9U
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BU of 3i9u by Molmil
Crystal structure of the rat heme oxygenase (HO-1) in complex with heme binding dithioerythritol (DTE)
Descriptor: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Matsui, T, Unno, M, Ikeda-Saito, M.
Deposit date:2009-07-13
Release date:2010-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Dioxygen activation for the self-degradation of heme: reaction mechanism and regulation of heme oxygenase.
Inorg.Chem., 49, 2010
3I8R
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BU of 3i8r by Molmil
Crystal structure of the heme oxygenase from Corynebacterium diphtheriae (HmuO) in complex with heme binding ditiothreitol (DTT)
Descriptor: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, Heme oxygenase, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Matsui, T, Unno, M, Ikeda-Saito, M.
Deposit date:2009-07-10
Release date:2010-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Dioxygen activation for the self-degradation of heme: reaction mechanism and regulation of heme oxygenase.
Inorg.Chem., 49, 2010
2DI2
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BU of 2di2 by Molmil
NMR structure of the HIV-2 nucleocapsid protein
Descriptor: Nucleocapsid protein p7, ZINC ION
Authors:Matsui, T, Kodera, Y, Endoh, H, Miyauchi, E, Komatsu, H, Sato, K, Tanaka, T, Kohno, T, Maeda, T.
Deposit date:2006-03-27
Release date:2007-03-13
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:RNA Recognition Mechanism of the Minimal Active Domain of the Human Immunodeficiency Virus Type-2 Nucleocapsid Protein
J.Biochem.(Tokyo), 141, 2007
2E1X
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BU of 2e1x by Molmil
NMR structure of the HIV-2 nucleocapsid protein
Descriptor: Gag-Pol polyprotein (Pr160Gag-Pol), ZINC ION
Authors:Matsui, T, Kodera, Y, Miyauchi, E, Tanaka, H, Endoh, H, Komatsu, H, Tanaka, T, Kohno, T, Maeda, T.
Deposit date:2006-11-03
Release date:2007-06-05
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structural role of the secondary active domain of HIV-2 NCp8 in multi-functionality
Biochem.Biophys.Res.Commun., 358, 2007
2EC7
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BU of 2ec7 by Molmil
Solution Structure of Human Immunodificiency Virus Type-2 Nucleocapsid Protein
Descriptor: Gag polyprotein (Pr55Gag), ZINC ION
Authors:Matsui, T, Kodera, Y, Tanaka, T, Endoh, H, Tanaka, H, Miyauchi, E, Komatsu, H, Kohno, T, Maeda, T.
Deposit date:2007-02-10
Release date:2008-02-19
Last modified:2019-12-11
Method:SOLUTION NMR
Cite:The RNA recognition mechanism of human immunodeficiency virus (HIV) type 2 NCp8 is different from that of HIV-1 NCp7
Biochemistry, 48, 2009
1WNV
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BU of 1wnv by Molmil
D136A mutant of Heme Oxygenase from Corynebacterium diphtheriae (HmuO)
Descriptor: Heme oxygenase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Matsui, T, Unno, M, Ikeda-Saito, M.
Deposit date:2004-08-10
Release date:2004-11-09
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Roles of Distal Asp in Heme Oxygenase from Corynebacterium diphtheriae, HmuO: A WATER-DRIVEN OXYGEN ACTIVATION MECHANISM
J.Biol.Chem., 280, 2005
5WX6
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BU of 5wx6 by Molmil
Alkyldiketide-CoA synthase W332Q mutant from Evodia rutaecarpa
Descriptor: Alkyldiketide-CoA synthase, COENZYME A, SULFATE ION
Authors:Matsui, T, Kodama, T, Tadakoshi, T, Morita, H.
Deposit date:2017-01-06
Release date:2017-04-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:2-Alkylquinolone alkaloid biosynthesis in the medicinal plant Evodia rutaecarpa involves collaboration of two novel type III polyketide synthases
J. Biol. Chem., 292, 2017
5WX3
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BU of 5wx3 by Molmil
Alkyldiketide-CoA synthase from Evodia rutaecarpa
Descriptor: Alkyldiketide-CoA synthase, COENZYME A, SULFATE ION
Authors:Matsui, T, Kodama, T, Tadakoshi, T, Morita, H.
Deposit date:2017-01-06
Release date:2017-04-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:2-Alkylquinolone alkaloid biosynthesis in the medicinal plant Evodia rutaecarpa involves collaboration of two novel type III polyketide synthases
J. Biol. Chem., 292, 2017
5WX7
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BU of 5wx7 by Molmil
Alkyldiketide-CoA synthase W332G mutant from Evodia rutaecarpa
Descriptor: Alkyldiketide-CoA synthase, COENZYME A, SULFATE ION
Authors:Matsui, T, Kodama, T, Tadakoshi, T, Morita, H.
Deposit date:2017-01-06
Release date:2017-04-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.904 Å)
Cite:2-Alkylquinolone alkaloid biosynthesis in the medicinal plant Evodia rutaecarpa involves collaboration of two novel type III polyketide synthases
J. Biol. Chem., 292, 2017
5WX5
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BU of 5wx5 by Molmil
Alkylquinolone synthase Y215V mutant from Evodia rutaecarpa
Descriptor: Alkylquinolone synthase
Authors:Matsui, T, Kodama, T, Tadakoshi, T, Morita, H.
Deposit date:2017-01-06
Release date:2017-04-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.058 Å)
Cite:2-Alkylquinolone alkaloid biosynthesis in the medicinal plant Evodia rutaecarpa involves collaboration of two novel type III polyketide synthases
J. Biol. Chem., 292, 2017
5WX4
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BU of 5wx4 by Molmil
Alkylquinolone synthase from Evodia rutaecarpa
Descriptor: alkylquinolone synthase
Authors:Matsui, T, Kodama, T, Tadakoshi, T, Morita, H.
Deposit date:2017-01-06
Release date:2017-04-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.203 Å)
Cite:2-Alkylquinolone alkaloid biosynthesis in the medicinal plant Evodia rutaecarpa involves collaboration of two novel type III polyketide synthases
J. Biol. Chem., 292, 2017
6AL3
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BU of 6al3 by Molmil
Lys49 PLA2 BPII derived from the venom of Protobothrops flavoviridis.
Descriptor: Basic phospholipase A2 BP-II, SULFATE ION
Authors:Matsui, T, Kamata, S, Suzuki, A, Oda-Ueda, N, Ogawa, T, Tanaka, Y.
Deposit date:2018-09-05
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:SDS-induced oligomerization of Lys49-phospholipase A2from snake venom.
Sci Rep, 9, 2019
3VO9
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BU of 3vo9 by Molmil
Staphylococcus aureus FtsZ apo-form (SeMet)
Descriptor: Cell division protein FtsZ
Authors:Matsui, T, Yamane, J, Mogi, N, Yao, M, Tanaka, I.
Deposit date:2012-01-20
Release date:2012-08-29
Last modified:2013-08-14
Method:X-RAY DIFFRACTION (2.706 Å)
Cite:Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
3VPA
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BU of 3vpa by Molmil
Staphylococcus aureus FtsZ apo-form
Descriptor: Cell division protein FtsZ
Authors:Matsui, T, Yamane, J, Mogi, N, Yao, M, Tanaka, I.
Deposit date:2012-02-28
Release date:2012-08-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.487 Å)
Cite:Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
3VO8
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BU of 3vo8 by Molmil
Staphylococcus aureus FtsZ GDP-form
Descriptor: CALCIUM ION, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
Authors:Matsui, T, Mogi, N, Yao, M, Tanaka, I.
Deposit date:2012-01-20
Release date:2012-08-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.255 Å)
Cite:Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
3WGJ
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BU of 3wgj by Molmil
STAPHYLOCOCCUS AUREUS FTSZ T7 chimera mutant, T7Bs
Descriptor: CALCIUM ION, Cell division protein FtsZ
Authors:Matsui, T, Tanaka, I, Yao, M.
Deposit date:2013-08-06
Release date:2013-12-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.179 Å)
Cite:Structural change in FtsZ Induced by intermolecular interactions between bound GTP and the T7 loop
J.Biol.Chem., 289, 2014
3WGN
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BU of 3wgn by Molmil
STAPHYLOCOCCUS AUREUS FTSZ bound with GTP-gamma-S
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Cell division protein FtsZ
Authors:Matsui, T, Mogi, N, Tanaka, I, Yao, M.
Deposit date:2013-08-06
Release date:2013-12-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.606 Å)
Cite:Structural change in FtsZ Induced by intermolecular interactions between bound GTP and the T7 loop
J.Biol.Chem., 289, 2014
1VEC
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BU of 1vec by Molmil
Crystal structure of the N-terminal domain of rck/p54, a human DEAD-box protein
Descriptor: ATP-dependent RNA helicase p54, L(+)-TARTARIC ACID, ZINC ION
Authors:Hogetsu, K, Matsui, T, Yukihiro, Y, Tanaka, M, Sato, T, Kumasaka, T, Tanaka, N.
Deposit date:2004-03-29
Release date:2004-04-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural insight of human DEAD-box protein rck/p54 into its substrate recognition with conformational changes
Genes Cells, 11, 2006
1WNX
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BU of 1wnx by Molmil
D136E mutant of Heme Oxygenase from Corynebacterium diphtheriae (HmuO)
Descriptor: Heme oxygenase, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, ...
Authors:Unno, M, Matsui, T, Ikeda-Saito, M.
Deposit date:2004-08-10
Release date:2004-11-09
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Roles of Distal Asp in Heme Oxygenase from Corynebacterium diphtheriae, HmuO: A WATER-DRIVEN OXYGEN ACTIVATION MECHANISM
J.Biol.Chem., 280, 2005
1WNW
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BU of 1wnw by Molmil
D136N mutant of Heme Oxygenase from Corynebacterium diphtheriae (HmuO)
Descriptor: Heme oxygenase, IODIDE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Unno, M, Matsui, T, Ikeda-Saito, M.
Deposit date:2004-08-10
Release date:2004-11-09
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Roles of Distal Asp in Heme Oxygenase from Corynebacterium diphtheriae, HmuO: A WATER-DRIVEN OXYGEN ACTIVATION MECHANISM
J.Biol.Chem., 280, 2005
3WVR
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BU of 3wvr by Molmil
Structure of ATP grasp protein with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, GLYCEROL, PGM1, ...
Authors:Matsui, T, Noike, M, Ooya, K, Sasaki, I, Hamano, Y, Maruyama, C, Ishikawa, J, Satoh, Y, Ito, H, Dairi, T, Morita, H.
Deposit date:2014-06-04
Release date:2014-11-19
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.175 Å)
Cite:A peptide ligase and the ribosome cooperate to synthesize the peptide pheganomycin.
Nat.Chem.Biol., 11, 2015
3WVQ
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BU of 3wvq by Molmil
Structure of ATP grasp protein
Descriptor: GLYCEROL, PGM1, SULFATE ION
Authors:Matsui, T, Noike, M, Ooya, K, Sasaki, I, Hamano, Y, Maruyama, C, Ishikawa, J, Satoh, Y, Ito, H, Dairi, T, Morita, H.
Deposit date:2014-06-04
Release date:2014-11-19
Last modified:2014-12-31
Method:X-RAY DIFFRACTION (1.955 Å)
Cite:A peptide ligase and the ribosome cooperate to synthesize the peptide pheganomycin.
Nat.Chem.Biol., 11, 2015
3VOA
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BU of 3voa by Molmil
Staphylococcus aureus FtsZ 12-316 GDP-form
Descriptor: CALCIUM ION, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
Authors:Yamane, J, Matsui, T, Mogi, N, Yao, M, Tanaka, I.
Deposit date:2012-01-20
Release date:2012-08-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
3VOB
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BU of 3vob by Molmil
Staphylococcus aureus FtsZ with PC190723
Descriptor: 3-[(6-chloro[1,3]thiazolo[5,4-b]pyridin-2-yl)methoxy]-2,6-difluorobenzamide, CALCIUM ION, Cell division protein FtsZ, ...
Authors:Yamane, J, Matsui, T, Mogi, N, Yamaguchi, H, Takemoto, H, Yao, M, Tanaka, I.
Deposit date:2012-01-20
Release date:2012-08-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012

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