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7A6G
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BU of 7a6g by Molmil
Structural characterization of L-proline amide hydrolase from Pseudomonas syringae
Descriptor: PHOSPHATE ION, Putative Proline iminopeptidase
Authors:Martinez-Rodriguez, S, Gavira, J.A.
Deposit date:2020-08-25
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A New L-Proline Amide Hydrolase with Potential Application within the Amidase Process
Crystals, 12, 2022
3N5F
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BU of 3n5f by Molmil
Crystal Structure of L-N-carbamoylase from Geobacillus stearothermophilus CECT43
Descriptor: CACODYLATE ION, COBALT (II) ION, ISOPROPYL ALCOHOL, ...
Authors:Garcia-Pino, A, Martinez-Rodriguez, S, Gavira, J.A.
Deposit date:2010-05-25
Release date:2011-05-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Mutational and structural analysis of L-N-carbamoylase reveals new insights into a peptidase m20/m25/m40 family member.
J.Bacteriol., 194, 2012
8BV9
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BU of 8bv9 by Molmil
Acylphosphatase from E. coli
Descriptor: 1,2-ETHANEDIOL, Acylphosphatase, GLYCEROL, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2023-01-18
Release date:2023-10-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:First 3-D structural evidence of a native-like intertwined dimer in the acylphosphatase family.
Biochem.Biophys.Res.Commun., 682, 2023
5G3P
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BU of 5g3p by Molmil
Bacillus cereus formamidase (BceAmiF) acetylated at the active site.
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Gavira, J.A, Conejero-Muriel, M, Martinez-Rodriguez, S.
Deposit date:2016-04-29
Release date:2017-04-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:A novel cysteine carbamoyl-switch is responsible for the inhibition of formamidase, a nitrilase superfamily member.
Arch.Biochem.Biophys., 662, 2019
5G3O
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BU of 5g3o by Molmil
Bacillus cereus formamidase (BceAmiF) inhibited with urea.
Descriptor: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, DI(HYDROXYETHYL)ETHER, FORMAMIDASE, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S, Conejero-Muriel, M.
Deposit date:2016-04-29
Release date:2017-04-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A novel cysteine carbamoyl-switch is responsible for the inhibition of formamidase, a nitrilase superfamily member.
Arch.Biochem.Biophys., 662, 2019
3DC8
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BU of 3dc8 by Molmil
Crystal structure of dihydropyrimidinase from Sinorhizobium meliloti
Descriptor: ACETATE ION, Dihydropyrimidinase, GLYCEROL, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2008-06-03
Release date:2009-04-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of dihydropyrimidinase from Sinorhizobium meliloti CECT4114: new features in an amidohydrolase family member
J.Struct.Biol., 169, 2010
6G5Z
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BU of 6g5z by Molmil
Choline sulfatase from Ensifer (Sinorhizobium) meliloti
Descriptor: Choline-sulfatase, MAGNESIUM ION, SULFATE ION
Authors:Martinez-Rodriguez, S, Camara-Artigas, A.
Deposit date:2018-03-30
Release date:2019-04-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural insights into choline-O-sulfatase reveal the molecular determinants for ligand binding.
Acta Crystallogr D Struct Biol, 78, 2022
6G60
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BU of 6g60 by Molmil
Choline sulfatase from Ensifer (Sinorhizobium) meliloti cocrystalized with choline
Descriptor: CHOLINE ION, Choline-sulfatase, MAGNESIUM ION, ...
Authors:Martinez-Rodriguez, S, Camara-Artigas, A.
Deposit date:2018-03-30
Release date:2019-04-10
Last modified:2023-03-08
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural insights into choline-O-sulfatase reveal the molecular determinants for ligand binding.
Acta Crystallogr D Struct Biol, 78, 2022
3DIE
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BU of 3die by Molmil
Domain swapping of Staphylococcus Aureus thioredoxin W28A mutant
Descriptor: CADMIUM ION, FE (III) ION, Thioredoxin
Authors:Martinez-Rodriguez, S, Loris, R, Messens, J.
Deposit date:2008-06-20
Release date:2009-03-24
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Coupling of domain swapping to kinetic stability in a thioredoxin mutant
J.Mol.Biol., 385, 2009
8QME
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BU of 8qme by Molmil
Structural characterization of beta-xyloxidase XynB2 from Geobacillus stearothermophilus CECT43
Descriptor: ACETATE ION, Beta-xylosidase, GLYCEROL, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2023-09-22
Release date:2024-03-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Characterization of beta-Xylosidase XynB2 from Geobacillus stearothermophilus CECT43: A Member of the Glycoside Hydrolase Family GH52
Crystals, 14, 2024
7PTH
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BU of 7pth by Molmil
C54S mutant of choline-sulfatase from E. meliloti CECT4857 bound to choline
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2021-09-27
Release date:2022-08-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural insights into choline-O-sulfatase reveal the molecular determinants for ligand binding.
Acta Crystallogr D Struct Biol, 78, 2022
7PTJ
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BU of 7ptj by Molmil
C54S mutant of choline-sulfatase from E. meliloti CECT4857 bound to HEPES
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, Choline sulfatase, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2021-09-27
Release date:2022-08-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into choline-O-sulfatase reveal the molecular determinants for ligand binding.
Acta Crystallogr D Struct Biol, 78, 2022
4UHU
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BU of 4uhu by Molmil
W229D mutant of the last common ancestor of Gram-negative bacteria (GNCA) beta-lactamase class A
Descriptor: ACETATE ION, FORMIC ACID, GNCA LACTAMASE W229D
Authors:Gavira, J.A, Risso, V.A, Martinez-Rodriguez, S, Sanchez-Ruiz, J.M.
Deposit date:2015-03-25
Release date:2016-04-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.305 Å)
Cite:De novo active sites for resurrected Precambrian enzymes.
Nat Commun, 8, 2017
6YC5
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BU of 6yc5 by Molmil
RT structure of Thaumatin obtained at 1.35 A resolution from crystal grown in a Kapton microchip.
Descriptor: L(+)-TARTARIC ACID, SODIUM ION, Thaumatin-1
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2020-03-18
Release date:2020-08-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Attaining atomic resolution from in situ data collection at room temperature using counter-diffusion-based low-cost microchips.
Acta Crystallogr D Struct Biol, 76, 2020
6YBI
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BU of 6ybi by Molmil
RT structure of HEW Lysozyme obtained at 1.12 A resolution from crystal grown in a Mylar microchip.
Descriptor: CHLORIDE ION, Lysozyme, SODIUM ION
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2020-03-17
Release date:2020-08-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Attaining atomic resolution from in situ data collection at room temperature using counter-diffusion-based low-cost microchips.
Acta Crystallogr D Struct Biol, 76, 2020
6YBO
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BU of 6ybo by Molmil
RT structure of Glucose Isomerase obtained at 1.06 A resolution from crystal grown in a Kapton microchip.
Descriptor: MAGNESIUM ION, SODIUM ION, Xylose isomerase
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2020-03-17
Release date:2020-08-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Attaining atomic resolution from in situ data collection at room temperature using counter-diffusion-based low-cost microchips.
Acta Crystallogr D Struct Biol, 76, 2020
6YBX
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BU of 6ybx by Molmil
RT structure of Thaumatin obtained at 1.14 A resolution from crystal grown in a Mylar microchip.
Descriptor: L(+)-TARTARIC ACID, SODIUM ION, Thaumatin-1
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2020-03-18
Release date:2020-08-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Attaining atomic resolution from in situ data collection at room temperature using counter-diffusion-based low-cost microchips.
Acta Crystallogr D Struct Biol, 76, 2020
6YBR
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BU of 6ybr by Molmil
RT structure of Glucose Isomerase obtained at 1.20 A resolution from crystal grown in a Mylar microchip.
Descriptor: MAGNESIUM ION, SODIUM ION, Xylose isomerase
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2020-03-17
Release date:2020-08-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Attaining atomic resolution from in situ data collection at room temperature using counter-diffusion-based low-cost microchips.
Acta Crystallogr D Struct Biol, 76, 2020
6YBF
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BU of 6ybf by Molmil
RT structure of HEW Lysozyme obtained at 1.13 A resolution from crystal grown in a Kapton microchip.
Descriptor: CHLORIDE ION, Lysozyme, SODIUM ION
Authors:Gavira, J, Martinez-Rodriguez, S.
Deposit date:2020-03-17
Release date:2020-08-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Attaining atomic resolution from in situ data collection at room temperature using counter-diffusion-based low-cost microchips.
Acta Crystallogr D Struct Biol, 76, 2020
7APN
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BU of 7apn by Molmil
Structure of Lipase TL from bulk agarose grown crystal
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Lipase, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S, Fernande-Penas, R, Verdugo-Escamilla, C.
Deposit date:2020-10-19
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Production of Cross-Linked Lipase Crystals at a Preparative Scale.
Cryst.Growth Des., 21, 2021
7APP
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BU of 7app by Molmil
Structure of Lipase TL from capillary grown crystal in the presence of agarose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FORMIC ACID, Lipase, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S, Fernande-Penas, R, Verdugo-Escamilla, C.
Deposit date:2020-10-19
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Production of Cross-Linked Lipase Crystals at a Preparative Scale.
Cryst.Growth Des., 21, 2021
6YRS
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BU of 6yrs by Molmil
Structure of a new variant of GNCA ancestral beta-lactamase
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Gavira, J.A, Risso, V, Martinez-Rodriguez, S, Sanchez-Ruiz, J.M, Modi, T, Ozkan, S.B.
Deposit date:2020-04-20
Release date:2021-03-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Hinge-shift mechanism as a protein design principle for the evolution of beta-lactamases from substrate promiscuity to specificity.
Nat Commun, 12, 2021
4HX3
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BU of 4hx3 by Molmil
Crystal structure of Streptomyces caespitosus sermetstatin in complex with S. caespitosus snapalysin
Descriptor: Extracellular small neutral protease, GLYCEROL, Neutral proteinase inhibitor ScNPI, ...
Authors:Trillo-Muyo, S, Martinez-Rodriguez, S, Arolas, J.L, Gomis-Ruth, F.X.
Deposit date:2012-11-09
Release date:2012-12-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mechanism of action of a Janus-faced single-domain protein inhibitor simultaneously targeting two peptidase classes
CHEM SCI, 4, 2013
3EAK
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BU of 3eak by Molmil
NbBCII10 humanized (FGLA mutant)
Descriptor: NbBCII10-FGLA, SULFATE ION
Authors:Vincke, C, Loris, R, Saerens, D, Martinez-Rodriguez, S, Muyldermans, S, Conrath, K.
Deposit date:2008-08-26
Release date:2008-12-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:General strategy to humanize a camelid single-domain antibody and identification of a universal humanized nanobody scaffold.
J.Biol.Chem., 2008
3EBA
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BU of 3eba by Molmil
CAbHul6 FGLW mutant (humanized) in complex with human lysozyme
Descriptor: CAbHul6, Lysozyme C, SULFATE ION
Authors:Loris, R, Vincke, C, Saerens, D, Martinez-Rodriguez, S, Muyldermans, S, Conrath, K.
Deposit date:2008-08-27
Release date:2008-12-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:General Strategy to Humanize a Camelid Single-domain Antibody and Identification of a Universal Humanized Nanobody Scaffold
J.Biol.Chem., 284, 2009

 

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