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Crystal structure of prokaryotic phospholipase A2 at atomic resolution
Descriptor:	putative secreted protein
Authors:	Matoba, Y, Sugiyama, M.
Deposit date:	2002-05-31
Release date:	2003-06-10
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.05 Å)
Cite:	Atomic resolution structure of prokaryotic phospholipase A2: Analysis of internal motion and implication for a catalytic mechanism. PROTEINS: STRUCT.,FUNCT.,GENET., 51, 2003

1FAZ

THE CRYSTAL STRUCTURE OF PROKARYOTIC PHOSPHOLIPASE A2
Descriptor:	PHOSPHOLIPASE A2
Authors:	Matoba, Y, katsube, Y, Sugiyama, M.
Deposit date:	2000-07-14
Release date:	2001-07-18
Last modified:	2017-10-04
Method:	X-RAY DIFFRACTION (1.4 Å)
Cite:	The crystal structure of prokaryotic phospholipase A2. J.Biol.Chem., 277, 2002

1KP4

CALCIUM-BOUND FORM OF PROKARYOTIC PHOSPHOLIPASE A2
Descriptor:	CALCIUM ION, phospholipase A2
Authors:	Matoba, Y, Katsube, Y, Sugiyama, M.
Deposit date:	2001-12-28
Release date:	2002-09-04
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	The crystal structure of prokaryotic phospholipase A2. J.Biol.Chem., 277, 2002

5B1H

Crystal structure of cystathionine beta-synthase from Lactobacillus plantarum
Descriptor:	Cystathionine beta-synthase, GLYCEROL, SULFATE ION
Authors:	Matoba, Y, Sugiyama, M.
Deposit date:	2015-12-04
Release date:	2016-12-07
Last modified:	2023-11-15
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Crystallographic and mutational analyses of cystathionine beta-synthase in the H2 S-synthetic gene cluster in Lactobacillus plantarum Protein Sci., 26, 2017

5B1I

Crystal structure of K42A mutant of cystathionine beta-synthase from Lactobacillus plantarum in a complex with L-methionine
Descriptor:	Cystathionine beta-synthase, N-[(3-HYDROXY-2-METHYL-5-{[(TRIHYDROXYPHOSPHORANYL)OXY]METHYL}PYRIDIN-4-YL)METHYLENE]METHIONINE, SULFATE ION
Authors:	Matoba, Y, Sugiyama, M.
Deposit date:	2015-12-04
Release date:	2016-12-07
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (3.3 Å)
Cite:	Crystallographic and mutational analyses of cystathionine beta-synthase in the H2 S-synthetic gene cluster in Lactobacillus plantarum Protein Sci., 26, 2017

2AHL

Crystal structure of the hydroxylamine-induced deoxy-form of the copper-bound Streptomyces castaneoglobisporus tyrosinase in complex with a caddie protein
Descriptor:	CADDIE PROTEIN ORF378, COPPER (I) ION, NITRATE ION, ...
Authors:	Matoba, Y, Kumagai, T, Yamamoto, A, Yoshitsu, H, Sugiyama, M.
Deposit date:	2005-07-28
Release date:	2006-01-31
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Crystallographic Evidence That the Dinuclear Copper Center of Tyrosinase Is Flexible during Catalysis J.Biol.Chem., 281, 2006

2AHK

Crystal structure of the met-form of the copper-bound Streptomyces castaneoglobisporus tyrosinase in complex with a caddie protein obtained by soking in cupric sulfate for 6 months
Descriptor:	CADDIE PROTEIN ORF378, COPPER (II) ION, NITRATE ION, ...
Authors:	Matoba, Y, Kumagai, T, Yamamoto, A, Yoshitsu, H, Sugiyama, M.
Deposit date:	2005-07-28
Release date:	2006-01-31
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.71 Å)
Cite:	Crystallographic Evidence That the Dinuclear Copper Center of Tyrosinase Is Flexible during Catalysis J.Biol.Chem., 281, 2006

1WX5

Crystal Structure of the copper-free Streptomyces castaneoglobisporus tyrosinase complexed with a caddie protein in the monoclinic crystal
Descriptor:	CHLORIDE ION, MelC, SODIUM ION, ...
Authors:	Matoba, Y, Kumagai, T, Yamamoto, A, Yoshitsu, H, Sugiyama, M.
Deposit date:	2005-01-19
Release date:	2006-01-31
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.02 Å)
Cite:	Crystallographic Evidence That the Dinuclear Copper Center of Tyrosinase Is Flexible during Catalysis J.Biol.Chem., 281, 2006

1WXC

Crystal Structure of the copper-free Streptomyces castaneoglobisporus tyrosinase complexed with a caddie protein
Descriptor:	MelC, NITRATE ION, tyrosinase
Authors:	Matoba, Y, Kumagai, T, Yamamoto, A, Yoshitsu, H, Sugiyama, M.
Deposit date:	2005-01-20
Release date:	2006-01-31
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (1.2 Å)
Cite:	Crystallographic Evidence That the Dinuclear Copper Center of Tyrosinase Is Flexible during Catalysis J.Biol.Chem., 281, 2006

1WX2

Crystal Structure of the oxy-form of the copper-bound Streptomyces castaneoglobisporus tyrosinase complexed with a caddie protein prepared by the addition of hydrogenperoxide
Descriptor:	COPPER (II) ION, MelC, NITRATE ION, ...
Authors:	Matoba, Y, Kumagai, T, Yamamoto, A, Yoshitsu, H, Sugiyama, M.
Deposit date:	2005-01-19
Release date:	2006-01-31
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Crystallographic Evidence That the Dinuclear Copper Center of Tyrosinase Is Flexible during Catalysis J.Biol.Chem., 281, 2006

1WX4

Crystal structure of the oxy-form of the copper-bound Streptomyces castaneoglobisporus tyrosinase complexed with a caddie protein prepared by the addition of dithiothreitol
Descriptor:	COPPER (II) ION, MelC, NITRATE ION, ...
Authors:	Matoba, Y, Kumagai, T, Yamamoto, A, Yoshitsu, H, Sugiyama, M.
Deposit date:	2005-01-19
Release date:	2006-01-31
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	Crystallographic Evidence That the Dinuclear Copper Center of Tyrosinase Is Flexible during Catalysis J.Biol.Chem., 281, 2006

5Z0E

Crystal structure of copper-bound tyrosinase from Streptomyces castaneoglobisporus in complex with the Y98F mutant of the caddie protein obtained by soaking in the hydroxylamine-containing solution for 2 h at 298 K
Descriptor:	COPPER (II) ION, MelC, NITRATE ION, ...
Authors:	Matoba, Y, Sugiyama, M.
Deposit date:	2017-12-19
Release date:	2018-12-26
Last modified:	2023-11-22
Method:	X-RAY DIFFRACTION (1.16 Å)
Cite:	Catalytic mechanism of tyrosinase implied from the quinone formation on the Tyr98 residue of the caddie protein To Be Published

5Z0F

Crystal structure of copper-bound tyrosinase from Streptomyces castaneoglobisporus in complex with the caddie protein obtained by soaking in the hydroxylamine-containing solution for 10 min at 298 K
Descriptor:	COPPER (II) ION, MelC, NITRATE ION, ...
Authors:	Matoba, Y, Sugiyama, M.
Deposit date:	2017-12-19
Release date:	2018-12-26
Last modified:	2023-11-22
Method:	X-RAY DIFFRACTION (1.16 Å)
Cite:	Catalytic mechanism of tyrosinase implied from the quinone formation on the Tyr98 residue of the caddie protein To Be Published

5Z0M

Crystal structure of copper-bound H63F-mutated tyrosinase from Streptomyces castaneoglobisporus in complex with the caddie protein obtained by soaking in the hydroxylamine-containing solution for 12 h at 298 K
Descriptor:	COPPER (II) ION, MelC, NITRATE ION, ...
Authors:	Matoba, Y, Sugiyama, M.
Deposit date:	2017-12-19
Release date:	2018-12-26
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Catalytic mechanism of tyrosinase implied from the quinone formation on the Tyr98 residue of the caddie protein To Be Published

5Z0L

Crystal structure of copper-bound tyrosinase from Streptomyces castaneoglobisporus in complex with the caddie protein obtained by soaking in the hydroxylamine-containing solution for 9 h at 277 K
Descriptor:	COPPER (II) ION, MelC, NITRATE ION, ...
Authors:	Matoba, Y, Sugiyama, M.
Deposit date:	2017-12-19
Release date:	2018-12-26
Last modified:	2023-11-22
Method:	X-RAY DIFFRACTION (1.17 Å)
Cite:	Catalytic mechanism of tyrosinase implied from the quinone formation on the Tyr98 residue of the caddie protein To Be Published

5Z0K

Crystal structure of copper-bound tyrosinase from Streptomyces castaneoglobisporus in complex with the caddie protein obtained by soaking in the hydroxylamine-containing solution for 4 h at 277 K
Descriptor:	COPPER (II) ION, MelC, NITRATE ION, ...
Authors:	Matoba, Y, Sugiyama, M.
Deposit date:	2017-12-19
Release date:	2018-12-26
Last modified:	2023-11-22
Method:	X-RAY DIFFRACTION (1.28 Å)
Cite:	Catalytic mechanism of tyrosinase implied from the quinone formation on the Tyr98 residue of the caddie protein To Be Published

5Z0D

1.16 A-resolution crystal structure of the deoxy-form tyrosinase from Streptomyces castaneoglobisporus in complex with the caddie protein
Descriptor:	COPPER (II) ION, MelC, NITRATE ION, ...
Authors:	Matoba, Y, Sugiyama, M.
Deposit date:	2017-12-19
Release date:	2018-12-26
Last modified:	2023-11-22
Method:	X-RAY DIFFRACTION (1.16 Å)
Cite:	Catalytic mechanism of tyrosinase implied from the quinone formation on the Tyr98 residue of the caddie protein To Be Published

5Z0J

Crystal structure of copper-bound tyrosinase from Streptomyces castaneoglobisporus in complex with the caddie protein obtained by soaking in the hydroxylamine-containing solution for 2 h at 277 K
Descriptor:	COPPER (II) ION, MelC, NITRATE ION, ...
Authors:	Matoba, Y, Sugiyama, M.
Deposit date:	2017-12-19
Release date:	2018-12-26
Last modified:	2023-11-22
Method:	X-RAY DIFFRACTION (1.35 Å)
Cite:	Catalytic mechanism of tyrosinase implied from the quinone formation on the Tyr98 residue of the caddie protein To Be Published

5Z0I

Crystal structure of copper-bound tyrosinase from Streptomyces castaneoglobisporus in complex with the caddie protein obtained by soaking in the hydroxylamine-containing solution for 1 h at 277 K
Descriptor:	COPPER (II) ION, MelC, NITRATE ION, ...
Authors:	Matoba, Y, Sugiyama, M.
Deposit date:	2017-12-19
Release date:	2018-12-26
Last modified:	2023-11-22
Method:	X-RAY DIFFRACTION (1.32 Å)
Cite:	Catalytic mechanism of tyrosinase implied from the quinone formation on the Tyr98 residue of the caddie protein To Be Published

5Z0H

Crystal structure of copper-bound tyrosinase from Streptomyces castaneoglobisporus in complex with the caddie protein obtained by soaking in the hydroxylamine-containing solution for 2 h at 298 K
Descriptor:	COPPER (II) ION, MelC, NITRATE ION, ...
Authors:	Matoba, Y, Sugiyama, M.
Deposit date:	2017-12-19
Release date:	2018-12-26
Last modified:	2023-11-22
Method:	X-RAY DIFFRACTION (1.18 Å)
Cite:	Catalytic mechanism of tyrosinase implied from the quinone formation on the Tyr98 residue of the caddie protein To Be Published

5Z0G

Crystal structure of copper-bound tyrosinase from Streptomyces castaneoglobisporus in complex with the caddie protein obtained by soaking in the hydroxylamine-containing solution for 20 min at 298 K
Descriptor:	COPPER (II) ION, MelC, NITRATE ION, ...
Authors:	Matoba, Y, Sugiyama, M.
Deposit date:	2017-12-19
Release date:	2018-12-26
Last modified:	2023-11-22
Method:	X-RAY DIFFRACTION (1.32 Å)
Cite:	Catalytic mechanism of tyrosinase implied from the quinone formation on the Tyr98 residue of the caddie protein To Be Published

2ZWF

Crystal structure of the copper-bound tyrosinase in complex with a caddie protein from streptomyces castaneoglobisporus obtained by soaking the deoxy-form crystal in dioxygen-saturated solution for 80 minutes
Descriptor:	COPPER (II) ION, MelC, NITRATE ION, ...
Authors:	Matoba, Y, Sugiyama, M.
Deposit date:	2008-12-03
Release date:	2009-12-15
Last modified:	2023-11-01
Method:	X-RAY DIFFRACTION (1.4 Å)
Cite:	Crystallographic evidence of drastic movement of a copper ion toward the substrate tyrosine for starting hydroxylation reaction of tyrosinase To be Published

3WA6

Crystal structure of tannase from Lactobacillus plantarum in the orthorhombic crystal
Descriptor:	SULFATE ION, tannase
Authors:	Matoba, Y, Tanaka, N, Sugiyama, M.
Deposit date:	2013-04-27
Release date:	2013-07-24
Last modified:	2024-03-20
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Crystallographic and mutational analyses of tannase from Lactobacillus plantarum Proteins, 81, 2013

2ZWE

Crystal structure of the copper-bound tyrosinase in complex with a caddie protein from streptomyces castaneoglobisporus obtained by soaking the deoxy-form crystal in dioxygen-saturated solution for 40 minutes
Descriptor:	COPPER (II) ION, MelC, NITRATE ION, ...
Authors:	Matoba, Y, Sugiyama, M.
Deposit date:	2008-12-03
Release date:	2009-12-15
Last modified:	2023-11-01
Method:	X-RAY DIFFRACTION (1.32 Å)
Cite:	Crystallographic evidence of drastic movement of a copper ion toward the substrate tyrosine for starting hydroxylation reaction of tyrosinase To be Published

2ZMY

Crystal structure of the met2-form of the copper-bound tyrosinase in complex with a caddie protein from Streptomyces castaneoglobisporus obtained by soaking in cupric sulfate solution for 80 hours
Descriptor:	CADDIE, COPPER (II) ION, NITRATE ION, ...
Authors:	Matoba, Y, Sugiyama, M.
Deposit date:	2008-04-21
Release date:	2009-05-05
Last modified:	2023-11-01
Method:	X-RAY DIFFRACTION (1.45 Å)
Cite:	X-Ray Snapshots of a Hydroxylation Mechanism of Tyrosinase To be Published

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