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1Z5T
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BU of 1z5t by Molmil
Crystal Structure of [d(CGCGAA(Z3dU)(Z3dU)CGCG)]2, Z3dU:5-(3-aminopropyl)-2'-deoxyuridine, in presence of thallium I.
Descriptor: 5'-D(*CP*GP*CP*GP*AP*AP*(ZDU)P*(ZDU)P*CP*GP*CP*G)-3', SPERMINE, THALLIUM (I) ION
Authors:Moulaei, T, Maehigashi, T, Lountos, G.T, Komeda, S, Watkins, D, Stone, M.P, Marky, L.A, Li, J.S, Gold, B, Williams, L.D.
Deposit date:2005-03-19
Release date:2005-07-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of B-DNA with cations tethered in the major groove.
Biochemistry, 44, 2005
1RDE
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BU of 1rde by Molmil
NMR structure of the thrombin-binding DNA aptamer stabilized by Sr2+
Descriptor: Thrombin-binding DNA aptamer
Authors:Mao, X, Marky, L.A, Gmeiner, W.H.
Deposit date:2003-11-05
Release date:2003-11-11
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:NMR structure of the thrombin-binding DNA aptamer stabilized by Sr2+.
J.Biomol.Struct.Dyn., 22, 2004
3OPI
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BU of 3opi by Molmil
7-DEAZA-2'-DEOXYADENOSINE modification in B-FORM DNA
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*(7DA)P*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, SODIUM ION
Authors:Kowal, E.A, Ganguly, M, Pallan, P.S, Marky, L.A, Gold, B, Egli, M, Stone, M.P.
Deposit date:2010-09-01
Release date:2011-08-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Altering the Electrostatic Potential in the Major Groove: Thermodynamic and Structural Characterization of 7-Deaza-2'-deoxyadenosine:dT Base Pairing in DNA.
J.Phys.Chem.B, 115, 2011
2QEG
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BU of 2qeg by Molmil
B-DNA with 7-deaza-dG modification
Descriptor: DNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DAP*DTP*DTP*DCP*(7GU)P*DCP*DG)-3')
Authors:Wang, F, Li, F, Ganguly, M, Marky, L.A, Gold, B, Egli, M, Stone, M.P.
Deposit date:2007-06-25
Release date:2008-05-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A bridging water anchors the tethered 5-(3-aminopropyl)-2'-deoxyuridine amine in the DNA major groove proximate to the N+2 C.G base pair: implications for formation of interstrand 5'-GNC-3' cross-links by nitrogen mustards.
Biochemistry, 47, 2008
2QEF
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BU of 2qef by Molmil
X-ray structure of 7-deaza-dG and Z3dU modified duplex CGCGAATXCZCG
Descriptor: DNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DAP*DTP*(ZDU)P*DCP*(7GU)P*DCP*DG)-3')
Authors:Wang, F, Li, F, Ganguly, M, Marky, L.A, Gold, B, Egli, M, Stone, M.P.
Deposit date:2007-06-25
Release date:2008-05-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A bridging water anchors the tethered 5-(3-aminopropyl)-2'-deoxyuridine amine in the DNA major groove proximate to the N+2 C.G base pair: implications for formation of interstrand 5'-GNC-3' cross-links by nitrogen mustards.
Biochemistry, 47, 2008
1MFJ
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BU of 1mfj by Molmil
3' Stem-Loop from Human U4 SNRNA
Descriptor: 5'-R(*GP*AP*CP*AP*GP*UP*CP*UP*CP*UP*AP*CP*GP*GP*AP*GP*AP*CP*UP*G)-3'
Authors:Comolli, L.R, Ulyanov, N.B, James, T.L, Gmeiner, W.H.
Deposit date:2002-08-11
Release date:2002-11-06
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:NMR Structure of the 3' Stem-Loop from Human U4 snRNA
Nucleic Acids Res., 30, 2002
4F95
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BU of 4f95 by Molmil
Crystal structure of human inosine triphosphate pyrophosphatase P32T variant
Descriptor: Inosine triphosphate pyrophosphatase
Authors:Simone, P.D, Pavlov, Y.I, Borgstahl, G.E.O.
Deposit date:2012-05-18
Release date:2013-04-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:The human ITPA polymorphic variant P32T is destabilized by the unpacking of the hydrophobic core.
J.Struct.Biol., 182, 2013

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